Algorithms in bioinformatics: 11th international workshop, WABI 2011, Saarbrücken, Germany, September 5 - 7, 2011 ; proceedings
Gespeichert in:
Format: | Tagungsbericht Buch |
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Sprache: | English |
Veröffentlicht: |
Berlin [u.a.]
Springer
2011
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Schriftenreihe: | Lecture notes in computer science
6833 |
Schlagworte: | |
Online-Zugang: | Inhaltstext Inhaltsverzeichnis |
Beschreibung: | Literaturangaben |
Beschreibung: | XIII, 378 S. graph. Darst. 24 cm |
ISBN: | 9783642230370 3642230377 |
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IMAGE 1
TABLE OF CONTENTS
AUTOMATED SEGMENTATION OF DNA SEQUENCES WITH COMPLEX EVOLUTIONARY
HISTORIES 1
BRONA BREJOVA, MICHAL BURGER, AND TOMAS VINAR
TOWARDS A PRACTICAL O(N LOG N) PHYLOGENY ALGORITHM 14
DANIEL G. BROWN AND JAKUB TRUSZKOWSKI
A MATHEMATICAL PROGRAMMING APPROACH TO MARKER-ASSISTED GENE PYRAMIDING
26
STEFAN CANZAR AND MOHAMMED EL-KEBIR
LOCALIZED GENOME ASSEMBLY FROM READS TO SCAFFOLDS: PRACTICAL TRAVERSAL
OF THE PAIRED STRING GRAPH 39
RAYAN CHIKHI AND DOMINIQUE LAVENIER
STOCHASTIC ERRORS VS. MODELING ERRORS IN DISTANCE BASED PHYLOGENETIC
RECONSTRUCTIONS (EXTENDED ABSTRACT) 49
DANIEL DOERR, HAN GRONAU, SHLOMO MORAN, AND IRAD YAVNEH
CONSTRUCTING LARGE CONSERVATIVE SUPERTREES 61
JIANRONG DONG AND DAVID FERNANDEZ-BACA
PEPCRAWLER: A FAST RRT-LIKE ALGORITHM FOR HIGH-RESOLUTION REFINEMENT AND
BINDING-AFFINITY ESTIMATION OF PEPTIDE INHIBITORS (ABSTRACT) 73
ELAD DONSKY AND HAIM J. WOLFSON
REMOVING NOISE FROM GENE TREES 76
ANDREA DOROFTEI AND NADIA EL-MABROUK
BOOSTING BINDING SITES PREDICTION USING GENE'S POSITIONS 92 MOHAMED
ELATI, RIM FEKIH, REMY NICOLLE, IVAN JUNIER, JOAN HERISSON, AND FRANCOIS
KEPES
CONSTRUCTING PERFECT PHYLOGENIES AND PROPER TRIANGULATIONS FOR
THREE-STATE CHARACTERS 104
ROB GYSEL, FUMEI LAM, AND DAN GUSFIELD
ON A CONJECTURE ABOUT COMPATIBILITY OF MULTI-STATES CHARACTERS 116
MICHEL HABIB AND THU-HIEN TO
LEARNING PROTEIN FUNCTIONS FROM BI-RELATIONAL GRAPH OF PROTEINS AND
FUNCTION ANNOTATIONS 128
JONATHAN QIANG JIANG
BIBLIOGRAFISCHE INFORMATIONEN HTTP://D-NB.INFO/1013511050
DIGITALISIERT DURCH
IMAGE 2
XII TABLE OF CONTENTS
GRAPH-BASED DECOMPOSITION OF BIOCHEMICAL REACTION NETWORKS INTO MONOTONE
SUBSYSTEMS 139
HANS-MICHAEL KALTENBACH, SIMONA CONSTANTINESCU, JUSTIN FEIGELMAN, AND
JOERG STELLING
SEED-SET CONSTRUCTION BY EQUI-ENTROPY PARTITIONING FOR EFFICIENT AND
SENSITIVE SHORT-READ MAPPING 151
KOUICHI KIMURA, ASAKO KOIKE, AND KENTA NAKAI
A P R A C T I C AL A L G O R I T HM FOR A N C E S T R AL R E A R R A N G
E M E NT R E C O N S T R U C T I ON . . . 1 63
JAKUB KOVAC, BRONA BREJOVA, AND TOMAS VINAR
BOOTSTRAPPING PHYLOGENIES INFERRED FROM REARRANGEMENT DATA 175 YU LIN,
VAIBHAV RAJAN, AND BERNARD M.E. MORET
SPEEDING UP BAYESIAN HMM BY THE FOUR RUSSIANS METHOD 188
MD PAVEL MAHMUD AND ALEXANDER SCHLIEP
USING DOMINANCES FOR SOLVING THE PROTEIN FAMILY IDENTIFICATION PROBLEM
201
NOEL MALOD-DOGNIN, MATHILDE LE BOUDIC-JAMIN, PRITISH KAMATH, AND RUMEN
ANDONOV
MAXIMUM LIKELIHOOD ESTIMATION OF INCOMPLETE GENOMIC SPECTRUM FROM HTS
DATA 213
SERGHEI MANGUL, IRINA ASTROVSKAYA, MARIUS NICOLAE, BASSAM TORK, ION
MANDOIU, AND ALEX ZELIKOVSKY
ALGORITHM FOR IDENTIFICATION OF PIECEWISE SMOOTH HYBRID SYSTEMS:
APPLICATION TO EUKARYOTIC CELL CYCLE REGULATION 225
VINCENT NOEL, SERGEI VAKULENKO, AND OVIDIU RADULESCU
PARSIMONIOUS RECONSTRUCTION OF NETWORK EVOLUTION 237
ROB PAIRO, EMRE SEFER, JUSTIN MALIN, GUILLAUME MARCAIS, SAKET NAVLAKHA,
AND CARL KINGSFORD
A COMBINATORIAL FRAMEWORK FOR DESIGNING (PSEUDOKNOTTED) RNA ALGORITHMS
250
YANN PONTY AND CEDRIC SAULE
INDEXING FINITE LANGUAGE REPRESENTATION OF POPULATION GENOTYPES 270
JOUNI SIREN, NIKO VAELIMAEKI, AND VELI MAEKINEN
EFFICIENTLY SOLVABLE PERFECT PHYLOGENY PROBLEMS ON BINARY AND FC-STATE
DATA WITH MISSING VALUES 282
KRISTIAN STEVENS AND BONNIE KIRKPATRICK
SEPARATING METAGENOMIC SHORT READS INTO GENOMES VIA CLUSTERING (EXTENDED
ABSTRACT) 298
OLGA TANASEICHUK, JAMES BORNEMAN, AND TAO JIANG
IMAGE 3
TABLE OF CONTENTS XIII
FINDING DRIVER PATHWAYS IN CANCER: MODELS AND ALGORITHMS 314 FABIO
VANDIN, ELI UPFAL, AND BENJAMIN J. RAPHAEL
CLUSTERING WITH OVERLAP FOR GENETIC INTERACTION NETWORKS VIA LOCAL
SEARCH OPTIMIZATION 326
JOSEPH WHITNEY, JUDICE KOH, MICHAEL COSTANZO, GRANT BROWN, CHARLES
BOONE, AND MICHAEL BRUDNO
DYNAMIC PROGRAMMING ALGORITHMS FOR EFFICIENTLY COMPUTING COSEGMENTATIONS
BETWEEN BIOLOGICAL IMAGES 339
HANG XIAO, MELVIN ZHANG, AXEL MOSIG, AND HON WAI LEONG
GASTS: PARSIMONY SCORING UNDER REARRANGEMENTS 351
ANDREW WEI XU AND BERNARD M.E. MORET
OMG! ORTHOLOGS IN MULTIPLE GENOMES - COMPETING GRAPH-THEORETICAL
FORMULATIONS 364
CHUNFANG ZHENG, KRISTER SWENSON, ERIC LYONS, AND DAVID SANKOFF
AUTHOR INDEX 377 |
any_adam_object | 1 |
building | Verbundindex |
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dewey-search | 570.285 |
dewey-sort | 3570.285 |
dewey-tens | 570 - Biology |
discipline | Biologie Informatik |
format | Conference Proceeding Book |
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spelling | Algorithms in bioinformatics 11th international workshop, WABI 2011, Saarbrücken, Germany, September 5 - 7, 2011 ; proceedings Teresa M. Przytycka ... (eds.) Berlin [u.a.] Springer 2011 XIII, 378 S. graph. Darst. 24 cm txt rdacontent n rdamedia nc rdacarrier Lecture notes in computer science 6833 : Lecture notes in bioinformatics Literaturangaben Algorithmus (DE-588)4001183-5 gnd rswk-swf Bioinformatik (DE-588)4611085-9 gnd rswk-swf (DE-588)1071861417 Konferenzschrift 2011 Saarbrücken gnd-content Bioinformatik (DE-588)4611085-9 s Algorithmus (DE-588)4001183-5 s DE-604 Przytycka, Teresa M. Sonstige oth WABI 11 2011 Saarbrücken Sonstige (DE-588)16180628-4 oth Erscheint auch als Online-Ausgabe Algorithms in Bioinformatics Lecture notes in computer science 6833 (DE-604)BV000000607 6833 X:MVB text/html http://deposit.dnb.de/cgi-bin/dokserv?id=3853517&prov=M&dok_var=1&dok_ext=htm Inhaltstext DNB Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=024428346&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
spellingShingle | Algorithms in bioinformatics 11th international workshop, WABI 2011, Saarbrücken, Germany, September 5 - 7, 2011 ; proceedings Lecture notes in computer science Algorithmus (DE-588)4001183-5 gnd Bioinformatik (DE-588)4611085-9 gnd |
subject_GND | (DE-588)4001183-5 (DE-588)4611085-9 (DE-588)1071861417 |
title | Algorithms in bioinformatics 11th international workshop, WABI 2011, Saarbrücken, Germany, September 5 - 7, 2011 ; proceedings |
title_auth | Algorithms in bioinformatics 11th international workshop, WABI 2011, Saarbrücken, Germany, September 5 - 7, 2011 ; proceedings |
title_exact_search | Algorithms in bioinformatics 11th international workshop, WABI 2011, Saarbrücken, Germany, September 5 - 7, 2011 ; proceedings |
title_full | Algorithms in bioinformatics 11th international workshop, WABI 2011, Saarbrücken, Germany, September 5 - 7, 2011 ; proceedings Teresa M. Przytycka ... (eds.) |
title_fullStr | Algorithms in bioinformatics 11th international workshop, WABI 2011, Saarbrücken, Germany, September 5 - 7, 2011 ; proceedings Teresa M. Przytycka ... (eds.) |
title_full_unstemmed | Algorithms in bioinformatics 11th international workshop, WABI 2011, Saarbrücken, Germany, September 5 - 7, 2011 ; proceedings Teresa M. Przytycka ... (eds.) |
title_short | Algorithms in bioinformatics |
title_sort | algorithms in bioinformatics 11th international workshop wabi 2011 saarbrucken germany september 5 7 2011 proceedings |
title_sub | 11th international workshop, WABI 2011, Saarbrücken, Germany, September 5 - 7, 2011 ; proceedings |
topic | Algorithmus (DE-588)4001183-5 gnd Bioinformatik (DE-588)4611085-9 gnd |
topic_facet | Algorithmus Bioinformatik Konferenzschrift 2011 Saarbrücken |
url | http://deposit.dnb.de/cgi-bin/dokserv?id=3853517&prov=M&dok_var=1&dok_ext=htm http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=024428346&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
volume_link | (DE-604)BV000000607 |
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