Fungal genomics: methods and protocols
This volume details protocols covering nearly all aspects of fungal genomics. New and updated chapters guide the reader through experimental genomics, biotechnologies, and the analysis and processing of data. Written in the highly successful Methods in Molecular Biology series format, chapters inclu...
Gespeichert in:
| Weitere Verfasser: | , , |
|---|---|
| Format: | Elektronisch E-Book |
| Sprache: | English |
| Veröffentlicht: |
New York, NY
Springer New York
2018
|
| Ausgabe: | 2nd ed. 2018 |
| Schriftenreihe: | Methods in Molecular Biology
1775 |
| Schlagworte: | |
| Online-Zugang: | UBR01 TUM01 Volltext |
| Zusammenfassung: | This volume details protocols covering nearly all aspects of fungal genomics. New and updated chapters guide the reader through experimental genomics, biotechnologies, and the analysis and processing of data. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Fungal Genomics : Methods and Protocols, Second Edition aims to ensure successful results in the further study of this vital field |
| Beschreibung: | Introduction to the Book: Overview of Fungal Genomics -- Fungal Genomic DNA Extraction Methods for Rapid Genotyping and Genome Sequencing -- Purification of Fungal High Molecular Weight Genomic DNA from Environmental Samples -- Genome Sequencing -- Methods for Genomic Characterization and Maintenance of Anaerobic Fungi -- Efficient Extraction Method for High Quality Fungal RNA from Complex Lignocellulosic Substrates -- Isolation of high quality RNA for Metatranscriptome Analysis of Lignocellulose Digestion in the Rumen -- Fungal Transcriptomics -- Mass Spectrometrybased Proteomics -- Mass Spectrometry Based Metabolomics -- Genome Editing - CRISPR/cas9 -- Evolutionary Adaptation to Generate Mutants -- Genome Assembly -- Fungal Epigenomics: Detection and Analysis -- Fungal Genome Annotation -- Manual Gene Curation and Functional Annotation -- Evaluating Programs for Predicting Genes and Transcripts with RNA-Seq Support in Fungal Genomes -- Genomic Sequence Variation Analysis by Resequencing -- ChIP-seq Analysis in Neurospora crass -- Fungal Phylogenomics -- Phylogenetic Analysis of Protein Family -- Parasexual Crossings for Bulk Segregant Analysis in Aspergillus Niger To Facilitate Mutant Identification Via Whole Genome Sequencing. |
| Beschreibung: | 1 Online-Ressource (XI, 291 Seiten) Illustrationen |
| ISBN: | 9781493978045 |
| DOI: | 10.1007/978-1-4939-7804-5 |
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| indexdate | 2024-07-10T09:17:35Z |
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| isbn | 9781493978045 |
| language | English |
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| spelling | Fungal genomics methods and protocols edited by Ronald P. de Vries, Adrian Tsang, Igor V. Grigoriev 2nd ed. 2018 New York, NY Springer New York 2018 1 Online-Ressource (XI, 291 Seiten) Illustrationen txt rdacontent c rdamedia cr rdacarrier Methods in Molecular Biology 1775 Introduction to the Book: Overview of Fungal Genomics -- Fungal Genomic DNA Extraction Methods for Rapid Genotyping and Genome Sequencing -- Purification of Fungal High Molecular Weight Genomic DNA from Environmental Samples -- Genome Sequencing -- Methods for Genomic Characterization and Maintenance of Anaerobic Fungi -- Efficient Extraction Method for High Quality Fungal RNA from Complex Lignocellulosic Substrates -- Isolation of high quality RNA for Metatranscriptome Analysis of Lignocellulose Digestion in the Rumen -- Fungal Transcriptomics -- Mass Spectrometrybased Proteomics -- Mass Spectrometry Based Metabolomics -- Genome Editing - CRISPR/cas9 -- Evolutionary Adaptation to Generate Mutants -- Genome Assembly -- Fungal Epigenomics: Detection and Analysis -- Fungal Genome Annotation -- Manual Gene Curation and Functional Annotation -- Evaluating Programs for Predicting Genes and Transcripts with RNA-Seq Support in Fungal Genomes -- Genomic Sequence Variation Analysis by Resequencing -- ChIP-seq Analysis in Neurospora crass -- Fungal Phylogenomics -- Phylogenetic Analysis of Protein Family -- Parasexual Crossings for Bulk Segregant Analysis in Aspergillus Niger To Facilitate Mutant Identification Via Whole Genome Sequencing. This volume details protocols covering nearly all aspects of fungal genomics. New and updated chapters guide the reader through experimental genomics, biotechnologies, and the analysis and processing of data. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Fungal Genomics : Methods and Protocols, Second Edition aims to ensure successful results in the further study of this vital field Microbiology Vries, Ronald P. de 1967- (DE-588)173300227 edt Tsang, Adrian (DE-588)1162540982 edt Grigoriev, Igor V. (DE-588)1162541288 edt Erscheint auch als Druck-Ausgabe 9781493978038 Erscheint auch als Druck-Ausgabe 9781493978052 Erscheint auch als Druck-Ausgabe 9781493992904 https://doi.org/10.1007/978-1-4939-7804-5 Verlag URL des Erstveröffentlichers Volltext |
| spellingShingle | Fungal genomics methods and protocols Microbiology |
| title | Fungal genomics methods and protocols |
| title_auth | Fungal genomics methods and protocols |
| title_exact_search | Fungal genomics methods and protocols |
| title_exact_search_txtP | Fungal genomics methods and protocols |
| title_full | Fungal genomics methods and protocols edited by Ronald P. de Vries, Adrian Tsang, Igor V. Grigoriev |
| title_fullStr | Fungal genomics methods and protocols edited by Ronald P. de Vries, Adrian Tsang, Igor V. Grigoriev |
| title_full_unstemmed | Fungal genomics methods and protocols edited by Ronald P. de Vries, Adrian Tsang, Igor V. Grigoriev |
| title_short | Fungal genomics |
| title_sort | fungal genomics methods and protocols |
| title_sub | methods and protocols |
| topic | Microbiology |
| topic_facet | Microbiology |
| url | https://doi.org/10.1007/978-1-4939-7804-5 |
| work_keys_str_mv | AT vriesronaldpde fungalgenomicsmethodsandprotocols AT tsangadrian fungalgenomicsmethodsandprotocols AT grigorievigorv fungalgenomicsmethodsandprotocols |