Multiple Sequenzalignments: Welches Programm passt zu meinen Daten?
Gespeichert in:
| 1. Verfasser: | |
|---|---|
| Format: | Buch |
| Sprache: | German |
| Veröffentlicht: |
Berlin
Springer Berlin
2019
Springer Spektrum 2019 |
| Ausgabe: | 1. Auflage 2019 |
| Schlagworte: | |
| Online-Zugang: | Inhaltstext http://www.springer.com/ Inhaltsverzeichnis |
| Beschreibung: | IX, 102 Seiten 12 Illustrationen, 11 Illustrationen |
| ISBN: | 9783662588109 3662588102 |
Internformat
MARC
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| 245 | 1 | 0 | |a Multiple Sequenzalignments |b Welches Programm passt zu meinen Daten? |c Theodor Sperlea |
| 250 | |a 1. Auflage 2019 | ||
| 263 | |a 201907 | ||
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| 264 | 1 | |b Springer Spektrum |c 2019 | |
| 300 | |a IX, 102 Seiten |b 12 Illustrationen, 11 Illustrationen | ||
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| 337 | |b n |2 rdamedia | ||
| 338 | |b nc |2 rdacarrier | ||
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| 650 | 0 | 7 | |a Programm |0 (DE-588)4047394-6 |2 gnd |9 rswk-swf |
| 653 | |a PSD | ||
| 653 | |a Algorithmen | ||
| 653 | |a BLAST | ||
| 653 | |a Bioinformatik | ||
| 653 | |a CLUSTAL | ||
| 653 | |a CLUSTALW | ||
| 653 | |a MAFFT | ||
| 653 | |a MUSCLE | ||
| 653 | |a Sequencealignments | ||
| 653 | |a Suchalgorithmen | ||
| 653 | |a multiple alignments | ||
| 653 | |a multiple sequence alignments | ||
| 653 | |a pairwise alignment | ||
| 653 | |a PST | ||
| 653 | |a PBW | ||
| 653 | |a PSD | ||
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| 689 | 1 | 0 | |a Alignment |g Biochemie |0 (DE-588)4463360-9 |D s |
| 689 | 1 | 1 | |a Programm |0 (DE-588)4047394-6 |D s |
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Datensatz im Suchindex
| _version_ | 1804179484795994112 |
|---|---|
| adam_text | INHALTSVERZEICHNIS
TEIL
I
HINTERGRUENDE
1
MULTIPLE
SEQUENZALIGNMENTS:
EINE
EINFUEHRUNG
........................................
3
1.1
EINLEITUNG
.............................................................................................
3
1.2
ANWENDUNGSBEREICHE
VON
MS
AS
................................................
4
1.3
DARSTELLUNGSFORMATE
VON
MS
AS
.........................................................
6
2
WIE
FUNKTIONIEREN
MSA-PROGRAMME?
.......................................................
17
2.1
EINLEITUNG
.............................................................................................
17
2.2
PAARWEISE
SEQUENZALIGNMENTS
.............................................................
17
2.2.1
EINE
NAIVE
METHODE
.................................................................
17
2.2.2
DYNAMIC
PROGRAMMING
..........................................................
18
2.2.3
LUECKEN
UND
DIE
AEHNLICHKEITSMATRIX
......................................
21
2.2.4
GLOBALE
UND
LOKALE
ALIGNMENTS
..............................................
23
2.3
MULTIPLE
SEQUENZALIGNMENTS
...............................................................
25
2.3.1
DAS
ZENTRALE
PROBLEM
..............................................................
25
2.3.2
LOESUNG
1:
DIE
PROGRESSIVE
METHODE
.......................................
26
2.3.3
LOESUNG
2:
DIE
ITERATIVE
METHODE
............................................
27
2.3.4
LOESUNG
3:
DIE
KONSISTENZBASIERTE
METHODE
..........................
27
2.3.5
LOESUNG
4:
DIE
PROBABILISTISCHE
METHODE
..............................
28
2.3.6
LOESUNG
5:
DIE
META-
ODER
ENSEMBLE-METHODE
....................
29
2.3.7
METHODEN
DER
ZUKUNFT
.............................................................
30
2.3.8
SONDERFAELLE
BENOETIGEN
BESONDERE
METHODEN
..........................
31
2.4
WEITERFUEHRENDE
THEMEN
.......................................................................
33
2.4.1
STRUKTURBASIERTE
MSAS
.............................................................
33
2.4.2
BLAST
UND
CO
.........................................................................
34
2.4.3
ALIGNMENT-FREIE
METHODEN
.....................................................
35
2.4.4
GENOM-
UND
CHROMOSOMALIGNMENTS
....................................
35
3
UEBERSICHT
AKTUELLER
MSA-PROGRAMME
.......................................................
37
3.1
EINLEITUNG
.............................................................................................
37
3.2
AUFLISTUNG
GEBRAEUCHLICHER
MSA-PROGRAMME
....................................
38
XI
XII
INHALTSVERZEICHNIS
TEIL
II
WELCHER
MSA-ALGORITHMUS
IST
PASSEND
FIIR
MICH?
4
DETAILS
ZUR
ANALYSE
DER
PROGRAMME
............................................................
57
4.1
BENCHMARKING
.......................................................................................
57
4.2
GENUTZTE
BENCHMARK
DATENSAETZE
.......................................................
60
4.2.1
BALIBASE
...............................................................................
60
4.2.2
BRALIBASE
.............................................................................
63
4.2.3
BENCH
.......................................................................................
64
4.2.4
KUENSTLICHE
BENCHMARKS:
ROSE,
IRMBASE
UND
DIRMBASE
.........................................................................
67
4.2.5
HOMSTRAD
...........................................................................
67
4.3
SCORES
...................................................................................................
68
4.3.1
SUM-OF-PAIRS
.............................................................................
69
4.3.2
DER
COLUMN
SCORE
...................................................................
69
4.3.3
MODELER
.....................................................................................
70
4.3.4
CLINE
*
S-SHIFT-SCORE
...................................................................
70
4.3.5
TRANSIT!
VE-CONSISTENCY-SCORE
.................................................
71
5
ENTSCHEIDUNGSHILFE
...........................................................................................
73
5.1
EINLEITUNG
.............................................................................................
73
5.2
DURCHFUEHRUNG
.......................................................................................
74
5.3
ERGEBNISSE
.............................................................................................
76
5.3.1
RNA
.........................................................................................
76
5.3.2
DNA
.........................................................................................
79
5.3.3
PROTEINE
.....................................................................................
80
GLOSSAR
.......................................................................................................................
89
LITERATUR
..................................................................................................................
95
STICHWORTVERZEICHNIS
.............................................................................................
101
|
| any_adam_object | 1 |
| author | Sperlea, Theodor |
| author_GND | (DE-588)1189602482 |
| author_facet | Sperlea, Theodor |
| author_role | aut |
| author_sort | Sperlea, Theodor |
| author_variant | t s ts |
| building | Verbundindex |
| bvnumber | BV045528369 |
| classification_rvk | WC 7700 |
| ctrlnum | (OCoLC)1083229785 (DE-599)DNB1175656682 |
| discipline | Biologie |
| edition | 1. Auflage 2019 |
| format | Book |
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| id | DE-604.BV045528369 |
| illustrated | Illustrated |
| indexdate | 2024-07-10T08:20:36Z |
| institution | BVB |
| institution_GND | (DE-588)1065168780 |
| isbn | 9783662588109 3662588102 |
| language | German |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-030912534 |
| oclc_num | 1083229785 |
| open_access_boolean | |
| owner | DE-20 DE-11 |
| owner_facet | DE-20 DE-11 |
| physical | IX, 102 Seiten 12 Illustrationen, 11 Illustrationen |
| publishDate | 2019 |
| publishDateSearch | 2019 |
| publishDateSort | 2019 |
| publisher | Springer Berlin Springer Spektrum |
| record_format | marc |
| spelling | Sperlea, Theodor (DE-588)1189602482 aut Multiple Sequenzalignments Welches Programm passt zu meinen Daten? Theodor Sperlea 1. Auflage 2019 201907 Berlin Springer Berlin 2019 Springer Spektrum 2019 IX, 102 Seiten 12 Illustrationen, 11 Illustrationen txt rdacontent n rdamedia nc rdacarrier Bioinformatik (DE-588)4611085-9 gnd rswk-swf Alignment Biochemie (DE-588)4463360-9 gnd rswk-swf Programm (DE-588)4047394-6 gnd rswk-swf PSD Algorithmen BLAST Bioinformatik CLUSTAL CLUSTALW MAFFT MUSCLE Sequencealignments Suchalgorithmen multiple alignments multiple sequence alignments pairwise alignment PST PBW Bioinformatik (DE-588)4611085-9 s Alignment Biochemie (DE-588)4463360-9 s DE-604 Programm (DE-588)4047394-6 s Springer-Verlag GmbH (DE-588)1065168780 pbl Erscheint auch als Online-Ausgabe 9783662588116 X:MVB text/html http://deposit.dnb.de/cgi-bin/dokserv?id=fb246b836dc54f3182b45b4a99c97501&prov=M&dok_var=1&dok_ext=htm Inhaltstext X:MVB http://www.springer.com/ DNB Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=030912534&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Sperlea, Theodor Multiple Sequenzalignments Welches Programm passt zu meinen Daten? Bioinformatik (DE-588)4611085-9 gnd Alignment Biochemie (DE-588)4463360-9 gnd Programm (DE-588)4047394-6 gnd |
| subject_GND | (DE-588)4611085-9 (DE-588)4463360-9 (DE-588)4047394-6 |
| title | Multiple Sequenzalignments Welches Programm passt zu meinen Daten? |
| title_auth | Multiple Sequenzalignments Welches Programm passt zu meinen Daten? |
| title_exact_search | Multiple Sequenzalignments Welches Programm passt zu meinen Daten? |
| title_full | Multiple Sequenzalignments Welches Programm passt zu meinen Daten? Theodor Sperlea |
| title_fullStr | Multiple Sequenzalignments Welches Programm passt zu meinen Daten? Theodor Sperlea |
| title_full_unstemmed | Multiple Sequenzalignments Welches Programm passt zu meinen Daten? Theodor Sperlea |
| title_short | Multiple Sequenzalignments |
| title_sort | multiple sequenzalignments welches programm passt zu meinen daten |
| title_sub | Welches Programm passt zu meinen Daten? |
| topic | Bioinformatik (DE-588)4611085-9 gnd Alignment Biochemie (DE-588)4463360-9 gnd Programm (DE-588)4047394-6 gnd |
| topic_facet | Bioinformatik Alignment Biochemie Programm |
| url | http://deposit.dnb.de/cgi-bin/dokserv?id=fb246b836dc54f3182b45b4a99c97501&prov=M&dok_var=1&dok_ext=htm http://www.springer.com/ http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=030912534&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
| work_keys_str_mv | AT sperleatheodor multiplesequenzalignmentswelchesprogrammpasstzumeinendaten AT springerverlaggmbh multiplesequenzalignmentswelchesprogrammpasstzumeinendaten |