Lecture notes on computational structural biology:
Gespeichert in:
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| Format: | Buch |
| Sprache: | English |
| Veröffentlicht: |
New Jersey, NJ
World Scientific Publ.
2008
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| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | XII, 230 S. graph. Darst. |
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| adam_text | LECTURE NOTES ON COMPUTATIONAL STRUCTURAL BIOLOGY ZHIJUN WU IOWA STATE
UNIVERSITY, USA W WORLD SCIENTIFIC NEW JERSEY * LONDON * SINGAPORE *
BEIJING * SHANGHAI * HONG KONG * TAIPEI * CHENNAI CONTENTS PREFACE VII 1
INTRODUCTION 1 1.1 PROTEIN STRUCTURE 1 1.2 STRUCTURE DETERMINATION 9 1.3
DYNAMICS SIMULATION 13 1.4 THE MYTH OF PROTEIN FOLDING 18 2 X-RAY
CRYSTALLOGRAPHY COMPUTING 27 2.1 THE PHASE PROBLEM 27 2.2 LEAST SQUARES
SOLUTIONS 37 2.3 ENTROPY MAXIMIZATION 46 2.4 INDIRECT METHODS 54 3 NMR
STRUCTURE DETERMINATION 63 3.1 NUCLEAR MAGNETIC RESONANCE 63 3.2
DISTANCE GEOMETRY 73 3.3 DISTANCE-BASED MODELING 81 3.4 STRUCTURAL
ANALYSIS 87 4 POTENTIAL ENERGY MINIMIZATION 99 4.1 POTENTIAL ENERGY
FUNCTION 100 4.2 LOCAL OPTIMIZATION 107 4.3 GLOBAL OPTIMIZATION 111 4.4
ENERGY TRANSFORMATION 116 5 MOLECULAR DYNAMICS SIMULATION 125 5.1
EQUATIONS OF MOTION 125 XII COMPUTATIONAL STRUCTURAL BIOLOGY 5.2
INITIAL-VALUE PROBLEM 129 5.3 BOUNDARY-VALUE PROBLEM 138 5.4 NORMAL MODE
ANALYSIS 145 6 KNOWLEDGE-BASED PROTEIN MODELING 156 6.1
SEQUENCE/STRUCTURAL ALIGNMENT . 156 6.2 FOLD RECOGNITION/INVERSE FOLDING
165 6.3 KNOWLEDGE-BASED STRUCTURAL REFINEMENT 169 6.4 STRUCTURAL
COMPUTING AND BEYOND 173 APPENDIX A DESIGN AND ANALYSIS OF COMPUTER
ALGORITHMS 182 A.I EVALUATION OF ALGORITHMS 183 A.2 INTRACTABILITY 188
A.3 LISTS, ARRAYS, GRAPHS, AND TREES 192 A.4 SORTING, SEARCHING, AND
OPTIMIZATION 195 APPENDIX B NUMERICAL METHODS 202 B.I NUMERICAL LINEAR
ALGEBRA 202 B.2 NUMERICAL OPTIMIZATION 210 B.3 NUMERICAL SOLUTIONS TO
INITIAL-VALUE PROBLEMS 218 B.4 NUMERICAL SOLUTIONS TO BOUNDARY-VALUE
PROBLEMS 222 INDEX 229
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| dewey-hundreds | 500 - Natural sciences and mathematics |
| dewey-ones | 572 - Biochemistry |
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| dewey-search | 572.6 |
| dewey-sort | 3572.6 |
| dewey-tens | 570 - Biology |
| discipline | Biologie |
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| spelling | Wu, Zhijun Verfasser aut Lecture notes on computational structural biology Zhijun Wu New Jersey, NJ World Scientific Publ. 2008 XII, 230 S. graph. Darst. txt rdacontent n rdamedia nc rdacarrier HEBIS Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=020160394&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Wu, Zhijun Lecture notes on computational structural biology |
| title | Lecture notes on computational structural biology |
| title_auth | Lecture notes on computational structural biology |
| title_exact_search | Lecture notes on computational structural biology |
| title_full | Lecture notes on computational structural biology Zhijun Wu |
| title_fullStr | Lecture notes on computational structural biology Zhijun Wu |
| title_full_unstemmed | Lecture notes on computational structural biology Zhijun Wu |
| title_short | Lecture notes on computational structural biology |
| title_sort | lecture notes on computational structural biology |
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