Microbial inhabitants of humans: their ecology and role in health and disease
Gespeichert in:
| 1. Verfasser: | |
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| Format: | Buch |
| Sprache: | English |
| Veröffentlicht: |
Cambridge [u.a.]
Cambridge Univ. Press
2005
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| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis Inhaltsverzeichnis |
| Beschreibung: | XVIII, 455 S. Ill., graph. Darst. |
| ISBN: | 9780521841580 0521841585 |
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| 100 | 1 | |a Wilson, Michael |e Verfasser |4 aut | |
| 245 | 1 | 0 | |a Microbial inhabitants of humans |b their ecology and role in health and disease |c Michael Wilson |
| 264 | 1 | |a Cambridge [u.a.] |b Cambridge Univ. Press |c 2005 | |
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Datensatz im Suchindex
| _version_ | 1804145095888338944 |
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| adam_text | Contents
Preface xvii
Abbreviations used for microbial genera xix
Chapter I I An introduction to the human-microbe symbiosis page l
1.1 Overview of the distribution and nature of the indigenous microbiota of
humans 2
1.1.1 Difficulties associated with determining microbial community
composition 4
1.1.2 Structural aspects of residential microbial communities 6
1.1.3 Communication between members of microbial communities 11
1.2 Environmental determinants affecting the distribution and composition
of the indigenous microbiota 12
1.2.1 Nutritional determinants 13
1.2.2 Physicochemical determinants 19
1.2.3 Mechanical determinants 23
1.2.4 Biological determinants 24
1.3 Host characteristics affecting the indigenous microbiota 26
1.3.1 Effect of age 26
1.3.2 Effect of host genotype 28
1.3.3 Effect of gender 29
1.4 Analytical methods used in characterising the indigenous microbiota 29
1.4.1 Microscopy 29
1.4.2 Culture 31
1.4.3 Molecular approaches 33
1.4.4 Metabolic approaches 34
1.5 The epithelium-site of host-microbe interactions 35
1.5.1 Structure of epithelia 36
1.5.2 The epithelium as an excluder of microbes 38
1.5.3 Mucus and mucins 39
1.5.4 Innate and acquired immune responses at the mucosal surface 43
1.6 Further reading 47
Chapter 2 I The skin and its indigenous microbiota 51
2.1 Anatomy and physiology of human skin 51
2.2 Antimicrobial defence mechanisms of the skin 55
2.3 Environmental determinants at different regions of the skin 58
2.4 The indigenous microbiota of the skin 65
2.4.1 Main characteristics of key members of the cutaneous
microbiota 65
2.4.1.1 Corynebacterium spp. 65
2.4.1.2 Propionibacterium spp. 68
2.4.1.3 Staphylococcus spp. 69
2.4.1.4 Micrococcus spp. 73
2.4.1.5 Malassezia spp. 73
viii I CONTENTS
2.4.1.6 Acinetobacter spp. 75
2.4.1.7 Brevibacterium spp. 75
2.4.1.8 Dermabacterhominis 76
2.4.2 Acquisition of the cutaneous microbiota 76
2.4.3 Community composition at different sites 78
2.4.3.1 Scalp 82
2.4.3.2 Forehead 82
2.4.3.3 Toe interspace 83
2.4.3.4 Perineum 83
2.4.3.5 Axillae 84
2.4.3.6 Sole of the foot 86
2.4.3.7 Forearm and leg 87
2.4.3.8 Hands 87
2.4.3.9 Outer ear 88
2.4.4 Interactions among members of the cutaneous microbiota 89
2.4.5 Dissemination of organisms from the skin 92
2.4.6 Effect of antibiotics and other interventions on the indigenous
microbiota of the skin 93
2.4.6.1 Antibiotics 93
2.4.6.2 Occlusion 95
2.4.6.3 Skin cleansing 96
2.5 Diseases caused by members of the cutaneous microbiota 98
2.5.1 Acne 98
2.5.2 Intravascular catheter-associated infections 99
2.5.3 Infections associated with implanted prosthetic devices 100
2.5.4 Wound infections 101
2.5.5 Urinary tract infections 101
2.5.6 Infective endocarditis 102
2.5.7 Diseases caused by Malassezia spp. 102
2.5.8 Erythrasma 103
2.5.9 Odour 103
2.5.10 Pitted keratolysis 104
2.5.11 Trichomycosis 104
2.6 Further reading 104
Chapter 3 I The eye and its indigenous microbiota 107
3.1 Anatomy and physiology of the eye 107
3.2 Antimicrobial defence mechanisms of the eye 108
3.3 Environmental determinants at different regions of the eye 113
3.4 The indigenous microbiota of the eye 116
3.4.1 Main characteristics of key members of the ocular microbiota 116
3.4.2 Acquisition of the ocular microbiota 116
3.4.3 Composition of the indigenous microbiota of the eye 118
3.4.4 Interactions among members of the ocular microbiota 119
3.4.5 Dissemination of organisms from the eye 120
3.4.6 Effect of antibiotics and other interventions on the ocular
microbiota 120
3.4.6.1 Antibiotic administration 120
3.4.6.2 Contact lens wear 121
CONTENTS I ix
3.5 Diseases caused by members of the ocular microbiota 121
3.5.1 Conjunctivitis 122
3.5.2 Blepharitis 122
3.5.3 Keratitis 122
3.5.4 Endophthalmitis 124
3.5.5 Orbital cellulitis 125
3.5.6 Dacryocystitis 125
3.6 Further reading 125
Chapter 4 The respiratory system and its indigenous microbiota 128
4.1 Anatomy and physiology of the respiratory tract 128
4.1.1 Nose 128
4.1.2 Pharynx 130
4.1.3 Larynx 131
4.1.4 Trachea 131
4.1.5 Bronchi and bronchioles 131
4.1.6 Alveolus 132
4.2 Antimicrobial defence mechanisms of the respiratory tract 133
4.2.1 Nasal cavity 136
4.2.2 Conducting portion of respiratory tract other than the nasal
cavity 137
4.2.3 Respiratory portion 139
4.3 Environmental determinants at different regions of the respiratory
tract 140
4.3.1 Composition of nasal fluid 141
4.3.2 Composition of airway surface liquid 142
4.3.3 Composition of alveolar lining fluid 143
4.3.4 Contribution of microbial residents of the respiratory tract to
nutrient availability 143
4.4 Indigenous microbiota of the respiratory tract 143
4.4.1 Main characteristics of key members of the respiratory
microbiota 143
4.4.1.1 Neisseria spp. 144
4.4.1.2 Haemophtius spp. 146
4.4.1.3 Streptococcus spp. 146
4.4.1.3.1 Streptococcus pyogenes 147
4.4.1.3.2 Streptococcus pneumoniae 149
4.4.1.3.3 Viridans group streptococci 150
4.4.1 A Moraxella catarrhalis 150
4.4.1.5 Staphylococcus aureus 150
4.4.1.6 Mollicutes 151
4.4.2 Acquisition of the respiratory microbiota 152
4.4.3 Community composition at different sites within the respiratory
tract 157
4.4.3.1 External nares 157
4.4.3.2 Nasal cavity 159
4.4.3.3 Nasopharynx 160
4.4.3.4 Oropharynx 164
4.4.3.5 Lower respiratory tract 166
x I CONTENTS
4.4.4 Interactions among members of the respiratory microbiota 167
4.4.5 Dissemination of organisms from the respiratory tract 168
4.4.6 Effects of antibiotics and other interventions on the respiratory
microbiota 169
4.4.6.1 Antibiotics 169
4.4.6.2 Vaccination 170
4.4.6.3 Intubation 170
4.4.6.4 Radiation therapy 171
4.5 Diseases caused by members of the respiratory microbiota 171
4.5.1 Meningitis 171
4.5.2 Pneumonia 172
4.5.3 Sinusitis 173
4.5.4 Otitis media 173
4.5.5 Epiglottitis 174
4.5.6 Diseases due to Staph. aureus 174
4.5.7 Diseases due to Strep, pyogenes 175
4.6 Further reading 178
Chapter 5 I The urinary system and its indigenous microbiota 182
5.1 The urinary system of females 182
5.1.1 Anatomy and physiology 182
5.1.2 Antimicrobial defence mechanisms of the urinary system 182
5.1.3 Environmental determinants within the urethra 185
5.1.4 The indigenous microbiota of the female urethra 186
5.1.4.1 Main characteristics of key members of the urethral
microbiota 186
5.1.4.2 Acquisition of the urethral microbiota 187
5.1.4.3 Community composition within the female urethra 188
5.1.4.4 Dispersal of organisms from the urethra 190
5.1.4.5 Effect of antibiotics and other interventions on the
urethral microbiota 190
5.1.4.5.1 Antibiotics 190
5.1.4.5.2 Catheterisation 191
5.1.5 Diseases caused by members of the urethral microbiota of
females 192
5.1.5.1 Infections due to Gram-positive anaerobic cocci 192
5.1.5.2 Urethral syndrome 192
5.2 The urinary system of males 192
5.2.1 Anatomy and physiology 192
5.2.2 Antimicrobial defence mechanisms 194
5.2.3 Environmental determinants within the male urethra 195
5.2.4 The indigenous microbiota of the male urethra 196
5.2.4.1 Main characteristics of key members of the microbiota 196
5.2.4.2 Acquisition of the microbiota of the male urethra 197
5.2.4.3 Community composition of the microbiota of the male
urethra 197
5.2.4.4 Dispersal of organisms from the urethra 201
5.2.4.5 Effect of antibiotics and other interventions on the
urethral microbiota 201
CONTENTS I xi
5.2.4.5.1 Antibiotic use 201
5.2.4.5.2 Catheterisation 201
5.2.5 Diseases caused by members of the urethral microbiota
of males 202
5.2.5.1 Urethritis 202
5.2.5.2 Prostatitis 202
5.2.5.3 Balanitis 203
5.3 Further reading 203
Chapter 6 I The reproductive system and its indigenous microbiota 206
6.1 Anatomy and physiology of the female reproductive system 206
6.2 Antimicrobial defence mechanisms of the female reproductive
system 209
6.2.1 Innate defence mechanisms of the female reproductive
system 209
6.2.2 Acquired immune defence mechanisms of the female
reproductive system 212
6.3 Environmental determinants at different regions of the reproductive
system 213
6.3.1 Vagina 213
6.3.2 Cervix 216
6.3.3 Vulva 217
6.3.4 Contribution of microbial residents of the reproductive system
to nutrient availability 218
6.4 The indigenous microbiota of the female reproductive system 219
6.4.1 Main characteristics of key members of the microbiota 219
6.4.1.1 Lactobacillus spp. 219
6.4.1.2 Ureaplasma urealyticum 219
6.4.1.3 Gardnerella vaginalis 221
6.4.1.4 Candida albicans 221
6.4.1.5 Streptococcus agalactiae (Group B streptococcus) 222
6.4.2 Acquisition of the microbiota of the female reproductive
system 223
6.4.3 Community composition at different sites within the female
reproductive system 223
6.4.3.1 Vagina 223
6.4.3.1.1 Microbiota of post-menarchal/pre-menopausal
women 224
6.4.3.1.2 Microbiota of premenarchal girls 231
6.4.3.1.3 Microbiota of post-menopausal women 232
6.4.3.2 Cervix 234
6.4.3.3 Vulva 234
6.4.4 Dissemination of organisms from the female reproductive
system 238
6.4.5 Effect of antibiotics and other interventions and events
on the indigenous microbiota of the female reproductive system 238
6.4.5.1 Antibiotics 238
6.4.5.2 Contraceptives 240
6.4.5.3 Sexual intercourse 240
ii I CONTENTS
6.4.5.4 Pregnancy 241
6.4.5.5 Douching 241
6.5 Diseases caused by members of the indigenous microbiota of the female
reproductive system 242
6.5.1 Infections of the vagina 242
6.5.1.1 Bacterial vaginosis 243
6.5.1.2 Vaginal candidiasis 244
6.5.2 Infections at sites other than the vagina 246
6.5.2.1 Pelvic inflammatory disease 246
6.5.2.2 Endometritis 246
6.5.2.3 Chorioamnionitis 246
6.5.2.4 Pre-term birth 247
6.5.2.5 Neonatal infections 247
6.5.2.6 Bartholinitis 248
6.6 Further reading 248
Chapter 7 I The gastrointestinal tract and its indigenous microbiota 251
7.1 Anatomy and physiology of the gastrointestinal tract 251
7.2 Antimicrobial defence mechanisms of the gastrointestinal tract 258
7.2.1 Innate defence systems 258
7.2.2 Acquired immune defence system 260
7.3 Environmental determinants within different regions of the
gastrointestinal tract 261
7.3.1 Oesophagus 262
7.3.2 Stomach 262
7.3.3 Small intestine 263
7.3.4 Large intestine 264
7.4 The indigenous microbiota of the gastrointestinal tract 267
7.4.1 Main characteristics of key members of the intestinal
microbiota 269
7.4.1.1 Barteroides spp. 269
7.4.1.2 Eubocterium spp. 270
7.4.1.3 Clostridium spp. 271
7.4.1.4 Bifldobacterium spp. 271
7.4.1.5 Enterococcus spp. 272
7.4.1.6 Helicobacter pylori 273
7.4.1.7 Enterobacteriaceae 275
7.4.1.8 Ruminococcus spp. 277
7.4.1.9 Methanogenic bacteria 277
7.4.1.10 Desulphovibrio spp. 277
7.4.2 Acquisition of the intestinal microbiota 278
7.4.3 Community composition at different sites 282
7.4.3.1 Oesophagus 282
7.4.3.2 Stomach 283
7.4.3.3 Small intestine 284
7.4.3.4 Large intestine 287
7.4.4 Microbial interactions in the gastrointestinal tract 294
7.4.4.1 Positive interactions 295
7.4.4.2 Negative interactions 296
CONTENTS I xiii
7.4.5 Dissemination of organisms from the gastrointestinal tract 297
7.4.6 Effect of antibiotics and other interventions on the microbiotas
of the gastrointestinal tract 298
7.4.6.1 Antibiotics 298
7.4.6.2 Artificial nutrition 300
7.4.6.3 Probiotics and prebiotics 300
7.5 Diseases caused by members of the intestinal microbiota 300
7.5.1 Diseases due to Helicobacter pylori 300
7.5.2 Irritable bowel syndrome 301
7.5.3 Inflammatory bowel disease 302
7.5.4 Diseases due to Qostridium spp. 302
7.5.5 Intra-abdominal infections 303
7.5.6 Diseases due to Enterobacteriaceae 303
7.5.7 Urinary tract infections 303
7.5.7.1 Urinary tract infections in females 303
7.5.7.2 Urinary tract infections in males 310
7.5.8 Colorectal cancer 311
7.5.9 Systemic infections resulting from bacterial translocation 312
7.5.10 Contaminated small bowel syndrome 312
7.6 Further reading 313
Chapter 8 I The oral cavity and its indigenous microbiota 318
8.1 Anatomy and physiology of the oral cavity 318
8.2 Antimicrobial defence mechanisms of the oral cavity 323
8.3 Environmental determinants at the various sites within the oral cavity 325
8.3.1 Mechanical determinants 325
8.3.2 Nutritional determinants 326
8.3.3 Physicochemical determinants 329
8.4 The indigenous microbiota of the oral cavity 332
8.4.1 Main characteristics of key members of the oral microbiota 333
8.4.1.1 Oral streptococci and other Gram-positive cocci 333
8.4.1.2 Actinomyces spp. 334
8.4.1.3 Veillonella spp. 336
8.4.1.4 Anaerobic Gram-negative bacilli 336
8.4.1.5 Spirochaetes 337
8.4.1.6 Facultatively anaerobic Gram-negative bacilli 338
8.4.2 Acquisition of the oral microbiota 339
8.4.3 Community composition at different sites 340
8.4.3.1 Supragingival plaque 341
8.4.3.2 Gingival crevice 353
8.4.3.3 Tongue 355
8.4.3.4 Other mucosal surfaces 358
8.4.4 Dissemination of organisms from the mouth 359
8.4.5 Effect of antibiotics and other interventions on the oral
microbiota 360
8.4.5.1 Antibiotics 360
8.4.5.2 Mechanical oral-hygiene measures 362
8.4.5.3 Prosthetic devices 362
8.4.5.4 Immunosuppressive chemotherapy 363
:iv I CONTENTS
8.5 Diseases caused by members of the oral microbiota 364
8.5.1 Dental caries 364
8.5.2 Periodontal diseases 365
8.5.2.1 Chronic gingivitis 366
8.5.2.2 Acute necrotising ulcerative gingivitis 366
8.5.2.3 Periodontitis 367
8.5.3 Bacterial endocarditis and other extra-oral infections 369
8.5.4 Denture stomatitis 370
8.5.5 Halitosis 370
8.5.6 Endodontic infections 371
8.5.7 Actinomycosis 371
8.6 Further reading 372
Chapter 9 I Role of the indigenous microbiota in maintaining human
health 375
9.1 Colonisation resistance 375
9.1.1 Exclusion of exogenous microbes 375
9.1.2 Mechanisms involved in colonisation resistance 377
9.1.2.1 Occupation of adhesion sites 377
9.1.2.2 Alteration of the physico-chemical environment 378
9.1.2.3 Production of antagonistic substances 378
9.1.2.4 Utilisation of the available nutrients within a site 379
9.1.3 Disruption of colonisation resistance 380
9.1.3.1 Role of microbial factors 380
9.1.3.2 Role of host factors 382
9.2 Host development 382
9.3 Host nutrition 387
9.3.1 Short-chain fatty acids 388
9.3.2 Vitamins 390
9.4 Detoxification 391
9.5 Further reading 392
Chapter 10 I Manipulation of the indigenous microbiota 395
10.1 Probiotics 395
10.1.1 Probiotics and gastrointestinal health 397
10.1.2 Probiotics and vaginal health 400
10.1.3 Prevention of dental caries using probiotics 401
10.2 Prebiotics 402
10.3 Inhibition of microbial adhesion 403
10.3.1 Inhibition of adhesion using antibodies 404
10.3.2 Inhibition of adhesion using adhesins or adhesin
analogues 405
10.3.3 Inhibition of adhesion using receptors or receptor
analogues 405
10.3.4 Prevention of medical-device-associated infections 406
10.4 Replacement therapy 407
10.4.1 Prevention of infections due to Staphylococcus aureus 408
10.4.2 Prevention ofpharyngeal colonisation and infection 409
10.4.3 Prevention of dental caries 410
CONTENTS I xv
10.4.4 Prevention of otitis media 411
10.4.5 Prevention of urinary tract infections 412
10.4.6 Treatment of infections due to Clostridium difficile 414
10.5 Localised modification of the host environment 414
10.6 Further reading 416
Index 421
|
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| author | Wilson, Michael |
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| building | Verbundindex |
| bvnumber | BV026513565 |
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| ctrlnum | (OCoLC)834584444 (DE-599)BVBBV026513565 |
| dewey-full | 612 |
| dewey-hundreds | 600 - Technology (Applied sciences) |
| dewey-ones | 612 - Human physiology |
| dewey-raw | 612 |
| dewey-search | 612 |
| dewey-sort | 3612 |
| dewey-tens | 610 - Medicine and health |
| discipline | Biologie Medizin |
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| id | DE-604.BV026513565 |
| illustrated | Illustrated |
| indexdate | 2024-07-09T23:14:01Z |
| institution | BVB |
| isbn | 9780521841580 0521841585 |
| language | English |
| lccn | 2004045927 |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-022079894 |
| oclc_num | 834584444 |
| open_access_boolean | |
| owner | DE-M49 DE-BY-TUM |
| owner_facet | DE-M49 DE-BY-TUM |
| physical | XVIII, 455 S. Ill., graph. Darst. |
| publishDate | 2005 |
| publishDateSearch | 2005 |
| publishDateSort | 2005 |
| publisher | Cambridge Univ. Press |
| record_format | marc |
| spelling | Wilson, Michael Verfasser aut Microbial inhabitants of humans their ecology and role in health and disease Michael Wilson Cambridge [u.a.] Cambridge Univ. Press 2005 XVIII, 455 S. Ill., graph. Darst. txt rdacontent n rdamedia nc rdacarrier Body, Human Microbiology Medical microbiology Microbial ecology Ökologie (DE-588)4043207-5 gnd rswk-swf Symbiose (DE-588)4136029-1 gnd rswk-swf Mensch (DE-588)4038639-9 gnd rswk-swf Mikroflora (DE-588)4169816-2 gnd rswk-swf Pathogener Mikroorganismus (DE-588)4044890-3 gnd rswk-swf Mikroorganismus (DE-588)4039226-0 gnd rswk-swf Mensch (DE-588)4038639-9 s Mikroorganismus (DE-588)4039226-0 s Ökologie (DE-588)4043207-5 s Pathogener Mikroorganismus (DE-588)4044890-3 s Symbiose (DE-588)4136029-1 s Mikroflora (DE-588)4169816-2 s b DE-604 http://www.loc.gov/catdir/toc/cam041/2004045927.html Inhaltsverzeichnis HBZ Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=022079894&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Wilson, Michael Microbial inhabitants of humans their ecology and role in health and disease Body, Human Microbiology Medical microbiology Microbial ecology Ökologie (DE-588)4043207-5 gnd Symbiose (DE-588)4136029-1 gnd Mensch (DE-588)4038639-9 gnd Mikroflora (DE-588)4169816-2 gnd Pathogener Mikroorganismus (DE-588)4044890-3 gnd Mikroorganismus (DE-588)4039226-0 gnd |
| subject_GND | (DE-588)4043207-5 (DE-588)4136029-1 (DE-588)4038639-9 (DE-588)4169816-2 (DE-588)4044890-3 (DE-588)4039226-0 |
| title | Microbial inhabitants of humans their ecology and role in health and disease |
| title_auth | Microbial inhabitants of humans their ecology and role in health and disease |
| title_exact_search | Microbial inhabitants of humans their ecology and role in health and disease |
| title_full | Microbial inhabitants of humans their ecology and role in health and disease Michael Wilson |
| title_fullStr | Microbial inhabitants of humans their ecology and role in health and disease Michael Wilson |
| title_full_unstemmed | Microbial inhabitants of humans their ecology and role in health and disease Michael Wilson |
| title_short | Microbial inhabitants of humans |
| title_sort | microbial inhabitants of humans their ecology and role in health and disease |
| title_sub | their ecology and role in health and disease |
| topic | Body, Human Microbiology Medical microbiology Microbial ecology Ökologie (DE-588)4043207-5 gnd Symbiose (DE-588)4136029-1 gnd Mensch (DE-588)4038639-9 gnd Mikroflora (DE-588)4169816-2 gnd Pathogener Mikroorganismus (DE-588)4044890-3 gnd Mikroorganismus (DE-588)4039226-0 gnd |
| topic_facet | Body, Human Microbiology Medical microbiology Microbial ecology Ökologie Symbiose Mensch Mikroflora Pathogener Mikroorganismus Mikroorganismus |
| url | http://www.loc.gov/catdir/toc/cam041/2004045927.html http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=022079894&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
| work_keys_str_mv | AT wilsonmichael microbialinhabitantsofhumanstheirecologyandroleinhealthanddisease |
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Inhaltsverzeichnis