Plant stress biology: from genomics to systems biology
Gespeichert in:
| Weitere Verfasser: | |
|---|---|
| Format: | Buch |
| Sprache: | English |
| Veröffentlicht: |
Weinheim
Wiley-VCH
2009
|
| Schlagworte: | |
| Online-Zugang: | Inhaltstext Klappentext Inhaltsverzeichnis |
| Beschreibung: | XVI, 257 S. 30 schw.-w. Ill., 6 farb. Ill. 240 mm x 170 mm |
| ISBN: | 9783527322909 |
Internformat
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Datensatz im Suchindex
| _version_ | 1805093025657913344 |
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| adam_text |
Plant Stress
Biology is the first book to present a comprehensive and advanced
discussion on the latest insights into plant stress biology. Starting with gene¬
ral aspects of biotic as well as abiotic stresses, this handbook and ready refe¬
rence moves on to focus on topics of stress hormones, technical approaches
such as proteomics, transcriptomics and genomics, and their integration into
systemic modeling.
This book is a valuable resource for researchers as well as professionals not
just in plant sciences but also in cell and molecular biology as well as bio¬
technology.
From the contents:
■
From Model Systems to Crop Improvement
■
Stress Responses and Newly Involved Plant Hormones
■
From Transcriptomics and Proteomics to Signaling Networks
Heribert Hirt
is Director of URGV Plant Genomics, a research
institute in the south of Paris, France. Having obtained his
academic degrees from the universities of Cape Town, South
Africa, and Vienna, Austria, he spent post-doctoral periods at
the universities of Oxford, UK, and
Wageningen,
The Nether¬
lands, before taking up a professor position in Vienna.
Professor
Hirt
has authored over ioo scientific peer-reviewed
research publications and reviews and has edited a number of
scientific books. He has received numerous scientific awards
and is co-editor of several international journals.
Titel: Plant stress biology
Autor: Hirt, Heribert
Jahr: 2009
Contents
Preface XI
List of Contributors XIII
Part I From Model Systems to Crop Improvement 1
1 General Stress Response of a Model Bacterium 3
Abram Aertsen, Philipp De Spiegeleer, Laurence Van Melderen, and
Chris W. Michiels
1.1 Introduction 3
1.2 General Stress Response 3
1.2.1 The crs Regulatory Network 4
1.2.2 E. coli Osmotic Shock Resistance 5
1.2.3 E. coli Acid Resistance: An Example of a Differentially
Controlled rs Module 6
1.3 Regulation of as 7
1.3.1 Transcriptional Regulation of rs 7
1.3.2 Translational Regulation of crs 8
1.3.3 Post-Translational Regulation of as 9
1.3.4 Competition for RNAP and Promoters 10
1.4 Conclusions 11
2 Moss as a Model System for Plant Stress Responses 17
Andrew C. Cuming
2.1 Introduction 17
2.2 Model Systems 19
2.3 Physcomitrella as a Model System 22
2.4 Water Stress and Abscisic Acid 24
2.5 T. ruralis: A Model for Poikilohydry 28
2.6 Cold Stress and Abscisic Acid 29
2.7 Future Perspectives 30
VI I Contents
3 Emerging Trends in Functional Cenomics for Stress Tolerance
in Crop Plants 37
Swatismita Ray, Prasant K. Dansana, Avantika Bhaskar, Jitender Gin, Sanjay
Kapoor, Jitendra P. Khurana, and Akhilesh K. Tyagi
3.1 Introduction 37
3.2 Abiotic Stresses Encountered by Plants 38
3.3 Genome-Wide Investigations to Understand Components
Involved in Abiotic Stress Responses 39
3.3.1 Transcriptome Analysis 39
3.3.2 Role of MicroRNAs in Stress 41
3.3.3 Analysis of Abiotic Stress-Responsive Genes using Proteomic
Approaches 42
3.4 Quantitative Trait Loci for Abiotic Stress Tolerance 44
3.5 Networking the Stress Response Gene Function 44
3.5.1 Sensing Systems 44
3.5.2 Calcium and Calcium-Sensing Proteins 45
3.5.3 MAPK Proteins: At the Crossroads of Signaling
Pathways 47
3.5.4 Other Pathways 48
3.5.5 Transcription Factors at the Junction 49
3.6 Functional Characterization of Stress Response Genes by the
Transgenic Approach 53
3.7 Conclusions 52
Part II Stress Responses and Newly Involved Plant Hormones 65
4 Stress Physiology of Higher Plants: Cross-Talk between
Abiotic and Biotic Stress Signaling 67
Miki Fujita, Yasunari Fujita, Fuminori Takahashi, Kazuko
Yamaguchi-Shinozaki, and Kazuo Shinozaki
4.1 Introduction 67
4.2 Cuticles and Stomata 68
4.3 Hormone Signaling Governs Biotic and Abiotic Stress
Responses 71
4.4 Roles of ROS at Points of Convergence between Biotic
and Abiotic Stress Response Pathways 73
4.5 Transcription Factors Involved in the Cross-talk between
Abiotic and Biotic Stress Signaling 74
4.6 Mitogen-Activated Protein Kinase Cascade 76
4.7 Effects of Humidity and Temperature on Biotic Stress
Responses 78
4.8 Conclusions 79
Contents I VII
5 Jasmonates in Stress, Growth, and Development 91
Claus Wasternack
5.1 Introduction 91
5.2 JA Biosynthesis 92
5.3 JA Metabolism 95
5.4 Bound OPDA - Arabidopsides 97
5.5 Mutants of JA Biosynthesis and Signaling 98
5.6 COIl-JAZ-JA-Ile-Mediated JA Signaling 101
5.7 Transcription Factors Involved in JA Signaling 104
5.8 Jasmonates and Oxylipins in Development 106
5.9 Conclusions 108
6 Brassinosteroids Confer Stress Tolerance 119
Uday K. DM and Priti Krishna
6.1 Introduction 119
6.2 BR Signaling 120
6.3 BR Increases Stress Tolerance 121
6.3.1 Temperature Stress 121
6.3.2 Salt Stress 123
6.3.3 Drought Stress 123
6.3.4 Pathogen Attack 124
6.3.5 Other Stresses 126
6.4 Anticancer and Antiviral Effects 126
6.5 Genetic Evidence for a Role of BR in Plant Stress
Responses 126
6.6 BR-Independent Role of BAK1 in Innate Immunity and
Cell Death 127
6.7 Systematic Study to Dissect the Role of BR in Abiotic
Stress Tolerance 130
6.8 Future Directions 131
7 Cold, Salinity, and Drought Stress 137
Narendra Tuteja
7.1 Introduction 137
7.2 Abiotic Stress Response and Stress-Induced Genes 139
7.3 Cold Stress 141
7.3.1 Effect of Low-Temperature Stress on Plant Physiology 141
7.3.2 Cold Acclimation 142
7.3.3 Function of Cold-Regulated Genes in Freezing
Tolerance 142
7.3.4 Calcium Signaling in Cold Stress Response 144
7.4 Salinity Stress 144
7.4.1 Negative Impact of Salinity Stress 146
VIII I Contents
7.4.2 Calcium Signaling and SOS Pathways in Relation to Salinity
Stress 147
7.4.3 ABA and Transcription Factors in Salinity Stress
Tolerance 148
7.4.4 Water Stress due to Salinity 149
7.4.5 Proline and GB in Salinity Stress 149
7.4.6 ROS in Salinity Stress 150
7.5 Drought Stress 151
7.5.1 Effect of Drought on Stomata and Photosynthesis 152
7.5.2 Sugars and other Osmolytes in Response to Drought
Stress 153
7.5.3 Phospholipid Signaling in Drought Stress 154
7.6 Conclusions and Future Prospects 154
8 Heavy Metal Stress in Plants 161
Ann Cuypers, Karen Smeets, andjaco Vangronsveld
8.1 Introduction 161
8.2 Uptake and Distribution of Metals in Plants 162
8.3 Metal Stress Affects the Plant's Physiology 163
8.4 Unraveling the Cellular Responses of Metal Stress 365
8.4.1 Metal-Induced Oxidative Stress 166
8.5 Signaling Under Metal Stress 167
8.6 Conclusions 170
9 Systematic Analysis of Superoxide-Dependent Signaling
in Plant Cells: Usefulness and Specificity of Methyl
Viologen Application 179
Simone Jacob and Karl-Josef Dietz
9.1 Reactive Oxygen Species and Antioxidant Defense 179
9.1.1 Reactive Oxygen Species - Generation and Biological
Relevance 179
9.1.2 Detoxification of ROS - Antioxidative Network in
Plants 181
9.2 Methyl Viologen: From Redox Indicator and Herbicide to
Application as Effector in Oxidative Stress Investigation 183
9.2.1 General Considerations to Methyl Viologen as Herbicide
and Toxin 183
9.2.2 Mechanism of Methyl Viologen Toxicity in Plants and
Animals 185
9.2.3 Lipid Peroxidation as a Consequence of Oxidative
Stress upon Methyl Viologen Application 286
9.2.4 Requirement of the Antioxidative Network upon
Methyl Viologen Application 186
9.3 Gaining Insights into Superoxide Anion-Mediated Signaling
in Plants - Goals and Limitations of Methyl Viologen
Application 187
Contents I IX
9.3.1 Superoxide Anion and Hydrogen Peroxide Signaling:
A Problem of Differentiation? 187
9.3.2 Transgenic Plants as a Powerful Tool towards Understanding
the Participation of Superoxide Anion in Signal Transduction
Processes 187
9.3.3 Towards Understanding of Superoxide Anion Signaling
in Plants 190
9.4 Conclusions 191
Part III From Transcriptomics and Proteomics to Signaling Networks 197
10 I nsights into the Arabidopsis Abiotic Stress Response from the
AtCenExpress Expression Profile Dataset 199
Dierk Wanke, Kenneth W. Berendzen, Joachim Kilian, and Klaus Harter
10.1 Introduction 199
10.2 The AtGenExpress Abiotic Stress Experiment 200
10.3 General Findings 201
10.4 The Nine Stresses 204
10.4.1 UV-B Light Stress 204
10.4.2 Osmotic Stress 206
10.4.3 Salt Stress 208
10.4.4 Cold Stress 209
10.4.5 Drought Stress 210
10.4.6 Heat Stress 211
10.4.7 Wounding Stress 211
10.4.8 Genotoxic Stress 212
10.4.9 Oxidative Stress 213
10.5 Signal Integration 213
10.6 Novel Approaches and Future Developments 221
10.7 Conclusions 221
11 Integrative Approaches to Elucidate and Analyze Protein
Interaction and Signaling Networks 227
Sergio de la Fuente van Bentem, Alberto de la Fuente, and Heribert Hirt
11.1 Introduction 227
11.2 Protein Networks 228
11.2.1 Introduction to Protein Networks 228
11.2.2 CNA 229
11.3 PINs 230
11.3.1 Toward Global Arabidopsis PINs 231
11.3.2 An Arabidopsis PIN of Calmodulin- and
Calmodulin-Like-Binding Proteins 240
11.4 PSNs 240
11.4.1 Introduction to PSNs 240
11.4.2 From Perturbations and Responses to PSNs 241
X Contents
11.4.3 High-Throughput Approaches to Create Perturbations and to
Measure Responses 242
11.4.4 A NetworKIN Approach to Construct Plant Phosphorylation
Networks 243
11.5 Future Outlook on Plant Networks 245
Index 249 |
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| discipline | Biologie |
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| spelling | Plant stress biology from genomics to systems biology ed. by Heribert Hirt Weinheim Wiley-VCH 2009 XVI, 257 S. 30 schw.-w. Ill., 6 farb. Ill. 240 mm x 170 mm txt rdacontent n rdamedia nc rdacarrier Pflanzen - Stress - Aufsatzsammlung Stress (DE-588)4058047-7 gnd rswk-swf Pflanzen (DE-588)4045539-7 gnd rswk-swf (DE-588)4143413-4 Aufsatzsammlung gnd-content Pflanzen (DE-588)4045539-7 s Stress (DE-588)4058047-7 s DE-604 Hirt, Heribert 1956- (DE-588)121395707 edt text/html http://deposit.dnb.de/cgi-bin/dokserv?id=3294464&prov=M&dok_var=1&dok_ext=htm Inhaltstext Digitalisierung UB Bayreuth application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=018616164&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Klappentext HBZ Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=018616164&sequence=000006&line_number=0002&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
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| title | Plant stress biology from genomics to systems biology |
| title_auth | Plant stress biology from genomics to systems biology |
| title_exact_search | Plant stress biology from genomics to systems biology |
| title_full | Plant stress biology from genomics to systems biology ed. by Heribert Hirt |
| title_fullStr | Plant stress biology from genomics to systems biology ed. by Heribert Hirt |
| title_full_unstemmed | Plant stress biology from genomics to systems biology ed. by Heribert Hirt |
| title_short | Plant stress biology |
| title_sort | plant stress biology from genomics to systems biology |
| title_sub | from genomics to systems biology |
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| topic_facet | Pflanzen - Stress - Aufsatzsammlung Stress Pflanzen Aufsatzsammlung |
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