Genomic perspectives on evolution in the holoparasite hydnora visseri (hydnoraceae, piperales):
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| 1. Verfasser: | |
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| Format: | Abschlussarbeit Buch |
| Sprache: | English |
| Veröffentlicht: |
2015
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| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | 90 Bl. Ill., graph. Darst. |
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Datensatz im Suchindex
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| adam_text | TABLE OF CONTENTS
ACKNOWLEDGEMENTS 5
INTRODUCTION 6
CHAPTER 1
SINGLE-COPY NUCLEAR GENES PLACE HAUSTORIAL HYDNORACEAE WITHIN PIPERALES
AND
REVEAL A CRETACEOUS ORIGIN OF MULTIPLE PARASITIC ANGIOSPERM LINEAGES
1.1. ABSTRACT 9
1
.2.
I
NTRODUCTION 9
1.3. RESULTS AND DISCUSSION 12
1.3.1. EXPLORING
SINGLE-COPY NUCLEAR GENES IN HYDNORACEAE 12
1.3.2.
THE TEMPORAL ORIGIN OF PARASITISM ACROSS ANGIOSPERMS 18
1.3.3. EVOLUTIONARY TRENDS IN PARASITIC ANGIOSPERMS 23
1.4. CONCLUSIONS 28
1.5. MATERIAL AND METHODS 29
1.5.1.
GENERATION OF HYDNORA VISSERI TRANSCRIPTOMIC DATA 29
1.5.2.
THE 19-GENE-MATRIX 30
1.5.3. PHYLOGENETIC RECONSTRUCTION 30
1.5.4. MOLECULAR DATING 31
1.5.5. RELATIVE
RATES ESTIMATION 33
1.6. ACKNOWLEDGEMENTS 34
1
.7.
S
UPPLEMENTAL
M
ATERIAL 35
1.7.1.
SUPPLEMENTAL FIGURES 35
HTTP://D-NB.INFO/1074377427
CHAPTER 2
DETECTING AND CHARACTERIZING THE HIGHLY DIVERGENT PLASTID GENOME OF
NONPHOTOSYNTHETIC HYDNORA VISSERI (HYDNORACEAE)
2.1. ABSTRACT 46
2.2. INTRODUCTION 47
2.3. RESULTS 53
2.3.1.
PLASTIDS OF HYDNORA PRODUCE STARCH GRANULES 53
2.3.2. EVIDENCE
FOR A HIGHLY DIVERGENT PLASTID GENOME OF QUADRIPARTITE STRUCTURE IN
HYDNORA
VISSERI 54
2.3.3.
THE HYDNORA VISSERI PLASTOME ENCODES JUST 24 GENES 61
2.3.4. EVIDENCE
FOR FUNCTIONALITY OF THE HYDNORA PLASTOME 61
2.4. DISCUSSION 64
2.4.1. IS THE HYDNORA PLASTID GENOME A MINIMAL GENOME? 64
2.4.2. IS THERE FUNCTIONAL TRANSFER OF PLASTID GENES TO OTHER
ORGANELLES? 69
2.4.3
.WHY IS A PLASTID GENOME EXPECTED? 70
2.5. CONCLUSION 72
2.6. MATERIAL AND METHODS 73
2.6.1. PLANT
MATERIAL, DNA AND RNA
EXTRACTION, LIBRARY PREPARATION, SEQUENCING 73
2.6.2.
ASSEMBLY, READ MAPPING 74
2.6.3.
ANNOTATION 74
2.6.4. PHYLOGENETIC
ANALYSES 75
2
.7. A
CKNOWLEDGEMENTS
76
2.8. SUPPLEMENTAL MATERIAL 76
2.8.1.
SUPPLEMENTAL FIGURES 76
REFERENCES 79
EIGENSTANDIGKEITSERKLARUNG 90
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| spelling | Naumann, Julia 1984- Verfasser (DE-588)1073727521 aut Genomic perspectives on evolution in the holoparasite hydnora visseri (hydnoraceae, piperales) von Julia Naumann (geb. Simon) 2015 90 Bl. Ill., graph. Darst. txt rdacontent n rdamedia nc rdacarrier Dresden, Techn. Univ., Diss., 2015 Genanalyse (DE-588)4200230-8 gnd rswk-swf Phylogenie (DE-588)4076110-1 gnd rswk-swf Hydnoraceae (DE-588)4756941-4 gnd rswk-swf (DE-588)4113937-9 Hochschulschrift gnd-content Hydnoraceae (DE-588)4756941-4 s Phylogenie (DE-588)4076110-1 s Genanalyse (DE-588)4200230-8 s DE-188 DNB Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=028117434&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Naumann, Julia 1984- Genomic perspectives on evolution in the holoparasite hydnora visseri (hydnoraceae, piperales) Genanalyse (DE-588)4200230-8 gnd Phylogenie (DE-588)4076110-1 gnd Hydnoraceae (DE-588)4756941-4 gnd |
| subject_GND | (DE-588)4200230-8 (DE-588)4076110-1 (DE-588)4756941-4 (DE-588)4113937-9 |
| title | Genomic perspectives on evolution in the holoparasite hydnora visseri (hydnoraceae, piperales) |
| title_auth | Genomic perspectives on evolution in the holoparasite hydnora visseri (hydnoraceae, piperales) |
| title_exact_search | Genomic perspectives on evolution in the holoparasite hydnora visseri (hydnoraceae, piperales) |
| title_full | Genomic perspectives on evolution in the holoparasite hydnora visseri (hydnoraceae, piperales) von Julia Naumann (geb. Simon) |
| title_fullStr | Genomic perspectives on evolution in the holoparasite hydnora visseri (hydnoraceae, piperales) von Julia Naumann (geb. Simon) |
| title_full_unstemmed | Genomic perspectives on evolution in the holoparasite hydnora visseri (hydnoraceae, piperales) von Julia Naumann (geb. Simon) |
| title_short | Genomic perspectives on evolution in the holoparasite hydnora visseri (hydnoraceae, piperales) |
| title_sort | genomic perspectives on evolution in the holoparasite hydnora visseri hydnoraceae piperales |
| topic | Genanalyse (DE-588)4200230-8 gnd Phylogenie (DE-588)4076110-1 gnd Hydnoraceae (DE-588)4756941-4 gnd |
| topic_facet | Genanalyse Phylogenie Hydnoraceae Hochschulschrift |
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