Computational biology and genome informatics /:
This study contains articles written by experts on a wide range of topics that are associated with the analysis and management of biological information at the molecular level. It contains chapters on RNA and protein structure analysis, DNA computing, sequence mapping, genome comparison, gene expres...
Gespeichert in:
Weitere Verfasser: | , , |
---|---|
Format: | Elektronisch E-Book |
Sprache: | English |
Veröffentlicht: |
New Jersey :
World Scientific,
©2003.
|
Schlagworte: | |
Online-Zugang: | DE-862 DE-863 |
Zusammenfassung: | This study contains articles written by experts on a wide range of topics that are associated with the analysis and management of biological information at the molecular level. It contains chapters on RNA and protein structure analysis, DNA computing, sequence mapping, genome comparison, gene expression data mining, metabolic network modelling, and phyloinformatics. The important work of some representative researchers in bioinformatics is brought together. The topic is treated in depth and is related to, where applicable, other emerging technologies such as data mining and visualization. The goal of the work is to introduce readers to the principle techniques of bioinformatics in the hope that they will build on them to make new discoveries of their own. |
Beschreibung: | 1 online resource (viii, 257 pages) : illustrations (some color) |
Bibliographie: | Includes bibliographical references and index. |
ISBN: | 9812382577 9789812382573 9812564497 9789812564498 1281347736 9781281347732 9786611347734 6611347739 |
Internformat
MARC
LEADER | 00000cam a2200000 a 4500 | ||
---|---|---|---|
001 | ZDB-4-EBA-ocm70738403 | ||
003 | OCoLC | ||
005 | 20250103110447.0 | ||
006 | m o d | ||
007 | cr cn||||||||| | ||
008 | 030521s2003 njua ob 001 0 eng d | ||
010 | |z 2003544795 | ||
040 | |a REDDC |b eng |e pn |c REDDC |d OCLCQ |d N$T |d YDXCP |d IDEBK |d DKDLA |d OCLCQ |d ADU |d E7B |d OCLCQ |d OCLCF |d OCLCO |d OCLCQ |d SLY |d NLGGC |d OCLCQ |d EBLCP |d MHW |d OCLCQ |d AZK |d JBG |d LOA |d OCLCO |d COCUF |d AGLDB |d MOR |d OCLCO |d PIFBR |d ZCU |d OCLCO |d OCLCQ |d MERUC |d OCLCO |d OCLCQ |d OCLCO |d OCLCA |d U3W |d OCLCA |d STF |d WRM |d VTS |d NRAMU |d ICG |d REC |d INT |d VT2 |d AU@ |d OCLCQ |d OCLCO |d OCLCA |d OCLCQ |d G3B |d DKC |d OCLCQ |d OCLCO |d UKAHL |d K6U |d OCLCA |d UKCRE |d VLY |d OCLCO |d OCLCQ |d INARC |d OCLCO |d OCLCL |d SXB |d OCLCQ |d OCLCO |d CLOUD | ||
019 | |a 60716206 |a 144553556 |a 474641168 |a 475941284 |a 476091471 |a 614785040 |a 646733902 |a 722370367 |a 748525327 |a 815568159 |a 872052128 |a 880329523 |a 888717608 |a 961636544 |a 962596264 |a 966232048 |a 988511791 |a 991959860 |a 1037752747 |a 1038641165 |a 1045520287 |a 1055355359 |a 1081277419 |a 1153525573 |a 1162532918 |a 1228539886 |a 1241942214 |a 1290117316 |a 1300484862 |a 1393052111 | ||
020 | |a 9812382577 | ||
020 | |a 9789812382573 | ||
020 | |a 9812564497 |q (electronic bk.) | ||
020 | |a 9789812564498 |q (electronic bk.) | ||
020 | |a 1281347736 | ||
020 | |a 9781281347732 | ||
020 | |a 9786611347734 | ||
020 | |a 6611347739 | ||
035 | |a (OCoLC)70738403 |z (OCoLC)60716206 |z (OCoLC)144553556 |z (OCoLC)474641168 |z (OCoLC)475941284 |z (OCoLC)476091471 |z (OCoLC)614785040 |z (OCoLC)646733902 |z (OCoLC)722370367 |z (OCoLC)748525327 |z (OCoLC)815568159 |z (OCoLC)872052128 |z (OCoLC)880329523 |z (OCoLC)888717608 |z (OCoLC)961636544 |z (OCoLC)962596264 |z (OCoLC)966232048 |z (OCoLC)988511791 |z (OCoLC)991959860 |z (OCoLC)1037752747 |z (OCoLC)1038641165 |z (OCoLC)1045520287 |z (OCoLC)1055355359 |z (OCoLC)1081277419 |z (OCoLC)1153525573 |z (OCoLC)1162532918 |z (OCoLC)1228539886 |z (OCoLC)1241942214 |z (OCoLC)1290117316 |z (OCoLC)1300484862 |z (OCoLC)1393052111 | ||
050 | 4 | |a QH324.2 |b .C635 2003eb | |
072 | 7 | |a NAT |x 027000 |2 bisacsh | |
072 | 7 | |a SCI |x 086000 |2 bisacsh | |
072 | 7 | |a SCI |x 008000 |2 bisacsh | |
072 | 7 | |a PSD |2 bicssc | |
082 | 7 | |a 570.285 |2 22 | |
084 | |a Q343. 1-3 |2 clc | ||
084 | |a Q7-3 |2 clc | ||
049 | |a MAIN | ||
245 | 0 | 0 | |a Computational biology and genome informatics / |c editors, Jason T.L. Wang, Cathy H. Wu, Paul P. Wang. |
260 | |a New Jersey : |b World Scientific, |c ©2003. | ||
300 | |a 1 online resource (viii, 257 pages) : |b illustrations (some color) | ||
336 | |a text |b txt |2 rdacontent | ||
337 | |a computer |b c |2 rdamedia | ||
338 | |a online resource |b cr |2 rdacarrier | ||
347 | |a data file | ||
505 | 0 | |a Cover -- Preface -- Contents -- Chapter 1 Exploring RNA Intermediate Conformations with the Massively Parallel Genetic Algorithm -- 1.1 Introduction -- 1.2 Algorithmic Implementation -- Population -- Basic Algorithm -- Additional Features -- 1.3 Data Generation and Analysis -- Exemplary Biological Systems -- Population Dynamics and Interactive Visualization -- Stem Trace and Structurelab -- Single Run Analysis -- Multiple Run Analysis -- Multiple Population Size Analysis -- 1.4 Biological Application -- PSTVd -- hok/sok -- 1.5 Conclusions -- Acknowledgment -- References -- Authors' Addresses -- Chapter 2 Introduction to Self-Assembling DNA Nanostructures for Computation and Nanofabrication -- 2.1 Introduction -- 2.2 Background -- Chemistry and Biology of DNA -- DNA as a Structural Material -- Design of Base Sequences for DNA Nanoconstruction -- 2.3 Experiments and Applications -- DNA-based Computation -- Algorithmic Self-Assembly -- Patterned DNA Nanostructures -- Patterned Immobilization of Other Materials on DNA Arrays -- 2.4 Summary and Future Directions -- Possible Future Applications -- Acknowledgments -- References -- Author's Address -- Chapter 3 Mapping Sequence to Rice FPC -- 3.1 Introduction -- 3.2 Overview of FPC -- 3.3 Mapping Sequence to FPC contigs -- FSD (FPC Simulated Digest) -- BSS (BLAST Some Sequence) -- Merging contigs -- Anchoring contigs -- WebFPC -- 3.4 Discussion -- Acknowledgments -- References -- Authors' Addresses -- Chapter 4 Graph Theoretic Sequence Clustering Algorithms and Their Applications to Genome Comparison -- 4.1 Introduction -- 4.1.1 Database search as a genome annotation tool -- 4.1.2 Clustering algorithms as a genome annotation tool -- 4.2 Preliminaries -- 4.3 Sequence Clustering Algorithms Based on Graph Theory -- 4.3.1 Matsuda, Ishihara, and Hashimoto algorithm -- 4.3.2 Matsuda algorithm -- 4.3.3 COG: cluster of orthologous groups -- 4.3.4 GeneRAGE -- 4.4 A New Graph Theoretic Sequence Clustering Algorithm -- 4.4.1 The basic algorithm -- 4.4.2 Result from application of the basic algorithm -- 4.5 BAG: The Extended Clustering Algorithm -- 4.5.1 Issues with the basic algorithm -- 4.5.2 Setting the cutoff threshold -- 4.5.3 The overview of the extended algorithm -- 4.5.4 AP-TEST -- 4.5.5 RANGE-TEST -- 4.5.6 HYPERGRAPH-MERGE -- 4.5.7 The Algorithm -- 4.6 Implementation -- 4.7 Application to Genome Comparison -- 4.7.1 Splitting families -- 4.7.2 Merging families -- 4.8 Conclusion -- Acknowledgments -- References -- Author's Address -- Chapter 5 The Protein Information Resource for Functional Genomics and Proteomics -- 5.1 Introduction -- 5.2 PIR-International Protein Sequence Database -- Superfamily Classification -- Evidence Attribution and Bibliography Submission -- 5.3 PIR Non-Redundant Refence Protein Database -- 5.4 Integrated Protein Classification Database -- 5.5 PIR System Distribution -- PIR Web Access -- PIR FTP Transfer -- 5.6 Conclusion -- Acknowledgments -- References -- Author's Address -- Chapter 6 High-Grade Ore for Data Mining in 3D Structures -- 6.1 Introduction -- 6.2 Traditional Quality Measures -- 6.3 All-Atom Contacts for Assessing Structural Accuracy -- 6.4. | |
520 | |a This study contains articles written by experts on a wide range of topics that are associated with the analysis and management of biological information at the molecular level. It contains chapters on RNA and protein structure analysis, DNA computing, sequence mapping, genome comparison, gene expression data mining, metabolic network modelling, and phyloinformatics. The important work of some representative researchers in bioinformatics is brought together. The topic is treated in depth and is related to, where applicable, other emerging technologies such as data mining and visualization. The goal of the work is to introduce readers to the principle techniques of bioinformatics in the hope that they will build on them to make new discoveries of their own. | ||
588 | 0 | |a Print version record. | |
504 | |a Includes bibliographical references and index. | ||
546 | |a English. | ||
650 | 0 | |a Computational biology. |0 http://id.loc.gov/authorities/subjects/sh2003008355 | |
650 | 0 | |a Genetics |x Mathematical models. |0 http://id.loc.gov/authorities/subjects/sh85053879 | |
650 | 0 | |a Genomics. |0 http://id.loc.gov/authorities/subjects/sh2002000809 | |
650 | 2 | |a Computational Biology |x methods | |
650 | 2 | |a Genomics |x methods | |
650 | 2 | |a Proteomics |x methods | |
650 | 2 | |a Computational Biology |0 https://id.nlm.nih.gov/mesh/D019295 | |
650 | 2 | |a Genomics |0 https://id.nlm.nih.gov/mesh/D023281 | |
650 | 6 | |a Bio-informatique. | |
650 | 6 | |a Génomique. | |
650 | 7 | |a NATURE |x Reference. |2 bisacsh | |
650 | 7 | |a SCIENCE |x Life Sciences |x General. |2 bisacsh | |
650 | 7 | |a SCIENCE |x Life Sciences |x Biology. |2 bisacsh | |
650 | 0 | 7 | |a Genetics |x Mathematical models. |2 cct |
650 | 0 | 7 | |a Genomics. |2 cct |
650 | 0 | 7 | |a Computational Biology |x methods. |2 cct |
650 | 0 | 7 | |a Genomics |x methods. |2 cct |
650 | 0 | 7 | |a Proteomics |x methods. |2 cct |
650 | 0 | 7 | |a Computational Biology. |2 cct |
650 | 7 | |a Computational biology |2 fast | |
650 | 7 | |a Genetics |x Mathematical models |2 fast | |
650 | 7 | |a Genomics |2 fast | |
655 | 0 | |a Electronic books. | |
700 | 1 | |a Wang, Jason T. L. |1 https://id.oclc.org/worldcat/entity/E39PCjCbcWVjvYGhpPCMgJX7h3 |0 http://id.loc.gov/authorities/names/n98038837 | |
700 | 1 | |a Wu, Cathy H. |1 https://id.oclc.org/worldcat/entity/E39PCjMvmWkqCFh7FGk38RRBj3 |0 http://id.loc.gov/authorities/names/n2003008664 | |
700 | 1 | |a Wang, Paul P. |1 https://id.oclc.org/worldcat/entity/E39PCjt4ggcGrHbty8jTBrX68C |0 http://id.loc.gov/authorities/names/n80091033 | |
758 | |i has work: |a Computational biology and genome informatics (Text) |1 https://id.oclc.org/worldcat/entity/E39PCGhpvVT7v6tRdPr7m6p96q |4 https://id.oclc.org/worldcat/ontology/hasWork | ||
776 | 0 | 8 | |i Print version: |t Computational biology and genome informatics. |d New Jersey : World Scientific, ©2003 |z 9812382577 |w (DLC) 2003544795 |w (OCoLC)52799518 |
966 | 4 | 0 | |l DE-862 |p ZDB-4-EBA |q FWS_PDA_EBA |u https://search.ebscohost.com/login.aspx?direct=true&scope=site&db=nlebk&AN=134081 |3 Volltext |
966 | 4 | 0 | |l DE-863 |p ZDB-4-EBA |q FWS_PDA_EBA |u https://search.ebscohost.com/login.aspx?direct=true&scope=site&db=nlebk&AN=134081 |3 Volltext |
936 | |a BATCHLOAD | ||
938 | |a cloudLibrary |b CLDL |n 9789812564498 | ||
938 | |a Askews and Holts Library Services |b ASKH |n AH21190635 | ||
938 | |a EBL - Ebook Library |b EBLB |n EBL234360 | ||
938 | |a ebrary |b EBRY |n ebr10083762 | ||
938 | |a EBSCOhost |b EBSC |n 134081 | ||
938 | |a ProQuest MyiLibrary Digital eBook Collection |b IDEB |n 134773 | ||
938 | |a YBP Library Services |b YANK |n 2407670 | ||
938 | |a Internet Archive |b INAR |n isbn_9789812382573 | ||
994 | |a 92 |b GEBAY | ||
912 | |a ZDB-4-EBA | ||
049 | |a DE-862 | ||
049 | |a DE-863 |
Datensatz im Suchindex
DE-BY-FWS_katkey | ZDB-4-EBA-ocm70738403 |
---|---|
_version_ | 1829094602377789440 |
adam_text | |
any_adam_object | |
author2 | Wang, Jason T. L. Wu, Cathy H. Wang, Paul P. |
author2_role | |
author2_variant | j t l w jtl jtlw c h w ch chw p p w pp ppw |
author_GND | http://id.loc.gov/authorities/names/n98038837 http://id.loc.gov/authorities/names/n2003008664 http://id.loc.gov/authorities/names/n80091033 |
author_facet | Wang, Jason T. L. Wu, Cathy H. Wang, Paul P. |
author_sort | Wang, Jason T. L. |
building | Verbundindex |
bvnumber | localFWS |
callnumber-first | Q - Science |
callnumber-label | QH324 |
callnumber-raw | QH324.2 .C635 2003eb |
callnumber-search | QH324.2 .C635 2003eb |
callnumber-sort | QH 3324.2 C635 42003EB |
callnumber-subject | QH - Natural History and Biology |
collection | ZDB-4-EBA |
contents | Cover -- Preface -- Contents -- Chapter 1 Exploring RNA Intermediate Conformations with the Massively Parallel Genetic Algorithm -- 1.1 Introduction -- 1.2 Algorithmic Implementation -- Population -- Basic Algorithm -- Additional Features -- 1.3 Data Generation and Analysis -- Exemplary Biological Systems -- Population Dynamics and Interactive Visualization -- Stem Trace and Structurelab -- Single Run Analysis -- Multiple Run Analysis -- Multiple Population Size Analysis -- 1.4 Biological Application -- PSTVd -- hok/sok -- 1.5 Conclusions -- Acknowledgment -- References -- Authors' Addresses -- Chapter 2 Introduction to Self-Assembling DNA Nanostructures for Computation and Nanofabrication -- 2.1 Introduction -- 2.2 Background -- Chemistry and Biology of DNA -- DNA as a Structural Material -- Design of Base Sequences for DNA Nanoconstruction -- 2.3 Experiments and Applications -- DNA-based Computation -- Algorithmic Self-Assembly -- Patterned DNA Nanostructures -- Patterned Immobilization of Other Materials on DNA Arrays -- 2.4 Summary and Future Directions -- Possible Future Applications -- Acknowledgments -- References -- Author's Address -- Chapter 3 Mapping Sequence to Rice FPC -- 3.1 Introduction -- 3.2 Overview of FPC -- 3.3 Mapping Sequence to FPC contigs -- FSD (FPC Simulated Digest) -- BSS (BLAST Some Sequence) -- Merging contigs -- Anchoring contigs -- WebFPC -- 3.4 Discussion -- Acknowledgments -- References -- Authors' Addresses -- Chapter 4 Graph Theoretic Sequence Clustering Algorithms and Their Applications to Genome Comparison -- 4.1 Introduction -- 4.1.1 Database search as a genome annotation tool -- 4.1.2 Clustering algorithms as a genome annotation tool -- 4.2 Preliminaries -- 4.3 Sequence Clustering Algorithms Based on Graph Theory -- 4.3.1 Matsuda, Ishihara, and Hashimoto algorithm -- 4.3.2 Matsuda algorithm -- 4.3.3 COG: cluster of orthologous groups -- 4.3.4 GeneRAGE -- 4.4 A New Graph Theoretic Sequence Clustering Algorithm -- 4.4.1 The basic algorithm -- 4.4.2 Result from application of the basic algorithm -- 4.5 BAG: The Extended Clustering Algorithm -- 4.5.1 Issues with the basic algorithm -- 4.5.2 Setting the cutoff threshold -- 4.5.3 The overview of the extended algorithm -- 4.5.4 AP-TEST -- 4.5.5 RANGE-TEST -- 4.5.6 HYPERGRAPH-MERGE -- 4.5.7 The Algorithm -- 4.6 Implementation -- 4.7 Application to Genome Comparison -- 4.7.1 Splitting families -- 4.7.2 Merging families -- 4.8 Conclusion -- Acknowledgments -- References -- Author's Address -- Chapter 5 The Protein Information Resource for Functional Genomics and Proteomics -- 5.1 Introduction -- 5.2 PIR-International Protein Sequence Database -- Superfamily Classification -- Evidence Attribution and Bibliography Submission -- 5.3 PIR Non-Redundant Refence Protein Database -- 5.4 Integrated Protein Classification Database -- 5.5 PIR System Distribution -- PIR Web Access -- PIR FTP Transfer -- 5.6 Conclusion -- Acknowledgments -- References -- Author's Address -- Chapter 6 High-Grade Ore for Data Mining in 3D Structures -- 6.1 Introduction -- 6.2 Traditional Quality Measures -- 6.3 All-Atom Contacts for Assessing Structural Accuracy -- 6.4. |
ctrlnum | (OCoLC)70738403 |
dewey-full | 570.285 |
dewey-hundreds | 500 - Natural sciences and mathematics |
dewey-ones | 570 - Biology |
dewey-raw | 570.285 |
dewey-search | 570.285 |
dewey-sort | 3570.285 |
dewey-tens | 570 - Biology |
discipline | Biologie |
format | Electronic eBook |
fullrecord | <?xml version="1.0" encoding="UTF-8"?><collection xmlns="http://www.loc.gov/MARC21/slim"><record><leader>09236cam a2200961 a 4500</leader><controlfield tag="001">ZDB-4-EBA-ocm70738403 </controlfield><controlfield tag="003">OCoLC</controlfield><controlfield tag="005">20250103110447.0</controlfield><controlfield tag="006">m o d </controlfield><controlfield tag="007">cr cn|||||||||</controlfield><controlfield tag="008">030521s2003 njua ob 001 0 eng d</controlfield><datafield tag="010" ind1=" " ind2=" "><subfield code="z"> 2003544795</subfield></datafield><datafield tag="040" ind1=" " ind2=" "><subfield code="a">REDDC</subfield><subfield code="b">eng</subfield><subfield code="e">pn</subfield><subfield code="c">REDDC</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">N$T</subfield><subfield code="d">YDXCP</subfield><subfield code="d">IDEBK</subfield><subfield code="d">DKDLA</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">ADU</subfield><subfield code="d">E7B</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">OCLCF</subfield><subfield code="d">OCLCO</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">SLY</subfield><subfield code="d">NLGGC</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">EBLCP</subfield><subfield code="d">MHW</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">AZK</subfield><subfield code="d">JBG</subfield><subfield code="d">LOA</subfield><subfield code="d">OCLCO</subfield><subfield code="d">COCUF</subfield><subfield code="d">AGLDB</subfield><subfield code="d">MOR</subfield><subfield code="d">OCLCO</subfield><subfield code="d">PIFBR</subfield><subfield code="d">ZCU</subfield><subfield code="d">OCLCO</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">MERUC</subfield><subfield code="d">OCLCO</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">OCLCO</subfield><subfield code="d">OCLCA</subfield><subfield code="d">U3W</subfield><subfield code="d">OCLCA</subfield><subfield code="d">STF</subfield><subfield code="d">WRM</subfield><subfield code="d">VTS</subfield><subfield code="d">NRAMU</subfield><subfield code="d">ICG</subfield><subfield code="d">REC</subfield><subfield code="d">INT</subfield><subfield code="d">VT2</subfield><subfield code="d">AU@</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">OCLCO</subfield><subfield code="d">OCLCA</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">G3B</subfield><subfield code="d">DKC</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">OCLCO</subfield><subfield code="d">UKAHL</subfield><subfield code="d">K6U</subfield><subfield code="d">OCLCA</subfield><subfield code="d">UKCRE</subfield><subfield code="d">VLY</subfield><subfield code="d">OCLCO</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">INARC</subfield><subfield code="d">OCLCO</subfield><subfield code="d">OCLCL</subfield><subfield code="d">SXB</subfield><subfield code="d">OCLCQ</subfield><subfield code="d">OCLCO</subfield><subfield code="d">CLOUD</subfield></datafield><datafield tag="019" ind1=" " ind2=" "><subfield code="a">60716206</subfield><subfield code="a">144553556</subfield><subfield code="a">474641168</subfield><subfield code="a">475941284</subfield><subfield code="a">476091471</subfield><subfield code="a">614785040</subfield><subfield code="a">646733902</subfield><subfield code="a">722370367</subfield><subfield code="a">748525327</subfield><subfield code="a">815568159</subfield><subfield code="a">872052128</subfield><subfield code="a">880329523</subfield><subfield code="a">888717608</subfield><subfield code="a">961636544</subfield><subfield code="a">962596264</subfield><subfield code="a">966232048</subfield><subfield code="a">988511791</subfield><subfield code="a">991959860</subfield><subfield code="a">1037752747</subfield><subfield code="a">1038641165</subfield><subfield code="a">1045520287</subfield><subfield code="a">1055355359</subfield><subfield code="a">1081277419</subfield><subfield code="a">1153525573</subfield><subfield code="a">1162532918</subfield><subfield code="a">1228539886</subfield><subfield code="a">1241942214</subfield><subfield code="a">1290117316</subfield><subfield code="a">1300484862</subfield><subfield code="a">1393052111</subfield></datafield><datafield tag="020" ind1=" " ind2=" "><subfield code="a">9812382577</subfield></datafield><datafield tag="020" ind1=" " ind2=" "><subfield code="a">9789812382573</subfield></datafield><datafield tag="020" ind1=" " ind2=" "><subfield code="a">9812564497</subfield><subfield code="q">(electronic bk.)</subfield></datafield><datafield tag="020" ind1=" " ind2=" "><subfield code="a">9789812564498</subfield><subfield code="q">(electronic bk.)</subfield></datafield><datafield tag="020" ind1=" " ind2=" "><subfield code="a">1281347736</subfield></datafield><datafield tag="020" ind1=" " ind2=" "><subfield code="a">9781281347732</subfield></datafield><datafield tag="020" ind1=" " ind2=" "><subfield code="a">9786611347734</subfield></datafield><datafield tag="020" ind1=" " ind2=" "><subfield code="a">6611347739</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(OCoLC)70738403</subfield><subfield code="z">(OCoLC)60716206</subfield><subfield code="z">(OCoLC)144553556</subfield><subfield code="z">(OCoLC)474641168</subfield><subfield code="z">(OCoLC)475941284</subfield><subfield code="z">(OCoLC)476091471</subfield><subfield code="z">(OCoLC)614785040</subfield><subfield code="z">(OCoLC)646733902</subfield><subfield code="z">(OCoLC)722370367</subfield><subfield code="z">(OCoLC)748525327</subfield><subfield code="z">(OCoLC)815568159</subfield><subfield code="z">(OCoLC)872052128</subfield><subfield code="z">(OCoLC)880329523</subfield><subfield code="z">(OCoLC)888717608</subfield><subfield code="z">(OCoLC)961636544</subfield><subfield code="z">(OCoLC)962596264</subfield><subfield code="z">(OCoLC)966232048</subfield><subfield code="z">(OCoLC)988511791</subfield><subfield code="z">(OCoLC)991959860</subfield><subfield code="z">(OCoLC)1037752747</subfield><subfield code="z">(OCoLC)1038641165</subfield><subfield code="z">(OCoLC)1045520287</subfield><subfield code="z">(OCoLC)1055355359</subfield><subfield code="z">(OCoLC)1081277419</subfield><subfield code="z">(OCoLC)1153525573</subfield><subfield code="z">(OCoLC)1162532918</subfield><subfield code="z">(OCoLC)1228539886</subfield><subfield code="z">(OCoLC)1241942214</subfield><subfield code="z">(OCoLC)1290117316</subfield><subfield code="z">(OCoLC)1300484862</subfield><subfield code="z">(OCoLC)1393052111</subfield></datafield><datafield tag="050" ind1=" " ind2="4"><subfield code="a">QH324.2</subfield><subfield code="b">.C635 2003eb</subfield></datafield><datafield tag="072" ind1=" " ind2="7"><subfield code="a">NAT</subfield><subfield code="x">027000</subfield><subfield code="2">bisacsh</subfield></datafield><datafield tag="072" ind1=" " ind2="7"><subfield code="a">SCI</subfield><subfield code="x">086000</subfield><subfield code="2">bisacsh</subfield></datafield><datafield tag="072" ind1=" " ind2="7"><subfield code="a">SCI</subfield><subfield code="x">008000</subfield><subfield code="2">bisacsh</subfield></datafield><datafield tag="072" ind1=" " ind2="7"><subfield code="a">PSD</subfield><subfield code="2">bicssc</subfield></datafield><datafield tag="082" ind1="7" ind2=" "><subfield code="a">570.285</subfield><subfield code="2">22</subfield></datafield><datafield tag="084" ind1=" " ind2=" "><subfield code="a">Q343. 1-3</subfield><subfield code="2">clc</subfield></datafield><datafield tag="084" ind1=" " ind2=" "><subfield code="a">Q7-3</subfield><subfield code="2">clc</subfield></datafield><datafield tag="049" ind1=" " ind2=" "><subfield code="a">MAIN</subfield></datafield><datafield tag="245" ind1="0" ind2="0"><subfield code="a">Computational biology and genome informatics /</subfield><subfield code="c">editors, Jason T.L. Wang, Cathy H. Wu, Paul P. Wang.</subfield></datafield><datafield tag="260" ind1=" " ind2=" "><subfield code="a">New Jersey :</subfield><subfield code="b">World Scientific,</subfield><subfield code="c">©2003.</subfield></datafield><datafield tag="300" ind1=" " ind2=" "><subfield code="a">1 online resource (viii, 257 pages) :</subfield><subfield code="b">illustrations (some color)</subfield></datafield><datafield tag="336" ind1=" " ind2=" "><subfield code="a">text</subfield><subfield code="b">txt</subfield><subfield code="2">rdacontent</subfield></datafield><datafield tag="337" ind1=" " ind2=" "><subfield code="a">computer</subfield><subfield code="b">c</subfield><subfield code="2">rdamedia</subfield></datafield><datafield tag="338" ind1=" " ind2=" "><subfield code="a">online resource</subfield><subfield code="b">cr</subfield><subfield code="2">rdacarrier</subfield></datafield><datafield tag="347" ind1=" " ind2=" "><subfield code="a">data file</subfield></datafield><datafield tag="505" ind1="0" ind2=" "><subfield code="a">Cover -- Preface -- Contents -- Chapter 1 Exploring RNA Intermediate Conformations with the Massively Parallel Genetic Algorithm -- 1.1 Introduction -- 1.2 Algorithmic Implementation -- Population -- Basic Algorithm -- Additional Features -- 1.3 Data Generation and Analysis -- Exemplary Biological Systems -- Population Dynamics and Interactive Visualization -- Stem Trace and Structurelab -- Single Run Analysis -- Multiple Run Analysis -- Multiple Population Size Analysis -- 1.4 Biological Application -- PSTVd -- hok/sok -- 1.5 Conclusions -- Acknowledgment -- References -- Authors' Addresses -- Chapter 2 Introduction to Self-Assembling DNA Nanostructures for Computation and Nanofabrication -- 2.1 Introduction -- 2.2 Background -- Chemistry and Biology of DNA -- DNA as a Structural Material -- Design of Base Sequences for DNA Nanoconstruction -- 2.3 Experiments and Applications -- DNA-based Computation -- Algorithmic Self-Assembly -- Patterned DNA Nanostructures -- Patterned Immobilization of Other Materials on DNA Arrays -- 2.4 Summary and Future Directions -- Possible Future Applications -- Acknowledgments -- References -- Author's Address -- Chapter 3 Mapping Sequence to Rice FPC -- 3.1 Introduction -- 3.2 Overview of FPC -- 3.3 Mapping Sequence to FPC contigs -- FSD (FPC Simulated Digest) -- BSS (BLAST Some Sequence) -- Merging contigs -- Anchoring contigs -- WebFPC -- 3.4 Discussion -- Acknowledgments -- References -- Authors' Addresses -- Chapter 4 Graph Theoretic Sequence Clustering Algorithms and Their Applications to Genome Comparison -- 4.1 Introduction -- 4.1.1 Database search as a genome annotation tool -- 4.1.2 Clustering algorithms as a genome annotation tool -- 4.2 Preliminaries -- 4.3 Sequence Clustering Algorithms Based on Graph Theory -- 4.3.1 Matsuda, Ishihara, and Hashimoto algorithm -- 4.3.2 Matsuda algorithm -- 4.3.3 COG: cluster of orthologous groups -- 4.3.4 GeneRAGE -- 4.4 A New Graph Theoretic Sequence Clustering Algorithm -- 4.4.1 The basic algorithm -- 4.4.2 Result from application of the basic algorithm -- 4.5 BAG: The Extended Clustering Algorithm -- 4.5.1 Issues with the basic algorithm -- 4.5.2 Setting the cutoff threshold -- 4.5.3 The overview of the extended algorithm -- 4.5.4 AP-TEST -- 4.5.5 RANGE-TEST -- 4.5.6 HYPERGRAPH-MERGE -- 4.5.7 The Algorithm -- 4.6 Implementation -- 4.7 Application to Genome Comparison -- 4.7.1 Splitting families -- 4.7.2 Merging families -- 4.8 Conclusion -- Acknowledgments -- References -- Author's Address -- Chapter 5 The Protein Information Resource for Functional Genomics and Proteomics -- 5.1 Introduction -- 5.2 PIR-International Protein Sequence Database -- Superfamily Classification -- Evidence Attribution and Bibliography Submission -- 5.3 PIR Non-Redundant Refence Protein Database -- 5.4 Integrated Protein Classification Database -- 5.5 PIR System Distribution -- PIR Web Access -- PIR FTP Transfer -- 5.6 Conclusion -- Acknowledgments -- References -- Author's Address -- Chapter 6 High-Grade Ore for Data Mining in 3D Structures -- 6.1 Introduction -- 6.2 Traditional Quality Measures -- 6.3 All-Atom Contacts for Assessing Structural Accuracy -- 6.4.</subfield></datafield><datafield tag="520" ind1=" " ind2=" "><subfield code="a">This study contains articles written by experts on a wide range of topics that are associated with the analysis and management of biological information at the molecular level. It contains chapters on RNA and protein structure analysis, DNA computing, sequence mapping, genome comparison, gene expression data mining, metabolic network modelling, and phyloinformatics. The important work of some representative researchers in bioinformatics is brought together. The topic is treated in depth and is related to, where applicable, other emerging technologies such as data mining and visualization. The goal of the work is to introduce readers to the principle techniques of bioinformatics in the hope that they will build on them to make new discoveries of their own.</subfield></datafield><datafield tag="588" ind1="0" ind2=" "><subfield code="a">Print version record.</subfield></datafield><datafield tag="504" ind1=" " ind2=" "><subfield code="a">Includes bibliographical references and index.</subfield></datafield><datafield tag="546" ind1=" " ind2=" "><subfield code="a">English.</subfield></datafield><datafield tag="650" ind1=" " ind2="0"><subfield code="a">Computational biology.</subfield><subfield code="0">http://id.loc.gov/authorities/subjects/sh2003008355</subfield></datafield><datafield tag="650" ind1=" " ind2="0"><subfield code="a">Genetics</subfield><subfield code="x">Mathematical models.</subfield><subfield code="0">http://id.loc.gov/authorities/subjects/sh85053879</subfield></datafield><datafield tag="650" ind1=" " ind2="0"><subfield code="a">Genomics.</subfield><subfield code="0">http://id.loc.gov/authorities/subjects/sh2002000809</subfield></datafield><datafield tag="650" ind1=" " ind2="2"><subfield code="a">Computational Biology</subfield><subfield code="x">methods</subfield></datafield><datafield tag="650" ind1=" " ind2="2"><subfield code="a">Genomics</subfield><subfield code="x">methods</subfield></datafield><datafield tag="650" ind1=" " ind2="2"><subfield code="a">Proteomics</subfield><subfield code="x">methods</subfield></datafield><datafield tag="650" ind1=" " ind2="2"><subfield code="a">Computational Biology</subfield><subfield code="0">https://id.nlm.nih.gov/mesh/D019295</subfield></datafield><datafield tag="650" ind1=" " ind2="2"><subfield code="a">Genomics</subfield><subfield code="0">https://id.nlm.nih.gov/mesh/D023281</subfield></datafield><datafield tag="650" ind1=" " ind2="6"><subfield code="a">Bio-informatique.</subfield></datafield><datafield tag="650" ind1=" " ind2="6"><subfield code="a">Génomique.</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">NATURE</subfield><subfield code="x">Reference.</subfield><subfield code="2">bisacsh</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">SCIENCE</subfield><subfield code="x">Life Sciences</subfield><subfield code="x">General.</subfield><subfield code="2">bisacsh</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">SCIENCE</subfield><subfield code="x">Life Sciences</subfield><subfield code="x">Biology.</subfield><subfield code="2">bisacsh</subfield></datafield><datafield tag="650" ind1="0" ind2="7"><subfield code="a">Genetics</subfield><subfield code="x">Mathematical models.</subfield><subfield code="2">cct</subfield></datafield><datafield tag="650" ind1="0" ind2="7"><subfield code="a">Genomics.</subfield><subfield code="2">cct</subfield></datafield><datafield tag="650" ind1="0" ind2="7"><subfield code="a">Computational Biology</subfield><subfield code="x">methods.</subfield><subfield code="2">cct</subfield></datafield><datafield tag="650" ind1="0" ind2="7"><subfield code="a">Genomics</subfield><subfield code="x">methods.</subfield><subfield code="2">cct</subfield></datafield><datafield tag="650" ind1="0" ind2="7"><subfield code="a">Proteomics</subfield><subfield code="x">methods.</subfield><subfield code="2">cct</subfield></datafield><datafield tag="650" ind1="0" ind2="7"><subfield code="a">Computational Biology.</subfield><subfield code="2">cct</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">Computational biology</subfield><subfield code="2">fast</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">Genetics</subfield><subfield code="x">Mathematical models</subfield><subfield code="2">fast</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">Genomics</subfield><subfield code="2">fast</subfield></datafield><datafield tag="655" ind1=" " ind2="0"><subfield code="a">Electronic books.</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Wang, Jason T. L.</subfield><subfield code="1">https://id.oclc.org/worldcat/entity/E39PCjCbcWVjvYGhpPCMgJX7h3</subfield><subfield code="0">http://id.loc.gov/authorities/names/n98038837</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Wu, Cathy H.</subfield><subfield code="1">https://id.oclc.org/worldcat/entity/E39PCjMvmWkqCFh7FGk38RRBj3</subfield><subfield code="0">http://id.loc.gov/authorities/names/n2003008664</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Wang, Paul P.</subfield><subfield code="1">https://id.oclc.org/worldcat/entity/E39PCjt4ggcGrHbty8jTBrX68C</subfield><subfield code="0">http://id.loc.gov/authorities/names/n80091033</subfield></datafield><datafield tag="758" ind1=" " ind2=" "><subfield code="i">has work:</subfield><subfield code="a">Computational biology and genome informatics (Text)</subfield><subfield code="1">https://id.oclc.org/worldcat/entity/E39PCGhpvVT7v6tRdPr7m6p96q</subfield><subfield code="4">https://id.oclc.org/worldcat/ontology/hasWork</subfield></datafield><datafield tag="776" ind1="0" ind2="8"><subfield code="i">Print version:</subfield><subfield code="t">Computational biology and genome informatics.</subfield><subfield code="d">New Jersey : World Scientific, ©2003</subfield><subfield code="z">9812382577</subfield><subfield code="w">(DLC) 2003544795</subfield><subfield code="w">(OCoLC)52799518</subfield></datafield><datafield tag="966" ind1="4" ind2="0"><subfield code="l">DE-862</subfield><subfield code="p">ZDB-4-EBA</subfield><subfield code="q">FWS_PDA_EBA</subfield><subfield code="u">https://search.ebscohost.com/login.aspx?direct=true&scope=site&db=nlebk&AN=134081</subfield><subfield code="3">Volltext</subfield></datafield><datafield tag="966" ind1="4" ind2="0"><subfield code="l">DE-863</subfield><subfield code="p">ZDB-4-EBA</subfield><subfield code="q">FWS_PDA_EBA</subfield><subfield code="u">https://search.ebscohost.com/login.aspx?direct=true&scope=site&db=nlebk&AN=134081</subfield><subfield code="3">Volltext</subfield></datafield><datafield tag="936" ind1=" " ind2=" "><subfield code="a">BATCHLOAD</subfield></datafield><datafield tag="938" ind1=" " ind2=" "><subfield code="a">cloudLibrary</subfield><subfield code="b">CLDL</subfield><subfield code="n">9789812564498</subfield></datafield><datafield tag="938" ind1=" " ind2=" "><subfield code="a">Askews and Holts Library Services</subfield><subfield code="b">ASKH</subfield><subfield code="n">AH21190635</subfield></datafield><datafield tag="938" ind1=" " ind2=" "><subfield code="a">EBL - Ebook Library</subfield><subfield code="b">EBLB</subfield><subfield code="n">EBL234360</subfield></datafield><datafield tag="938" ind1=" " ind2=" "><subfield code="a">ebrary</subfield><subfield code="b">EBRY</subfield><subfield code="n">ebr10083762</subfield></datafield><datafield tag="938" ind1=" " ind2=" "><subfield code="a">EBSCOhost</subfield><subfield code="b">EBSC</subfield><subfield code="n">134081</subfield></datafield><datafield tag="938" ind1=" " ind2=" "><subfield code="a">ProQuest MyiLibrary Digital eBook Collection</subfield><subfield code="b">IDEB</subfield><subfield code="n">134773</subfield></datafield><datafield tag="938" ind1=" " ind2=" "><subfield code="a">YBP Library Services</subfield><subfield code="b">YANK</subfield><subfield code="n">2407670</subfield></datafield><datafield tag="938" ind1=" " ind2=" "><subfield code="a">Internet Archive</subfield><subfield code="b">INAR</subfield><subfield code="n">isbn_9789812382573</subfield></datafield><datafield tag="994" ind1=" " ind2=" "><subfield code="a">92</subfield><subfield code="b">GEBAY</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">ZDB-4-EBA</subfield></datafield><datafield tag="049" ind1=" " ind2=" "><subfield code="a">DE-862</subfield></datafield><datafield tag="049" ind1=" " ind2=" "><subfield code="a">DE-863</subfield></datafield></record></collection> |
genre | Electronic books. |
genre_facet | Electronic books. |
id | ZDB-4-EBA-ocm70738403 |
illustrated | Illustrated |
indexdate | 2025-04-11T08:35:44Z |
institution | BVB |
isbn | 9812382577 9789812382573 9812564497 9789812564498 1281347736 9781281347732 9786611347734 6611347739 |
language | English |
oclc_num | 70738403 |
open_access_boolean | |
owner | MAIN DE-862 DE-BY-FWS DE-863 DE-BY-FWS |
owner_facet | MAIN DE-862 DE-BY-FWS DE-863 DE-BY-FWS |
physical | 1 online resource (viii, 257 pages) : illustrations (some color) |
psigel | ZDB-4-EBA FWS_PDA_EBA ZDB-4-EBA |
publishDate | 2003 |
publishDateSearch | 2003 |
publishDateSort | 2003 |
publisher | World Scientific, |
record_format | marc |
spelling | Computational biology and genome informatics / editors, Jason T.L. Wang, Cathy H. Wu, Paul P. Wang. New Jersey : World Scientific, ©2003. 1 online resource (viii, 257 pages) : illustrations (some color) text txt rdacontent computer c rdamedia online resource cr rdacarrier data file Cover -- Preface -- Contents -- Chapter 1 Exploring RNA Intermediate Conformations with the Massively Parallel Genetic Algorithm -- 1.1 Introduction -- 1.2 Algorithmic Implementation -- Population -- Basic Algorithm -- Additional Features -- 1.3 Data Generation and Analysis -- Exemplary Biological Systems -- Population Dynamics and Interactive Visualization -- Stem Trace and Structurelab -- Single Run Analysis -- Multiple Run Analysis -- Multiple Population Size Analysis -- 1.4 Biological Application -- PSTVd -- hok/sok -- 1.5 Conclusions -- Acknowledgment -- References -- Authors' Addresses -- Chapter 2 Introduction to Self-Assembling DNA Nanostructures for Computation and Nanofabrication -- 2.1 Introduction -- 2.2 Background -- Chemistry and Biology of DNA -- DNA as a Structural Material -- Design of Base Sequences for DNA Nanoconstruction -- 2.3 Experiments and Applications -- DNA-based Computation -- Algorithmic Self-Assembly -- Patterned DNA Nanostructures -- Patterned Immobilization of Other Materials on DNA Arrays -- 2.4 Summary and Future Directions -- Possible Future Applications -- Acknowledgments -- References -- Author's Address -- Chapter 3 Mapping Sequence to Rice FPC -- 3.1 Introduction -- 3.2 Overview of FPC -- 3.3 Mapping Sequence to FPC contigs -- FSD (FPC Simulated Digest) -- BSS (BLAST Some Sequence) -- Merging contigs -- Anchoring contigs -- WebFPC -- 3.4 Discussion -- Acknowledgments -- References -- Authors' Addresses -- Chapter 4 Graph Theoretic Sequence Clustering Algorithms and Their Applications to Genome Comparison -- 4.1 Introduction -- 4.1.1 Database search as a genome annotation tool -- 4.1.2 Clustering algorithms as a genome annotation tool -- 4.2 Preliminaries -- 4.3 Sequence Clustering Algorithms Based on Graph Theory -- 4.3.1 Matsuda, Ishihara, and Hashimoto algorithm -- 4.3.2 Matsuda algorithm -- 4.3.3 COG: cluster of orthologous groups -- 4.3.4 GeneRAGE -- 4.4 A New Graph Theoretic Sequence Clustering Algorithm -- 4.4.1 The basic algorithm -- 4.4.2 Result from application of the basic algorithm -- 4.5 BAG: The Extended Clustering Algorithm -- 4.5.1 Issues with the basic algorithm -- 4.5.2 Setting the cutoff threshold -- 4.5.3 The overview of the extended algorithm -- 4.5.4 AP-TEST -- 4.5.5 RANGE-TEST -- 4.5.6 HYPERGRAPH-MERGE -- 4.5.7 The Algorithm -- 4.6 Implementation -- 4.7 Application to Genome Comparison -- 4.7.1 Splitting families -- 4.7.2 Merging families -- 4.8 Conclusion -- Acknowledgments -- References -- Author's Address -- Chapter 5 The Protein Information Resource for Functional Genomics and Proteomics -- 5.1 Introduction -- 5.2 PIR-International Protein Sequence Database -- Superfamily Classification -- Evidence Attribution and Bibliography Submission -- 5.3 PIR Non-Redundant Refence Protein Database -- 5.4 Integrated Protein Classification Database -- 5.5 PIR System Distribution -- PIR Web Access -- PIR FTP Transfer -- 5.6 Conclusion -- Acknowledgments -- References -- Author's Address -- Chapter 6 High-Grade Ore for Data Mining in 3D Structures -- 6.1 Introduction -- 6.2 Traditional Quality Measures -- 6.3 All-Atom Contacts for Assessing Structural Accuracy -- 6.4. This study contains articles written by experts on a wide range of topics that are associated with the analysis and management of biological information at the molecular level. It contains chapters on RNA and protein structure analysis, DNA computing, sequence mapping, genome comparison, gene expression data mining, metabolic network modelling, and phyloinformatics. The important work of some representative researchers in bioinformatics is brought together. The topic is treated in depth and is related to, where applicable, other emerging technologies such as data mining and visualization. The goal of the work is to introduce readers to the principle techniques of bioinformatics in the hope that they will build on them to make new discoveries of their own. Print version record. Includes bibliographical references and index. English. Computational biology. http://id.loc.gov/authorities/subjects/sh2003008355 Genetics Mathematical models. http://id.loc.gov/authorities/subjects/sh85053879 Genomics. http://id.loc.gov/authorities/subjects/sh2002000809 Computational Biology methods Genomics methods Proteomics methods Computational Biology https://id.nlm.nih.gov/mesh/D019295 Genomics https://id.nlm.nih.gov/mesh/D023281 Bio-informatique. Génomique. NATURE Reference. bisacsh SCIENCE Life Sciences General. bisacsh SCIENCE Life Sciences Biology. bisacsh Genetics Mathematical models. cct Genomics. cct Computational Biology methods. cct Genomics methods. cct Proteomics methods. cct Computational Biology. cct Computational biology fast Genetics Mathematical models fast Genomics fast Electronic books. Wang, Jason T. L. https://id.oclc.org/worldcat/entity/E39PCjCbcWVjvYGhpPCMgJX7h3 http://id.loc.gov/authorities/names/n98038837 Wu, Cathy H. https://id.oclc.org/worldcat/entity/E39PCjMvmWkqCFh7FGk38RRBj3 http://id.loc.gov/authorities/names/n2003008664 Wang, Paul P. https://id.oclc.org/worldcat/entity/E39PCjt4ggcGrHbty8jTBrX68C http://id.loc.gov/authorities/names/n80091033 has work: Computational biology and genome informatics (Text) https://id.oclc.org/worldcat/entity/E39PCGhpvVT7v6tRdPr7m6p96q https://id.oclc.org/worldcat/ontology/hasWork Print version: Computational biology and genome informatics. New Jersey : World Scientific, ©2003 9812382577 (DLC) 2003544795 (OCoLC)52799518 |
spellingShingle | Computational biology and genome informatics / Cover -- Preface -- Contents -- Chapter 1 Exploring RNA Intermediate Conformations with the Massively Parallel Genetic Algorithm -- 1.1 Introduction -- 1.2 Algorithmic Implementation -- Population -- Basic Algorithm -- Additional Features -- 1.3 Data Generation and Analysis -- Exemplary Biological Systems -- Population Dynamics and Interactive Visualization -- Stem Trace and Structurelab -- Single Run Analysis -- Multiple Run Analysis -- Multiple Population Size Analysis -- 1.4 Biological Application -- PSTVd -- hok/sok -- 1.5 Conclusions -- Acknowledgment -- References -- Authors' Addresses -- Chapter 2 Introduction to Self-Assembling DNA Nanostructures for Computation and Nanofabrication -- 2.1 Introduction -- 2.2 Background -- Chemistry and Biology of DNA -- DNA as a Structural Material -- Design of Base Sequences for DNA Nanoconstruction -- 2.3 Experiments and Applications -- DNA-based Computation -- Algorithmic Self-Assembly -- Patterned DNA Nanostructures -- Patterned Immobilization of Other Materials on DNA Arrays -- 2.4 Summary and Future Directions -- Possible Future Applications -- Acknowledgments -- References -- Author's Address -- Chapter 3 Mapping Sequence to Rice FPC -- 3.1 Introduction -- 3.2 Overview of FPC -- 3.3 Mapping Sequence to FPC contigs -- FSD (FPC Simulated Digest) -- BSS (BLAST Some Sequence) -- Merging contigs -- Anchoring contigs -- WebFPC -- 3.4 Discussion -- Acknowledgments -- References -- Authors' Addresses -- Chapter 4 Graph Theoretic Sequence Clustering Algorithms and Their Applications to Genome Comparison -- 4.1 Introduction -- 4.1.1 Database search as a genome annotation tool -- 4.1.2 Clustering algorithms as a genome annotation tool -- 4.2 Preliminaries -- 4.3 Sequence Clustering Algorithms Based on Graph Theory -- 4.3.1 Matsuda, Ishihara, and Hashimoto algorithm -- 4.3.2 Matsuda algorithm -- 4.3.3 COG: cluster of orthologous groups -- 4.3.4 GeneRAGE -- 4.4 A New Graph Theoretic Sequence Clustering Algorithm -- 4.4.1 The basic algorithm -- 4.4.2 Result from application of the basic algorithm -- 4.5 BAG: The Extended Clustering Algorithm -- 4.5.1 Issues with the basic algorithm -- 4.5.2 Setting the cutoff threshold -- 4.5.3 The overview of the extended algorithm -- 4.5.4 AP-TEST -- 4.5.5 RANGE-TEST -- 4.5.6 HYPERGRAPH-MERGE -- 4.5.7 The Algorithm -- 4.6 Implementation -- 4.7 Application to Genome Comparison -- 4.7.1 Splitting families -- 4.7.2 Merging families -- 4.8 Conclusion -- Acknowledgments -- References -- Author's Address -- Chapter 5 The Protein Information Resource for Functional Genomics and Proteomics -- 5.1 Introduction -- 5.2 PIR-International Protein Sequence Database -- Superfamily Classification -- Evidence Attribution and Bibliography Submission -- 5.3 PIR Non-Redundant Refence Protein Database -- 5.4 Integrated Protein Classification Database -- 5.5 PIR System Distribution -- PIR Web Access -- PIR FTP Transfer -- 5.6 Conclusion -- Acknowledgments -- References -- Author's Address -- Chapter 6 High-Grade Ore for Data Mining in 3D Structures -- 6.1 Introduction -- 6.2 Traditional Quality Measures -- 6.3 All-Atom Contacts for Assessing Structural Accuracy -- 6.4. Computational biology. http://id.loc.gov/authorities/subjects/sh2003008355 Genetics Mathematical models. http://id.loc.gov/authorities/subjects/sh85053879 Genomics. http://id.loc.gov/authorities/subjects/sh2002000809 Computational Biology methods Genomics methods Proteomics methods Computational Biology https://id.nlm.nih.gov/mesh/D019295 Genomics https://id.nlm.nih.gov/mesh/D023281 Bio-informatique. Génomique. NATURE Reference. bisacsh SCIENCE Life Sciences General. bisacsh SCIENCE Life Sciences Biology. bisacsh Genetics Mathematical models. cct Genomics. cct Computational Biology methods. cct Genomics methods. cct Proteomics methods. cct Computational Biology. cct Computational biology fast Genetics Mathematical models fast Genomics fast |
subject_GND | http://id.loc.gov/authorities/subjects/sh2003008355 http://id.loc.gov/authorities/subjects/sh85053879 http://id.loc.gov/authorities/subjects/sh2002000809 https://id.nlm.nih.gov/mesh/D019295 https://id.nlm.nih.gov/mesh/D023281 |
title | Computational biology and genome informatics / |
title_auth | Computational biology and genome informatics / |
title_exact_search | Computational biology and genome informatics / |
title_full | Computational biology and genome informatics / editors, Jason T.L. Wang, Cathy H. Wu, Paul P. Wang. |
title_fullStr | Computational biology and genome informatics / editors, Jason T.L. Wang, Cathy H. Wu, Paul P. Wang. |
title_full_unstemmed | Computational biology and genome informatics / editors, Jason T.L. Wang, Cathy H. Wu, Paul P. Wang. |
title_short | Computational biology and genome informatics / |
title_sort | computational biology and genome informatics |
topic | Computational biology. http://id.loc.gov/authorities/subjects/sh2003008355 Genetics Mathematical models. http://id.loc.gov/authorities/subjects/sh85053879 Genomics. http://id.loc.gov/authorities/subjects/sh2002000809 Computational Biology methods Genomics methods Proteomics methods Computational Biology https://id.nlm.nih.gov/mesh/D019295 Genomics https://id.nlm.nih.gov/mesh/D023281 Bio-informatique. Génomique. NATURE Reference. bisacsh SCIENCE Life Sciences General. bisacsh SCIENCE Life Sciences Biology. bisacsh Genetics Mathematical models. cct Genomics. cct Computational Biology methods. cct Genomics methods. cct Proteomics methods. cct Computational Biology. cct Computational biology fast Genetics Mathematical models fast Genomics fast |
topic_facet | Computational biology. Genetics Mathematical models. Genomics. Computational Biology methods Genomics methods Proteomics methods Computational Biology Genomics Bio-informatique. Génomique. NATURE Reference. SCIENCE Life Sciences General. SCIENCE Life Sciences Biology. Computational Biology methods. Genomics methods. Proteomics methods. Computational Biology. Computational biology Genetics Mathematical models Electronic books. |
work_keys_str_mv | AT wangjasontl computationalbiologyandgenomeinformatics AT wucathyh computationalbiologyandgenomeinformatics AT wangpaulp computationalbiologyandgenomeinformatics |