Molecular ecology:
Gespeichert in:
| Hauptverfasser: | , , |
|---|---|
| Format: | Buch |
| Sprache: | English |
| Veröffentlicht: |
Chichester [u.a.]
Wiley-Blackwell
2011
|
| Ausgabe: | 2. ed. |
| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | Hier auch später erschienene, unveränderte Nachdrucke |
| Beschreibung: | XII, 449 S. Ill., graph. Darst. |
| ISBN: | 9780470748343 9780470748336 |
Internformat
MARC
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| 100 | 1 | |a Freeland, Joanna R. |d 1965- |e Verfasser |0 (DE-588)131667173 |4 aut | |
| 245 | 1 | 0 | |a Molecular ecology |c Joanna R. Freeland and Heather Kirk ; Stephen Petersen |
| 250 | |a 2. ed. | ||
| 264 | 1 | |a Chichester [u.a.] |b Wiley-Blackwell |c 2011 | |
| 300 | |a XII, 449 S. |b Ill., graph. Darst. | ||
| 336 | |b txt |2 rdacontent | ||
| 337 | |b n |2 rdamedia | ||
| 338 | |b nc |2 rdacarrier | ||
| 500 | |a Hier auch später erschienene, unveränderte Nachdrucke | ||
| 650 | 4 | |a Molecular ecology | |
| 650 | 0 | 7 | |a Ökologie |0 (DE-588)4043207-5 |2 gnd |9 rswk-swf |
| 650 | 0 | 7 | |a Molekularbiologie |0 (DE-588)4039983-7 |2 gnd |9 rswk-swf |
| 689 | 0 | 0 | |a Ökologie |0 (DE-588)4043207-5 |D s |
| 689 | 0 | 1 | |a Molekularbiologie |0 (DE-588)4039983-7 |D s |
| 689 | 0 | |5 DE-604 | |
| 700 | 1 | |a Kirk, Heather |e Verfasser |0 (DE-588)1013445783 |4 aut | |
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| 999 | |a oai:aleph.bib-bvb.de:BVB01-021180253 | ||
Datensatz im Suchindex
| _version_ | 1804143889333878784 |
|---|---|
| adam_text | Molecular Ecology
Second Edition
Joanna R Freeland and Heather Kirk
Trent University
Stephen Petersen
Fisheries and Oceans Canada
WILEY-BLACKWELL
A John Wiley amp; Sons, Ltd , Publication
Contents
Preface xi
Acknowledgements xiii
Molecular Genetics in Ecology 01
What is molecular ecology? 01
The emergence of molecular ecology 02
Protein allozymes 0 4
Allozymes as genetic markers 0 6
An unlimited source of data 09
Mutation and recombination 1 0
Is genetic variation adaptive? 14
Polymerase chain reaction 1 5
Primers 18
Sources of DNA 20
Getting data from PCR 23
DNA sequencing 2 4
Second-generation sequencing 27
Third-generation sequencing 28
Quantitative PCR 2 9
Overview 3 L
Chapter summary 31
Useful websites and software 32
Further reading 33
Review quest ions 33
2 Molecular Markers in Ecology 35
Understanding molecular markers 35
Modes of inheritance 35
Nuclear versus organelle 36
Animal mitochondrial DNA 36
Plant mitochondrial DNA 39
Plastids, including chloroplast DNA 4 L
CONTENTS
Haploid chromosomes 44
Identifying hybrids 46
Uniparental markers: A cautionary note 48
Molecular markers 50
Co-dominant markers 51
Allozymes 52
RFLPs 54
DNA sequences 56
SNPs 60
Microsatellites 62
Dominant markers 67
RAPDs 68
AFLPs 69
Overview 72
Chapter summary 72
Useful websites and software 73
Further reading 74
Online activities 74
Review questions 75
Genetic Analysis of Single Populations 77
Why study single populations? 11
What is a population? 11
Quantifying genetic diversity 82
Hardy-Weinberg equilibrium 83
Estimates of genetic diversity 87
Haploid diversity 91
Choice of marker 92
What influences genetic diversity? 93
Genetic drift 93
What is effective population size? 94
Quantifying census population size 95
Quantifying effective population size 96
Single-Sample Estimators 96
Temporal method 98
Demographic influences on Ne 102
Sex ratios 103
Variation in reproductive success 104
Fluctuating population size 105
Ne genetic drift and genetic diversity 107
Population bottlenecks 109
Founder effects and invasive species 110
Natural selection 111
The major histocompatibility complex 114
Reproduction 116
Inbreeding 117
Polyploidy 119
CONTENTS
Overview
Chapter summary
Useful websites and software
Further reading
Online activities
Review questions
Genetic Analysis of Multiple Populations
Why study multiple populations?
Quantifying population subdivision
Genetic distance
F-statistics
Interpreting FST
Non-a priori identification of populations
Quantifying gene flow
Direct methods
Indirect methods
Assignment tests
What influences gene flow?
Barriers to dispersal
Landscape genetics
Metapopulations
Interspecific interactions
Hybridization
Population differentiation: genetic drift and natural selection
Gene flow and genetic drift
Gene flow and local adaptation
Drift versus selection
Patterns of molecular evolution
Discordant genetic differentiation
Clinal variations in allele frequencies: Fsr versus QST
Overview
Chapter summary
Useful websites and software
Further reading
Online activities
Review questions
Studying Ecologically Important Traits: Ecogenomics,
QTL Analysis, and Reverse Genetics 179
Studying ecologically important traits 179
cDNA libraries and ESTs 1 80
Microarrays 181
How do microarrays work? 182
CONTENTS
Probes
Verifying differences in gene expression
Microarray applications
Variation within individuals
Variation between species
Sequence differences
Differences in gene expression
Microarrays and community ecology of microorganisms
Microorganism functions
Microarrays and genotyping
Connecting genotype to phenotype
Reverse genetics
QTL analysis
Linkage mapping
QTL mapping
QTL mapping of ecologically important traits
Overview
Chapter summary
Useful websites and software
Further reading
Review questions
Phylogeography
What is phylogeography?
Molecular markers in phylogeography
Organelle versus nuclear markers
Repetitive versus non-repetitive markers
Neutral versus adaptive markers
Molecular clocks
Bifurcating trees
The coalescent
Applying the coalescent
Networks
Nested Clade Phylogeographic analysis and statistical phylogeography
The distributions of genetic lineages
Subdivided populations
Dispersal and vicariance
Comparative phylogeography
Regional concordance
Continental concordance
European post-glacial recolonization routes
Dispersal and invasive species
Allele sharing between species
Lineage sorting
Hybrid zones
Overview
CONTENTS ix
Chapter summary 266
Useful websites and software 267
Further reading 268
Online activities 268
Review questions -269
Behavioural Ecology 271
Why use molecules to study behaviour? 271
Mating systems 272
Parentage analysis 275
Extra-pair fertilizations 280
Who achieves EPFs? 284
Does environment influence EPFs? 285
Mate choice 286
Post-copulatory mate choice 288
Social breeding 289
Social insects 293
Manipulating sex ratios 295
Sex ratio conflicts 298
Sex-biased dispersal 299
Nuclear and mitochondrial markers 300
Relatedness 302
FST values 302
Assignment tests 304
Spatial autocorrelation 305
Concordant results 307
Predators and prey 309
Identifying prey 309
Predation and conservation 312
Overview 313
Chapter summary 314
Useful websites and software 315
Further reading 316
Online activities 316
Review questions 317
Conservation Genetics 319
The need for conservation 319
Taxonomy 322
Species concepts 322
DNA barcoding 324
Subspecies 331
Conservation units 332
Hybrids 333
Population size, genetic diversity and inbreeding 335
CONTENTS
Inbreeding depression 3 3 7
Heterozygosity fitness correlations 342
Self-fertilization 344
Inbreeding avoidance 345
Outbreeding depression 346
Translocations 348
Genetic rescue 349
Source populations 351
i Restoration genetics 354
Captive breeding 356
Maximizing genetic diversity 356
Captive inbreeding and outbreeding 358
Genetic diversityi banks 359
Overview 362
Chapter summary 362
Useful websites and software 363
Further reading 364
Online activities 365
Review questions 365
Glossary 367
Answers to Review Questions 385
References 395
Index 433
|
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| dewey-ones | 577 - Ecology |
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| dewey-search | 577 |
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| dewey-tens | 570 - Biology |
| discipline | Biologie |
| edition | 2. ed. |
| format | Book |
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| language | English |
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| spelling | Freeland, Joanna R. 1965- Verfasser (DE-588)131667173 aut Molecular ecology Joanna R. Freeland and Heather Kirk ; Stephen Petersen 2. ed. Chichester [u.a.] Wiley-Blackwell 2011 XII, 449 S. Ill., graph. Darst. txt rdacontent n rdamedia nc rdacarrier Hier auch später erschienene, unveränderte Nachdrucke Molecular ecology Ökologie (DE-588)4043207-5 gnd rswk-swf Molekularbiologie (DE-588)4039983-7 gnd rswk-swf Ökologie (DE-588)4043207-5 s Molekularbiologie (DE-588)4039983-7 s DE-604 Kirk, Heather Verfasser (DE-588)1013445783 aut Petersen, Stephen 1972- Verfasser (DE-588)1013445414 aut HEBIS Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=021180253&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Freeland, Joanna R. 1965- Kirk, Heather Petersen, Stephen 1972- Molecular ecology Molecular ecology Ökologie (DE-588)4043207-5 gnd Molekularbiologie (DE-588)4039983-7 gnd |
| subject_GND | (DE-588)4043207-5 (DE-588)4039983-7 |
| title | Molecular ecology |
| title_auth | Molecular ecology |
| title_exact_search | Molecular ecology |
| title_full | Molecular ecology Joanna R. Freeland and Heather Kirk ; Stephen Petersen |
| title_fullStr | Molecular ecology Joanna R. Freeland and Heather Kirk ; Stephen Petersen |
| title_full_unstemmed | Molecular ecology Joanna R. Freeland and Heather Kirk ; Stephen Petersen |
| title_short | Molecular ecology |
| title_sort | molecular ecology |
| topic | Molecular ecology Ökologie (DE-588)4043207-5 gnd Molekularbiologie (DE-588)4039983-7 gnd |
| topic_facet | Molecular ecology Ökologie Molekularbiologie |
| url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=021180253&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
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