An introduction to molecular ecology:
Gespeichert in:
| Hauptverfasser: | , , |
|---|---|
| Format: | Buch |
| Sprache: | English |
| Veröffentlicht: |
Oxford
Oxford University Press
[2017]
|
| Ausgabe: | Third edition |
| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | 2. Auflage unter dem Titel: Beebee, Trevor J.C.: An introduction to molecular ecology |
| Beschreibung: | viii, 535 Seiten Illustrationen, Diagramme |
| ISBN: | 9780198716990 |
Internformat
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Datensatz im Suchindex
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|---|---|
| adam_text | DETAILED CONTENTS
Preface ix
Acknowledgements x
1 Molecular ecology: roots and branches 1
What is molecular ecology? 1
Overview and organization of this book 4
Evolutionary framework for molecular ecology 5
Molecules, molecular markers, and molecular ecology 13
Next generation molecular ecology 17
Putting the ecology back into molecular ecology 22
Summary 24
2 Molecular biology for ecologists 26
Introduction 26
Nucleic acids and the common origin of life 27
Structure of DNA and RNA 28
Mutation as the source for all genetic variation 32
Accessing DNA sequence information 35
DNA to proteins 43
Proteins 47
Genome organization and genomics 49
Eukaryotic genome structure 51
Non-coding DNA 52
Coding and other functional genomic regions 55
Gene expression, the transcriptome, and proteome 59
Summary 62
3 Molecular tools for molecular ecologists 64
Introduction 64
Genetic manipulation in molecular ecology 66
Protein and DNA extraction from tissue samples 68
Non-PCR-based tools for studying genetic variation 71
Accessing the genome using PCR-based molecular
markers 76
PCR-based molecular markers requiring sequence
information from the study species 77
PCR-based molecular markers NOT requiring sequence
information from the study species 83
Measuring gene expression 87
Next generation sequencing and the marker revolution 89
Summary 89
4 Next generation sequencing 91
Introduction 91
First, second, and third generation sequencing 92
Next generation sequencing platforms 95
Methodological advancements in next
generation sequencing 100
Next generation sequencing applications
in molecular ecology 102
Deep sequencing 104
Targeted sequencing 106
Marker discovery and genotyping 108
Transcriptomics 111
Epigenomics 115
Next generation sequencing:
a panacea for molecular ecology? 119
Summary 122
5 Species, populations, and individuals 123
Introduction 123
The species problem 124
Hybrids and hybrid zones 130
Evolutionary significant units and
management units 134
Cryptic species, sibling species, and
sister species 136
DNA barcoding, metabarcoding, and
metagenomics 139
Environmental DNA 144
Ancient DNA and proteins 147
Dealing with individuals 153
Identification of sex 157
Bits of individuals: non-invasive sampling 160
Summary 163
6 Behavioural ecology 165
Introduction 165
From monogamy to promiscuity 166
Sexual dimorphism and male dominance 175
Female reproductive behaviour 178
Sex ratio biases in offspring 183
Cooperative behaviour 184
Cheating tactics 187
Foraging and dispersal 189
Behaviourally mediated speciation 192
Genomes, genomics, and animal behaviour 198
Epigenetics and behavioural ecology 200
Current direction and future challenges
for behavioural ecology 203
Summary 204
Detailed Contents
7 Population genetics 206
Introduction 206
Genetic diversity in natural populations 207
Effective population size 214
Population bottlenecks and expansions 218
Population structure 221
Genetics of metapopulations 227
Gene flow and migration rates 231
Identification of immigrants 236
Landscape genetics: bringing it all together 238
Molecular markers for population genetics:
an appraisal 240
Summary 242
8 Neutral and adaptive molecular variation 243
Introduction 243
Genetic variation in populations 245
Genetic load, natural selection, and the
neutral theory 247
Neutral and adaptive variation 251
Neutral markers which are not completely neutral 256
Heterozygosity and fitness 260
Molecular approaches to understanding
adaptive variation 265
Genomics and the study of adaptive variation 273
Summary 277
9 Phylogeography 278
Introduction 278
Molecular markers in phylogeography 279
Genetic variation in space 287
Genetic variation in time 304
Phylogeography of microorganisms 309
Applied phylogeography 311
Summary 320
10 Conservation genetics 322
Introduction 322
Molecular genetics in conservation biology 324
Genetic diversity as a conservation issue 326
Inbreeding and genetic load 330
Genetic restoration 336
Captive breeding for réintroduction into the wild 338
Desperate measures 339
Wildlife health and disease 344
Wildlife forensics 347
Genetics in conservation biology—a wider role 348
Summary 354
11 Microbial ecology and metagenomics 355
Microbial diversity and metagenomes 355
Outstanding issues in microbial ecology 358
Immunological approaches to microbial ecology 362
Ribosomal sequences and microbial ecology:
start of metagenomics 366
Genomic approaches to microbial ecology 378
Bacteria and the concept of species 382
Viral diversity 386
Phylogeography 387
Overview of microbial molecular ecology 389
Summary 390
12 Genomes 392
Introduction 392
First genome sequences 397
Human Genome Project and competing
sequencing strategies for eukaryotic genomes 399
Depth and breadth of genome sequencing 403
Genome reassembly and analysis 405
Genome annotation 413
Whole genomes or complete genomes? 414
Diploid genome sequences 415
Genome sequences of non-model organisms 416
Microbiomes 429
Summary 432
13 Genomics 434
Introduction 434
Comparative genomics 435
Genome architecture and gene expression 438
Evolutionary genomics 442
Phylogenomics 443
Genetic variability 446
Population genomics 448
Conservation genomics 449
Adaptation 451
Spéciation 452
Transcriptomics 456
Proteomics 457
Metabolomics 461
Epigenomics 462
Genome editing 463
Molecular ecology comes of age 469
Summary 470
References 472
Index 519
|
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| spelling | Rowe, Graham Verfasser aut An introduction to molecular ecology Graham Rowe, Michael Sweet, Trevor Beebee Third edition Oxford Oxford University Press [2017] viii, 535 Seiten Illustrationen, Diagramme txt rdacontent n rdamedia nc rdacarrier 2. Auflage unter dem Titel: Beebee, Trevor J.C.: An introduction to molecular ecology Biologie moléculaire ram Écologie moléculaire Écologie moléculaire ram Écologie ram Ökologie (DE-588)4043207-5 gnd rswk-swf Molekularbiologie (DE-588)4039983-7 gnd rswk-swf (DE-588)4123623-3 Lehrbuch gnd-content Ökologie (DE-588)4043207-5 s Molekularbiologie (DE-588)4039983-7 s DE-604 Sweet, Michael Verfasser aut Beebee, Trevor J. C. ca. 20./21. Jh. Verfasser (DE-588)1089165293 aut Digitalisierung UB Regensburg - ADAM Catalogue Enrichment application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=028681184&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Rowe, Graham Sweet, Michael Beebee, Trevor J. C. ca. 20./21. Jh An introduction to molecular ecology Biologie moléculaire ram Écologie moléculaire Écologie moléculaire ram Écologie ram Ökologie (DE-588)4043207-5 gnd Molekularbiologie (DE-588)4039983-7 gnd |
| subject_GND | (DE-588)4043207-5 (DE-588)4039983-7 (DE-588)4123623-3 |
| title | An introduction to molecular ecology |
| title_auth | An introduction to molecular ecology |
| title_exact_search | An introduction to molecular ecology |
| title_full | An introduction to molecular ecology Graham Rowe, Michael Sweet, Trevor Beebee |
| title_fullStr | An introduction to molecular ecology Graham Rowe, Michael Sweet, Trevor Beebee |
| title_full_unstemmed | An introduction to molecular ecology Graham Rowe, Michael Sweet, Trevor Beebee |
| title_short | An introduction to molecular ecology |
| title_sort | an introduction to molecular ecology |
| topic | Biologie moléculaire ram Écologie moléculaire Écologie moléculaire ram Écologie ram Ökologie (DE-588)4043207-5 gnd Molekularbiologie (DE-588)4039983-7 gnd |
| topic_facet | Biologie moléculaire Écologie moléculaire Écologie Ökologie Molekularbiologie Lehrbuch |
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