Integrated molecular evolution:
Gespeichert in:
| 1. Verfasser: | |
|---|---|
| Format: | Buch |
| Sprache: | English |
| Veröffentlicht: |
Boca Raton [u.a.]
CRC Press
2012
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| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | Literaturverz. S. 337 - 341 |
| Beschreibung: | XV, 359 S. Ill., zahlr. graph. Darst. 1 CD-ROM (12 cm) |
| ISBN: | 9781439819951 1439819955 |
Internformat
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Datensatz im Suchindex
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|---|---|
| adam_text | INTEGRATED
MOLECULAR
EVOLUTION
SCOTT ORLAND ROGERS
CRC Press
Taylor amp; Francis Group
Boca Raton London New York
CRC Press is an imprint of the
Taylor amp; Francis Group, an informa business
Contents
Preface xi
Acknowledgments xiii
About the Author xv
Chapter 1 Definitions of Life 1
Introduction 1
RNA and Life 4
Detecting Life 6
Defining Life 9
Imagining Cellular and Molecular Dimensions 14
Key Points 17
Chapter 2 Earth and Evolution 19
Introduction 19
What Is Evolution? 19
Earth History 22
A Short History of the Study of Evolution 31
Earth History as One Year 38
Key Points 40
Chapter 3 DNA - RNA -» Proteins 43
Introduction 43
Nucleic Acids 45
Translation 55
Amino Acids and Polypeptides 57
Lipids 59
Carbohydrates 59
Key Points 62
Chapter 4 The Central Dogma and Beyond 63
Introduction 63
Ribosomal RNA (rRNA) 63
Transfer RNA (tRNA) 72
Messenger RNA (mRNA) 73
Other Small Noncoding RNA (ncRNA) 77
Beyond the Central Dogma 80
Key Points 80
VI Contents
Chapter 5 Evolution of Ribosomes, Ribosomal RNA, and Translation 81
Introduction 81
Ribosomes as Ribozymes 84
Translation 84
Origin of the Ribosome 87
Evolution of the Genetic Code 89
Why a Triplet Codon? 90
How Many rRNA Copies Are Needed? 92
Specific Mechanisms for Increasing rRNA Gene Copy Number 95
Complexity of Ribosomes 97
Key Points 100
Chapter 6 DNA Replication 101
Introduction 101
Variations of Replication 106
Topology during Replication 113
Replication of Chromosomes 113
Key Points 115
Chapter 7 DNA Segregation 117
Introduction 117
Variations on DNA Segregation in Bacteria (and Archaea) 117
Mitosis 120
Variations on Mitosis and the Cell Cycle 123
Variations on Chromosome Number 125
Changes in DNA Amount during the Cell Cycle 127
Meiosis 130
Key Points 133
Chapter 8 Changes to DNA 135
Introduction 135
Causes of Mutations 139
Mutation during Replication 145
Effects of Mutations 146
DNA Repair 147
Genetic Recombination 149
Key Points 153
Chapter 9 Viruses, Plasmids, Transposons, and Introns 155
Introduction 155
Viruses 161
Introns 165
Contents vii
Transposable Elements (Transposons and Retrotransposons) 176
Plasmids 179
Horizontal Gene Transfers 182
Key Points 183
Chapter 10 Species, Taxonomy, and Gene Flow 185
Introduction 185
What Is a Species? 185
Classification of Life 188
Reconstruction of Evolutionary History 190
Gene Flow 192
Key Points 194
Chapter 11 Multigene Families 195
Introduction 195
Ribosomal RNA Gene Family 197
Globin Gene Family 198
Bacterial Flagella Gene Family 204
Laccase Gene Family 205
Histone Gene Family 205
Orthologs and Paralogs 206
Key Points 207
Chapter 12 Phylogenetics: Evolutionary Reconstructions 209
Introduction 209
Tree Terminology 209
Choosing Genomic Region 211
Aligning Sequences 218
Other Considerations When Performing Phylogenetic Analyses 219
Analyzing the Aligned Sequence 220
UPGMA (Unweighted Pair Group Method
with Arithmetic Mean) 221
Neighbor Joining 222
Maximum Parsimony 222
Maximum Likelihood (ML) 225
Bayesian Phylogenetic Analysis 226
Bootstrapping 227
Vertical versus Horizontal Evolutionary Events 228
Key Points 229
Chapter 13 Genomes I: RNA Viruses 231
Introduction 231
C-Value Paradox 234
viii Contents
Genomics 235
RNA Virus Genome 235
HIV 236
Influenza A 240
Ebola 245
Key Points 247
Chapter 14 Genomes II: DNA Viruses 249
Introduction 249
Bacteriophage j X174 249
Bacteriophage lambda (X) 252
Bacteriophage T4 258
Mimivirus : 261
Key Points 264
Chapter 15 Genomes III: Bacteria and Archaea 265
Introduction 265
Escherichia coli 265
Photosynthetic Bacteria 268
Aquifex 270
Euryarchaeota 270
Crenarchaeota 274
Key Points 275
Chapter 16 Genomes IV: Mutualists and Pathogens 277
Introduction 277
Termite Gut Microbes 279
Smallest Bacterial Genome 279
Co-Resident Symbionts 282
Animal Parasite 283
Genome Mixing and Sorting 285
Key Points 287
Chapter 17 Genomes V: Endosymbionts and Organelles 289
Introduction 289
Intracellular Endosymbiont 289
Mitochondria 294
How Many Genes Make a Functional Mitochondrion? 298
Chloroplasts 302
How Many Genes Make a Functional Chloroplast? 304
Differential Development and Function 307
Chimeric Pathways 308
Contents ix
Endosymbioses Leading to Other Organelles Evolution 309
Key Points 311
Chapter 18 Genomes VI: Eukaryotic Genomes 313
Introduction 313
Origin of the Nucleus and Mitochondrion 314
Multicellularity 317
Chromalveolates 319
Ophisthokonta 320
Saccharomyces Cerevisiae 320
Caeorhabditis Elegans 323
Drosophila Melanogaster 326
Homo Sapiens ; 327
Plantae (archaeplastida) 329
Arabidopsis Thaliana 329
Oryza Sativa 332
Key Points 335
Bibliography 337
Index 343
|
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| indexdate | 2024-07-10T01:11:07Z |
| institution | BVB |
| isbn | 9781439819951 1439819955 |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-027480064 |
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| physical | XV, 359 S. Ill., zahlr. graph. Darst. 1 CD-ROM (12 cm) |
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| publisher | CRC Press |
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| spelling | Rogers, Scott O. 1953- Verfasser (DE-588)1019604166 aut Integrated molecular evolution Scott Orland Rogers Boca Raton [u.a.] CRC Press 2012 XV, 359 S. Ill., zahlr. graph. Darst. 1 CD-ROM (12 cm) txt rdacontent n rdamedia nc rdacarrier Literaturverz. S. 337 - 341 Evolution (DE-588)4071050-6 gnd rswk-swf Molekularbiologie (DE-588)4039983-7 gnd rswk-swf Phylogenie (DE-588)4076110-1 gnd rswk-swf Molecular evolution Evolution (DE-588)4071050-6 s Molekularbiologie (DE-588)4039983-7 s Phylogenie (DE-588)4076110-1 s DE-604 HEBIS Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=027480064&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Rogers, Scott O. 1953- Integrated molecular evolution Evolution (DE-588)4071050-6 gnd Molekularbiologie (DE-588)4039983-7 gnd Phylogenie (DE-588)4076110-1 gnd |
| subject_GND | (DE-588)4071050-6 (DE-588)4039983-7 (DE-588)4076110-1 |
| title | Integrated molecular evolution |
| title_auth | Integrated molecular evolution |
| title_exact_search | Integrated molecular evolution |
| title_full | Integrated molecular evolution Scott Orland Rogers |
| title_fullStr | Integrated molecular evolution Scott Orland Rogers |
| title_full_unstemmed | Integrated molecular evolution Scott Orland Rogers |
| title_short | Integrated molecular evolution |
| title_sort | integrated molecular evolution |
| topic | Evolution (DE-588)4071050-6 gnd Molekularbiologie (DE-588)4039983-7 gnd Phylogenie (DE-588)4076110-1 gnd |
| topic_facet | Evolution Molekularbiologie Phylogenie |
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