RNA sequence, structure, and function: computational and bioinformatic methods
Gespeichert in:
| Format: | Buch |
|---|---|
| Sprache: | English |
| Veröffentlicht: |
New York, NY [u.a.]
Humana Press
2014
|
| Schriftenreihe: | Methods in molecular biology
1097 |
| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | XI, 533 S. graph. Darst. |
| ISBN: | 9781627037082 |
Internformat
MARC
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| 245 | 1 | 0 | |a RNA sequence, structure, and function |b computational and bioinformatic methods |c J. Gorodkin ... eds. |
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Datensatz im Suchindex
| _version_ | 1804151746559213568 |
|---|---|
| adam_text | Contents
Preface
..................................................................................
v
Contributors
........................................................................... ix
1
Concepts and Introduction to
RNA
Bioinformatics
.............................. 1
Jan Gorodkin,
Ivo
L.
Hofacker,
and Walter
L.
Ruzzo
2
The Principles of
RNA
Structure Architecture
.................................... 33
Christian Zwieb
3
The Determination of
RNA
Folding Nearest Neighbor
Parameters
..............,.......................................................... 45
Mirela Andronescu, Anne Condon, Douglas H. Turner,
and David H. Matbews
4
Energy-Directed
RNA
Structure Prediction
...................................... 71
Ivo
L.
Hof
acker
5
Introduction to Stochastic Context Free Grammars
.............................. 85
Robert
Gießerich
6
An Introduction to
RNA
Databases
............................................... 107
Marc P. Hoeppner, Lars E. Barquist, and Paul P. Gardner
7
Energy-Based
RNA
Consensus Secondary Structure Prediction
in Multiple Sequence Alignments
................................................. 125
Stefan Washietl,
Stephan
H.
Bernhart,
and Manolis Kellis
8
SCFGs in
RNA
Secondary Structure Prediction: A Hands-on Approach
........ 143
Zsuzsanna Sükösd,
Ebbe
S. Andersen, and
Rune Lynßse
9
Annotating Functional RNAs in Genomes Using Infernal
........................ 163
Eric P. Nawrocki
10
Class-Specific Prediction of ncRNAs
.............................................. 199
Peter
R
Stadler
11
Abstract Shape Analysis of
RNA
................................................... 215
Stefan
Janssen
and Robert
Gießerich
12
Introduction to
RNA
Secondary Structure Comparison
......................... 247
Stefanie Schirmer, Tann
Ponty,
and Robert
Gießerich
13
RNA
Structural Alignments, Part I: Sankoff-Based Approaches
for Structural Alignments
.......................................................... 275
Jakob Hull
Havßaard
and Jan Gorodkin
14
RNA
Structural Alignments, Part II: Non-Sankoff
Approaches for Structural Alignments
............................................. 291
Kiyoshi
Asai
and Michiaki Hamada
15
De Novo
Discovery of Structured ncRNA Motifs in Genomic Sequences
........ 303
Walter L.
Ruzzo
and Jan Gorodkin
VII
viii Contents
16
Phylogeny
and Evolution of
RNA
Structure
...................................... 319
Tanja Gesell
and Peter Schuster
17
The Art of Editing
RNA
Structurai
Alignments
.................................. 379
Ebbe
Sloth Andersen
18
Automated Modeling of
RNA
3D
Structure
...................................... 395
Kristian
Rother, Magdalena Rother, Pawel
Skiba,
and
Janusz
M.
Bujnicki
19
Computational Prediction of RNA-RNA Interactions
............................ 417
Rolf Backofen
20
Computational Prediction of MicroiHNA Genes
.................................. 437
Jana
Hertel,
David Langenberger, and Peter
F. Stadler
21
MicroRNA Target Finding by Comparative Genomics
........................... 457
Robin C. Friedman and Christopher B.
Bürge
22
Bioinformatics of siRNA Design
.................................................. 477
Hakim Tafer
23
RNA-Protein Interactions: An Overview
......................................... 491
Angela
Re, Te jal Joshi, Eleonora
Kulberkyte, Qua id Morris,
and Christopher T. Workman
Index
.................................................................................... 523
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| isbn | 9781627037082 |
| language | English |
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| series | Methods in molecular biology |
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| spelling | RNA sequence, structure, and function computational and bioinformatic methods J. Gorodkin ... eds. New York, NY [u.a.] Humana Press 2014 XI, 533 S. graph. Darst. txt rdacontent n rdamedia nc rdacarrier Methods in molecular biology 1097 Springer protocols RNS (DE-588)4076759-0 gnd rswk-swf Bioinformatik (DE-588)4611085-9 gnd rswk-swf Methode (DE-588)4038971-6 gnd rswk-swf (DE-588)4143413-4 Aufsatzsammlung gnd-content RNS (DE-588)4076759-0 s Bioinformatik (DE-588)4611085-9 s Methode (DE-588)4038971-6 s b DE-604 Gorodkin, Jan Sonstige oth Methods in molecular biology 1097 (DE-604)BV035362695 1097 Digitalisierung UB Regensburg - ADAM Catalogue Enrichment application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=027010053&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | RNA sequence, structure, and function computational and bioinformatic methods Methods in molecular biology RNS (DE-588)4076759-0 gnd Bioinformatik (DE-588)4611085-9 gnd Methode (DE-588)4038971-6 gnd |
| subject_GND | (DE-588)4076759-0 (DE-588)4611085-9 (DE-588)4038971-6 (DE-588)4143413-4 |
| title | RNA sequence, structure, and function computational and bioinformatic methods |
| title_auth | RNA sequence, structure, and function computational and bioinformatic methods |
| title_exact_search | RNA sequence, structure, and function computational and bioinformatic methods |
| title_full | RNA sequence, structure, and function computational and bioinformatic methods J. Gorodkin ... eds. |
| title_fullStr | RNA sequence, structure, and function computational and bioinformatic methods J. Gorodkin ... eds. |
| title_full_unstemmed | RNA sequence, structure, and function computational and bioinformatic methods J. Gorodkin ... eds. |
| title_short | RNA sequence, structure, and function |
| title_sort | rna sequence structure and function computational and bioinformatic methods |
| title_sub | computational and bioinformatic methods |
| topic | RNS (DE-588)4076759-0 gnd Bioinformatik (DE-588)4611085-9 gnd Methode (DE-588)4038971-6 gnd |
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