Guide to research techniques in neuroscience:
Gespeichert in:
| Hauptverfasser: | , |
|---|---|
| Format: | Buch |
| Sprache: | English |
| Veröffentlicht: |
Amsterdam [u.a.]
Elsevier, Acad. Press
2010
|
| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | XXIV, 376 S. Ill., graph. Darst. |
| ISBN: | 9780123748492 |
Internformat
MARC
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| 100 | 1 | |a Carter, Matt |e Verfasser |4 aut | |
| 245 | 1 | 0 | |a Guide to research techniques in neuroscience |c Matt Carter ; Jennifer C. Shieh |
| 246 | 1 | 3 | |a Research techniques in neuroscience |
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| 300 | |a XXIV, 376 S. |b Ill., graph. Darst. | ||
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| 650 | 4 | |a Neurosciences |x Research |x Methodology | |
| 650 | 4 | |a Nervous System Physiological Phenomena | |
| 650 | 4 | |a Diagnostic Imaging |x methods | |
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Datensatz im Suchindex
| _version_ | 1804140835397173248 |
|---|---|
| adam_text | Titel: Guide to research techniques in neuroscience
Autor: Carter, Matt
Jahr: 2010
Contents
Preface xiii
Foreword xvii
Introduction xix
Whole Brain Imaging 1
Structural Brain Imaging Techniques 2
Cerebral Angiography 3
Computerized Tomography (CT) 4
Magnetic Resonance Imaging (MRI) 6
Diffusion Magnetic Resonance Imaging (diffusion MRI) 12
Functional Brain Imaging Techniques 13
Functional Magnetic Resonance Imaging (fMRI) 14
Positron Emission Tomography (PET) 18
Single-Proton Emission Computerized Tomography (SPECT) 19
Electroencephalography (EEG) 19
Magnetoencephalography (MEG) 20
Optical Imaging 21
Functional Imaging Experimental Design and Analysis 23
Planning the Experiment 24
Conducting the Experiment 28
Manipulating Neural Activity During an Experiment 30
Postexperimental Data Analysis 33
Conclusion 36
Suggested Reading and References 36
Animal Behavior 39
Considerations for Choosing and Performing a Behavioral Assay 40
Choosing an Appropriate Model Organism 40
Choosing an Appropriate Behavioral Paradigm 41
Variability in Individuals 43
Using Animal Behavior as a Model for Human Behavior 43
Rodent Behavioral Paradigms 44
Locomotor Activity 44
Motor Coordination and Balance 46
Sensory Function 49
Nociception 51
Spatial Learning and Memory 52
Contents
Nonspatial Learning and Memory 55
Social Behaviors 56
Anxiety 57
Depression 59
Drosophila Behavioral Paradigms 61
Locomotor Behavior 61
Flight 62
Sensory Function 62
Learning and Memory 65
Social Behaviors 65
C. elegans Behavioral Paradigms 66
Locomotor Behavior 66
Sensory Behavior 67
Nonhuman Primate Behavioral Paradigms 67
Conclusion 69
Suggested Reading and References 69
3. Stereotaxic Surgeries and In Vivo Techniques 73
Stereotaxic Surgeries 4
Stereotaxic Surgeries in Rodents 76
Stereotaxic Surgeries in Nonhuman Primates 79
Implants for Long-Term Access to the Brain 81
Sealable Chambers 81
Cannulae 81
Cranial Windows 81
Measuring Neural Activity In Vivo 82
Electrophysiology 82
Fluorescent Activity Indicators 82
Measuring Neurochemistry In Vivo 82
Microdialysis 3
Voltammetry and Amperometry 84
Manipulating the Brain In Vivo °
Physical Manipulation 87
Pharmacological Manipulation 87
Electrical Manipulation 88
Genetic Manipulation
Conclusion
Suggested Reading and References
89
89
4. Electrophysiology 91
A Brief Review of the Electrical Properties of Neurons 92
The Electrophysiology Rig 95
Types of Electrophysiology Recordings
Extracellular Recording 1^
Intracellular Recording 1
Patch Clamp Techniques
Contents vii
Electrophysiology Tissue Preparations 110
In Vitro Recordings 111
In Vivo Recordings 115
Methods of Manipulating Neurons During
Electrophysiology Experiments 116
Conclusion 117
Suggested Reading and References 117
5. Microscopy 119
Essential Principles of Microscopy 120
Fundamental Parameters in Microscopy 120
The Design of a Compound Microscope 123
The Design of a Stereomicroscope 127
Light Microscopy 129
Fluorescence Microscopy 129
Epifluorescent Microscopy 1 32
Confocal Microscopy 132
Two-Photon Microscopy 133
Total Internal Reflection Fluorescence (TIRF) Microscopy 134
Electron Microscopy 135
Transmission Electron Microscopy (TEM) 136
Scanning Electron Microscopy (SEM) 136
Electron Tomography (ET) 137
Preparing and Interpreting Microscopy Data 141
Image Processing 141
Interpreting Images 142
Conclusion 144
Suggested Reading and References 144
6. Visualizing Nervous System Structure 147
Tissue Preparation 148
Fixation 148
Embedding 149
Sectioning 149
Visualizing Morphology 151
Cell Body Stains 152
Fiber Stains 153
Golgi Stain 1 53
Intracellular and Juxtacellular Labeling 154
Fluorescent Labels 156
Chromogenic/Colorimetric Labels 156
Radioactive Labels 157
Gold Labels 157
Visualizing Gene and Protein Expression 157
In Situ Hybridization 1 58
vjii Contents
Immunohistochemistry 160
Enzymatic Histochemistry 161
Reporter Genes 161
Visualizing Circuitry 164
Anterograde and Retrograde Tracers 164
Transsynaptic Labeling 166
Conclusion 167
Suggested Reading and References 167
7. Visualizing Nervous System Function 169
Static Markers of Activity 170
Assaying Neural Activity in Fixed Tissue 171
Assaying Cellular Function in Fixed Tissue 172
Visualizing Neural Activity 173
Imaging Voltage 173
Imaging Calcium 175
Imaging Synaptic Transmission 178
Optically Manipulating Neural Activity 178
Stimulation through Uncaging of Molecules 179
Light-Activated Channels 179
Visualizing Protein Function 182
Time-Lapse Imaging with Reporter Genes 182
Fluorescence Resonance Energy Transfer (FRET) 182
Bimolecular Fluorescence Complementation (BiFC) 184
Fluorescence Recovery after Photobleaching (FRAP) 184
Photoactivation and Photoconversion 184
Optically Manipulating Protein Function 185
Photoactivation/Photo-uncaging 185
Photoinactivation 185
Conclusion 187
Suggested Reading and References 188
8. Identifying Genes and Proteins of Interest 191
A Brief Review of Genes and Proteins 192
The Central Dogma of Molecular Biology 192
DNA 193
Transcription 195
Translation 195
Genetic Screens 197
Forward Genetic Screen 198
Reverse Genetic Screen 202
In Silico Screens 202
BLAST 203
Ensembl 203
Contents
Molecular Screens 203
cDNA Microarray Screen 203
RNAi Screen 205
Conclusion 205
Suggested Reading and References 205
9. Molecular Cloning and Recombinant
DNA Technology 207
Isolating DNA Fragments 208
Restriction Enzymes 208
Polymerase Chain Reaction (PCR) 210
Cloning DNA 215
Vectors 216
Ligation 217
Transformation 219
Purifying DNA 219
Isolation and Characterization of DNA Fragments Using
Gel Electrophoresis 220
Purifying DNA from Host Cells 221
Identifying DNA 223
DNA Sequencing 223
Nucleic Acid Hybridization Techniques 224
Conclusion 226
Suggested Reading and References 227
10. Gene Delivery Strategies 229
Physical Gene Delivery 230
Microinjection 230
Electroporation 231
Biolistics 234
Chemical Gene Delivery 235
Calcium Phosphate Transfection 235
Lipid Transfection 236
Viral Gene Delivery 237
Adenovirus 239
Adeno-Associated Virus (AAV) 240
Lentivirus 240
Herpes Simplex Virus (HSV) 240
Conclusion 240
Suggested Reading and References 241
11. Making and Using Transgenic Organisms 243
Transgenes 244
Reporter Genes 244
Genes Used to Ablate Neurons 246
Contents
Genes Used to Measure Neural Activity 247
Genes Used to Manipulate Neural Activity 247
Genes Used to Disrupt Endogenous Gene Function 248
Overexpression or Misexpression of Endogenous Genes 248
The Transgenic Construct 248
Binary Transgenic Systems 251
The Gal4/UAS System 252
The Cre/Lox System 253
The Flp/Frt System 254
The Tet-off/Tet-on System 254
Making Transgenic Organisms 255
Making Transgenic Mice 255
Making Transgenic Flies 257
Making Transgenic Worms 258
Making Other Transgenic Organisms 260
Conclusion 261
Suggested Reading and References 261
12. Manipulating Endogenous Genes 263
Genetic Targeting 264
Knockout 265
Knockin 272
Conditional Knockout 273
Disrupting Gene Products 275
RNA Interference (RNAi) 275
Morpholinos 277
Dominant Negatives 277
Conclusion 278
Suggested Reading and References 279
13. Cell Culture Techniques 281
Cell Culture Equipment and Reagents 282
Equipment 282
Culture Media 284
Immortalized Cell Lines 284
Primary Cell and Tissue Culture 287
Dissociated Cell Cultures 288
Slice Cultures 289
Explant Cultures 289
Stem Cell Cultures 290
Embryonic Stem Cells 290
Neural Stem Cells 291
Induced Pluripotent Stem Cells 292
Manipulating Cells in Culture 293
Transfection 293
Coculture Systems 293
Contents xi
Pharmacology 294
Antibody Interference 294
Conclusion 295
Suggested Reading and References 295
14. Biochemical Assays and Intracellular Signaling 297
Introduction to Signal Transduction and Intracellular Signaling 298
Fundamental Tools for Studying Proteins 300
Making and Using Antibodies 300
Purifying Proteins 302
Immunoprecipitation (IP) 304
Investigating Protein Expression 306
Western Blot (WB) 306
Enzyme-Linked Immunosorbent Assay (ELISA) 308
Radioimmunoassay (RIA) 310
Immunohistochemistry (IHC) 312
Immunoelectron Microscopy (IEM) 312
Reporter Proteins 312
Investigating Protein-Protein Interactions 313
Coimmunoprecipitation (Co-IP) 313
Protein Affinity Chromatography 313
Yeast Two-Hybrid Assay 314
Investigating Posttranslational Modifications 317
PTM-Specific Assays 31 7
PTM-Specific Antibodies 320
Investigating Protein-DNA Interactions 321
Electrophoretic Mobility Shift Assay (EMSA) 323
Chromatin Immunoprecipitation (ChIP) 325
Luciferase Assay 327
Conclusion 328
Suggested Reading and References 328
Glossary 331
Index 363
|
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| spelling | Carter, Matt Verfasser aut Guide to research techniques in neuroscience Matt Carter ; Jennifer C. Shieh Research techniques in neuroscience Amsterdam [u.a.] Elsevier, Acad. Press 2010 XXIV, 376 S. Ill., graph. Darst. txt rdacontent n rdamedia nc rdacarrier Neurosciences Research Methodology Nervous System Physiological Phenomena Diagnostic Imaging methods Laboratory Techniques and Procedures Neurologie (DE-588)4041888-1 gnd rswk-swf Neurowissenschaften (DE-588)7555119-6 gnd rswk-swf Radiologische Diagnostik (DE-588)4048214-5 gnd rswk-swf Untersuchungsmethode (DE-588)4324907-3 gnd rswk-swf Methode (DE-588)4038971-6 gnd rswk-swf Neurowissenschaften (DE-588)7555119-6 s Methode (DE-588)4038971-6 s DE-604 Neurologie (DE-588)4041888-1 s Radiologische Diagnostik (DE-588)4048214-5 s Untersuchungsmethode (DE-588)4324907-3 s 1\p DE-604 Shieh, Jennifer C. 1981- Verfasser (DE-588)140188401 aut HBZ Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=018715851&sequence=000004&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis 1\p cgwrk 20201028 DE-101 https://d-nb.info/provenance/plan#cgwrk |
| spellingShingle | Carter, Matt Shieh, Jennifer C. 1981- Guide to research techniques in neuroscience Neurosciences Research Methodology Nervous System Physiological Phenomena Diagnostic Imaging methods Laboratory Techniques and Procedures Neurologie (DE-588)4041888-1 gnd Neurowissenschaften (DE-588)7555119-6 gnd Radiologische Diagnostik (DE-588)4048214-5 gnd Untersuchungsmethode (DE-588)4324907-3 gnd Methode (DE-588)4038971-6 gnd |
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| title | Guide to research techniques in neuroscience |
| title_alt | Research techniques in neuroscience |
| title_auth | Guide to research techniques in neuroscience |
| title_exact_search | Guide to research techniques in neuroscience |
| title_full | Guide to research techniques in neuroscience Matt Carter ; Jennifer C. Shieh |
| title_fullStr | Guide to research techniques in neuroscience Matt Carter ; Jennifer C. Shieh |
| title_full_unstemmed | Guide to research techniques in neuroscience Matt Carter ; Jennifer C. Shieh |
| title_short | Guide to research techniques in neuroscience |
| title_sort | guide to research techniques in neuroscience |
| topic | Neurosciences Research Methodology Nervous System Physiological Phenomena Diagnostic Imaging methods Laboratory Techniques and Procedures Neurologie (DE-588)4041888-1 gnd Neurowissenschaften (DE-588)7555119-6 gnd Radiologische Diagnostik (DE-588)4048214-5 gnd Untersuchungsmethode (DE-588)4324907-3 gnd Methode (DE-588)4038971-6 gnd |
| topic_facet | Neurosciences Research Methodology Nervous System Physiological Phenomena Diagnostic Imaging methods Laboratory Techniques and Procedures Neurologie Neurowissenschaften Radiologische Diagnostik Untersuchungsmethode Methode |
| url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=018715851&sequence=000004&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
| work_keys_str_mv | AT cartermatt guidetoresearchtechniquesinneuroscience AT shiehjenniferc guidetoresearchtechniquesinneuroscience AT cartermatt researchtechniquesinneuroscience AT shiehjenniferc researchtechniquesinneuroscience |