Serum/plasma proteomics: methods and protocols
Gespeichert in:
| Format: | Buch |
|---|---|
| Sprache: | English |
| Veröffentlicht: |
New York
Springer
2011
|
| Schriftenreihe: | Methods in molecular biology
728 |
| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | Includes bibliographical references and index |
| Beschreibung: | xiv, 397 S. Ill, graph. Darst. 27 cm |
| ISBN: | 9781617790676 |
Internformat
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| 245 | 1 | 0 | |a Serum/plasma proteomics |b methods and protocols |c ed. by Richard J. Simpson and David W. Greening |
| 264 | 1 | |a New York |b Springer |c 2011 | |
| 300 | |a xiv, 397 S. |b Ill, graph. Darst. |c 27 cm | ||
| 336 | |b txt |2 rdacontent | ||
| 337 | |b n |2 rdamedia | ||
| 338 | |b nc |2 rdacarrier | ||
| 490 | 1 | |a Methods in molecular biology |v 728 | |
| 500 | |a Includes bibliographical references and index | ||
| 650 | 4 | |a Serum | |
| 650 | 4 | |a Blood plasma | |
| 650 | 4 | |a Proteomics | |
| 650 | 4 | |a Plasma | |
| 650 | 4 | |a Blood Proteins | |
| 650 | 4 | |a Proteomics / methods | |
| 700 | 1 | |a Simpson, Richard J. |e Sonstige |4 oth | |
| 830 | 0 | |a Methods in molecular biology |v 728 |w (DE-604)BV035362695 |9 728 | |
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Datensatz im Suchindex
| _version_ | 1804147963566489600 |
|---|---|
| adam_text | Titel: Serum plasma proteomics
Autor: Simpson, Richard J.
Jahr: 2011
Contents
Preface............................................................. p
Contributors......................................................... xi
Part I Fractionation Strategies for In-depth Blood
Proteome Analysis
1 Plasma Biomarker Discovery Using 3D Protein Profiling Coupled
with Label-Free Quantitation........................................ 3
Lynn A. Beer, Hsin-Tao Tang, Kurt T. Bamhart,
and David W. Speicher
2 Intact Protein Separation by One- and Two-Dimensional Liquid
Chromatography for the Comparative Proteomic Separation of
Partitioned Serum or Plasma......................................... 29
Simon Sheng, Helena Skalnikova, Andrew Meng, John Tra,
Qin Tu, Allen Everett, and Jennifer Van Eyk
3 In-Depth Analysis of a Plasma or Serum Proteome Using a 4D
Protein Profiling Method........................................... 47
Hsin-Yao Tang, Lynn A. Beer, and David W. Speicher
4 Intact-Protein Analysis System for Discovery of Serum-Based
Disease Biomarkers................................................ 69
Hong Wang and Samir Hanash
5 Model-Based Discovery of Circulating Biomarkers........................ 87
Maryann S. Vogelsang, Kian Kani, Jonathan E. Katz,
and Parag Mallick
6 Low-Molecular Weight Plasma Proteome Analysis Using
Centrifugal Ultrafiltration........................................... 109
David W. Greening and Richard J. Simpson
7 High-Throughput Analysis of Glycoproteins from Plasma................... 125
Yan Li and Hui Zhang
Part II Blood Collection and Handling Strategies
8 Minimizing Preanalytical Variation of Plasma Samples by Proper
Blood Collection and Handling...................................... 137
Jizu Yi, David Crafi, and Craig A. Gelfand
9 Collection and Handling of Blood Specimens for Peptidomics............... 151
Harald Tammen and Rüdiger Hess
10 Investigation of Peptide Biomarker Stability in Plasma
Samples Using Time-Course MS Analysis............................... 161
Jizu Yi, Zhaoxia Liu, Craig A. Gelfand, and David Craft
viii Contents
Part III Methods for Quantitative Assaying of Blood-Based
Biomarkers
11 Biomarker Validation in Blood Specimens by Selected
Reaction Monitoring Mass Spectrometry of AT-Glycosites................... 179
Reto Ossola, Ralph Schiess, Paola Picotti, Oliver Rinner,
Lukas Reiter, and Ruedi Aebersold
12 A Fluorescent Microsphere-Based Method for Assay
of Multiple Analytes in Plasma....................................... 195
Oliver K. Bernhard, Rommel A. Mathias, Thomas W. Barnes,
and Richard J. Simpson
13 Immuno-Mass Spectrometry: Quantification of Low-Abundance
Proteins in Biological Fluids......................................... 207
Vathany Kulasingam, Christopher R. Smith, Ihor Batruch,
and Eleftherios P. Diamandis
14 Qualitative and Quantitative Analysis of Glycated Proteins in Human
Plasma by Glucose Isotopic Labeling with 13C6-Reducing Sugars.............. 219
Feliciano Priego-Capote, Maria Ramirez-Boo, Denis Hochstrasser,
and Jean-Charles Sanchez
Part IV Proteome Analysis of Blood Cell Components,
Vesicles, and Blood-Related Fluids
15 Exosome Isolation for Proteomic Analyses and RNA Profiling............... 235
Douglas D. Taylor, Wolfgang Zacharias, and Cicek Gercel-Taylor
16 Extraction and Proteome Analysis of Liver Tissue Interstitial Fluid............ 247
Wei Sun, Ying Jiang, and Fuchu He
17 A Protocol for the Preparation of Cryoprecipitate
and Cryodepleted Plasma........................................... 259
Rosemary L. Sparrow, David W. Greening, and Richard J. Simpson
18 Preparation of Platelet Concentrates................................... 267
David W. Greening, Rosemary L. Sparrow, and Richard J. Simpson
19 Phosphoproteome Analysis of the Platelet Plasma Membrane................ 279
Thomas Premsler, Urs Lewandrowski, Albert Sickmann,
and René Peiman Zahedi
Part V Bioinformatic Analysis of Blood Proteins and Peptides
20 Statistical Design and Analysis of Label-free LC-MS Proteomic
Experiments: A Case Study of Coronary Artery Disease.................... 293
Timothy Clough, Siegmund Braun, Vladimir Fokin, Ilka Ott,
Susanne Ragg, Günther Schadow, and Olga Vitek
21 Data Management in Mass Spectrometry-Based Proteomics................. 321
Lennart Martens
Contents ¡x
22 Bioinformatics Challenges in the Proteomic Analysis of Human Plasma........ 333
Joseph M. Foster and Lennart Martens
23 Using the Human Plasma PeptideAtlas to Study Human Plasma Proteins....... 349
Terry Farrah, Eric W. Deutsch, and Ruedi Aebersold
Appendix............................................................... 375
Index.............................................................. 395
|
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| id | DE-604.BV039129189 |
| illustrated | Illustrated |
| indexdate | 2024-07-09T23:59:35Z |
| institution | BVB |
| isbn | 9781617790676 |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-024147575 |
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| physical | xiv, 397 S. Ill, graph. Darst. 27 cm |
| publishDate | 2011 |
| publishDateSearch | 2011 |
| publishDateSort | 2011 |
| publisher | Springer |
| record_format | marc |
| series | Methods in molecular biology |
| series2 | Methods in molecular biology |
| spelling | Serum/plasma proteomics methods and protocols ed. by Richard J. Simpson and David W. Greening New York Springer 2011 xiv, 397 S. Ill, graph. Darst. 27 cm txt rdacontent n rdamedia nc rdacarrier Methods in molecular biology 728 Includes bibliographical references and index Serum Blood plasma Proteomics Plasma Blood Proteins Proteomics / methods Simpson, Richard J. Sonstige oth Methods in molecular biology 728 (DE-604)BV035362695 728 HBZ Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=024147575&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Serum/plasma proteomics methods and protocols Methods in molecular biology Serum Blood plasma Proteomics Plasma Blood Proteins Proteomics / methods |
| title | Serum/plasma proteomics methods and protocols |
| title_auth | Serum/plasma proteomics methods and protocols |
| title_exact_search | Serum/plasma proteomics methods and protocols |
| title_full | Serum/plasma proteomics methods and protocols ed. by Richard J. Simpson and David W. Greening |
| title_fullStr | Serum/plasma proteomics methods and protocols ed. by Richard J. Simpson and David W. Greening |
| title_full_unstemmed | Serum/plasma proteomics methods and protocols ed. by Richard J. Simpson and David W. Greening |
| title_short | Serum/plasma proteomics |
| title_sort | serum plasma proteomics methods and protocols |
| title_sub | methods and protocols |
| topic | Serum Blood plasma Proteomics Plasma Blood Proteins Proteomics / methods |
| topic_facet | Serum Blood plasma Proteomics Plasma Blood Proteins Proteomics / methods |
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