Protein structure prediction:
Gespeichert in:
Weitere Verfasser: | |
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Format: | Buch |
Sprache: | English |
Veröffentlicht: |
New York [u.a.]
Humana Press
2014
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Ausgabe: | 3. ed. |
Schriftenreihe: | Methods in molecular biology
1137 |
Schlagworte: | |
Online-Zugang: | Cover Inhaltsverzeichnis |
Beschreibung: | Includes bibliographical references and index |
Beschreibung: | XI, 253 S. Ill. |
ISBN: | 1493903659 9781493903658 |
Internformat
MARC
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250 | |a 3. ed. | ||
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490 | 0 | |a Springer protocols | |
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650 | 4 | |a Protein Conformation | |
650 | 4 | |a Models, Molecular | |
650 | 4 | |a Probability | |
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Datensatz im Suchindex
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adam_text | Titel: Protein structure prediction
Autor: Kihara, Daisuke
Jahr: 2014
Contents
Preface.......................................................... v
Contributors.......................................................... ix
1 Protein Structure Modeling with MODELLER........................ 1
Benjamin Webb and Andrej Sali
2 RaptorX server: A Resource for Template-Based
Protein Structure Modeling...................................... 17
Morten Kiillberg, Gohar Margaryan, Sheng Wang,
Jianzhu Ma, and Jinbo Xu
3 The MULTICOM Protein Tertiary Structure Prediction System........... 29
Jilong Li, Debswapna Bhattacharya, Renzhi Cao, Badri Adhikari,
Xin Deng, Jesse Eickholt, and Jianlin Cheng
4 Modeling of Protein Side-Chain Conformations with RASP.............. 43
Zhichao Miao, Yang Cao, and Taijiao Jiang
5 Direct Coupling Analysis for Protein Contact Prediction................. 55
Faruck Morcos, Terence Hwa, José N. Onuchic, and Martin Weigt
6 ITScorePro: An Efficient Scoring Program for Evaluating the Energy
Scores of Protein Structures for Structure Prediction.................... 71
Sheng-You Huang and Xiaoqin Zou
7 Assessing the Quality of Modelled 3D Protein Structures
Using the ModFOLD Server..................................... 83
Daniel Barry Roche, Maria Teresa Buenavista,
and Liam James McGuffin
8 3D-SURFER 2.0: Web Platform for Real-Time Search
and Characterization of Protein Surfaces............................. 105
Yi Xiong, Juan Esquivel-Rodriguez, Lee Sael, and Daisuke Kihara
9 SPOT-Seq-RNA: Predicting Protein-RNA Complex Structure
and RNA-Binding Function by Fold Recognition
and Binding Affinity Prediction.................................... 119
Yuedong Yang, Huiying Zhao, Jihua Wang, and Yaoqi Zhou
10 POODLE: Tools Predicting Intrinsically Disordered Regions
of Amino Acid Sequence......................................... 131
Kana Shimizu
11 Prediction of Intrinsic Disorder in Proteins Using MFDp2............... 147
Marcin J. Mizianty, Vladimir Uversky, and Lukasz Kurgan
vii
viii
Contents
12 Modeling Protein-Protein Complexes Using the HADDOCK
Webserver Modeling Protein Complexes with HADDOCK ............. 163
Gydo C.P. van Zundert and Alexandre M.J.J. Bonvin
13 Predicting the Structure of Protein-Protein Complexes
Using the SwarmDock Web Server................................. 181
Mieczyslaw Torchala and Paul A. Bates
14 DOCK/PIERR: Web Server for Structure Prediction
of Protein-Protein Complexes..................................... 199
Sbruthi Visrvanath, D.V.S. Ravikant, and Ron Elber
15 Pairwise and Multimeric Protein-Protein Docking
Using the LZerD Program Suite................................... 209
Juan Esquivel-Rodri¿fuez, Vianney Filos-Gonzalez,
Bin Li, and Daisuke Kihara
16 Protocols for Efficient Simulations of Long-Time Protein Dynamics
Using Coarse-Grained CABS Model................................ 235
Michal Jamroz, Andrzej Kolinski, and Sebastian Kmiecik
Index............................................................... 251
|
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id | DE-604.BV041775196 |
illustrated | Illustrated |
indexdate | 2024-07-10T01:05:07Z |
institution | BVB |
isbn | 1493903659 9781493903658 |
language | English |
oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-027221107 |
oclc_num | 915439424 |
open_access_boolean | |
owner | DE-11 |
owner_facet | DE-11 |
physical | XI, 253 S. Ill. |
publishDate | 2014 |
publishDateSearch | 2014 |
publishDateSort | 2014 |
publisher | Humana Press |
record_format | marc |
series | Methods in molecular biology |
series2 | Methods in molecular biology Springer protocols |
spelling | Protein structure prediction ed. by Daisuke Kihara 3. ed. New York [u.a.] Humana Press 2014 XI, 253 S. Ill. txt rdacontent n rdamedia nc rdacarrier Methods in molecular biology 1137 Springer protocols Includes bibliographical references and index Protein Conformation Models, Molecular Probability Proteine (DE-588)4076388-2 gnd rswk-swf Strukturaufklärung (DE-588)4183788-5 gnd rswk-swf Proteine (DE-588)4076388-2 s Strukturaufklärung (DE-588)4183788-5 s DE-604 Kihara, Daisuke edt Erscheint auch als Online-Ausgabe Kihara, Daisuke Protein Structure Prediction Methods in molecular biology 1137 (DE-604)BV035362695 1137 V:DE-576;X:springer image/jpeg http://swbplus.bsz-bw.de/bsz402328809cov.htm Cover HBZ Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=027221107&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
spellingShingle | Protein structure prediction Methods in molecular biology Protein Conformation Models, Molecular Probability Proteine (DE-588)4076388-2 gnd Strukturaufklärung (DE-588)4183788-5 gnd |
subject_GND | (DE-588)4076388-2 (DE-588)4183788-5 |
title | Protein structure prediction |
title_auth | Protein structure prediction |
title_exact_search | Protein structure prediction |
title_full | Protein structure prediction ed. by Daisuke Kihara |
title_fullStr | Protein structure prediction ed. by Daisuke Kihara |
title_full_unstemmed | Protein structure prediction ed. by Daisuke Kihara |
title_short | Protein structure prediction |
title_sort | protein structure prediction |
topic | Protein Conformation Models, Molecular Probability Proteine (DE-588)4076388-2 gnd Strukturaufklärung (DE-588)4183788-5 gnd |
topic_facet | Protein Conformation Models, Molecular Probability Proteine Strukturaufklärung |
url | http://swbplus.bsz-bw.de/bsz402328809cov.htm http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=027221107&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
volume_link | (DE-604)BV035362695 |
work_keys_str_mv | AT kiharadaisuke proteinstructureprediction |