Bioinformatics research and applications: fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings
Gespeichert in:
| Format: | Tagungsbericht Buch |
|---|---|
| Sprache: | English |
| Veröffentlicht: |
Berlin [u.a.]
Springer
2008
|
| Schriftenreihe: | Lecture Notes in Computer Science
4983 : Lecture notes in bioinformatics |
| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | XIX, 510 S. graph. Darst. |
| ISBN: | 9783540794493 3540794492 |
Internformat
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| 020 | |a 3540794492 |c : ca. EUR 68.48 (freier Pr.), ca. sfr 106.50 (freier Pr.) |9 3-540-79449-2 | ||
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| 245 | 1 | 0 | |a Bioinformatics research and applications |b fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings |c Ion Măndoiu ... (eds.) |
| 264 | 1 | |a Berlin [u.a.] |b Springer |c 2008 | |
| 300 | |a XIX, 510 S. |b graph. Darst. | ||
| 336 | |b txt |2 rdacontent | ||
| 337 | |b n |2 rdamedia | ||
| 338 | |b nc |2 rdacarrier | ||
| 490 | 1 | |a Lecture Notes in Computer Science |v 4983 : Lecture notes in bioinformatics | |
| 650 | 4 | |a Bioinformatics |v Congresses | |
| 650 | 4 | |a Computational Biology |x methods |v Congresses | |
| 650 | 4 | |a Computational biology |v Congresses | |
| 650 | 4 | |a Gene Expression |v Congresses | |
| 650 | 4 | |a Microarray Analysis |x methods |v Congresses | |
| 650 | 4 | |a Sequence Analysis |x methods |v Congresses | |
| 650 | 0 | 7 | |a Bioinformatik |0 (DE-588)4611085-9 |2 gnd |9 rswk-swf |
| 655 | 7 | |0 (DE-588)1071861417 |a Konferenzschrift |y 2008 |z Atlanta Ga. |2 gnd-content | |
| 689 | 0 | 0 | |a Bioinformatik |0 (DE-588)4611085-9 |D s |
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| 700 | 1 | |a Măndoiu, Ion |e Sonstige |4 oth | |
| 711 | 2 | |a ISBRA |n 4 |d 2008 |c Atlanta, Ga. |j Sonstige |0 (DE-588)10202674-9 |4 oth | |
| 830 | 0 | |a Lecture Notes in Computer Science |v 4983 : Lecture notes in bioinformatics |w (DE-604)BV000000607 |9 4983 | |
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| 943 | 1 | |a oai:aleph.bib-bvb.de:BVB01-016508582 | |
Datensatz im Suchindex
| _version_ | 1820875037638393856 |
|---|---|
| adam_text |
TABLE OF CONTENTS
INVITED KEYNOTE TALK:
SET-LEVEL ANALYSES FOR GENOME-WIDE ASSOCIATION
DAT
A (ABSTRACT
) 1
DAN L. NICOLAE, OMAR DE LA CRUZ, WILLIAM WEN, BAOGUAN KE, AND
MINSUN SONG
HIERARCHICAL CLUSTERIN
G USING CONSTRAINT
S 2
MARIANA KANT, MAURICE LEBON, AND DAVID SANKOFF
TH
E GENE-DUPLICATION PROBLEM
: NEAR-LINEAR TIME ALGORITHMS FOR NNI
BASED LOCAL SEARCHES 14
MUKUL S. BANSAL AND OLIVER EULENSTEIN
A DISTANCE-BASED METHOD FOR DETECTING HORIZONTAL GENE TRANSFER IN
WHOLE GENOMES 26
XINTAO WEI, LENORE COWEN, CARLA BRODLEY, ARTHUR BRADY,
D. SCULLEY, AND DONNA K. SLONIM
AN APPROACH FOR DETERMINING EVOLUTIONAR
Y DISTANCE IN NETWORK-BASED
PHYLOGENETIC ANALYSIS 38
TINGTING ZHOU, KEITH C.C. CHAN, YI PAN, AND ZHENGHUA WANG
PAIRWISE STATISTICA
L SIGNIFICANCE VERSUS DATABAS
E STATISTICA
L SIGNIFICANCE
FOR LOCAL ALIGNMENT OF PROTEI
N SEQUENCES 50
ANKIT AGRAWAL, VOLKER BRENDEL, AND XIAOQIU HUANG
ESTIMATIN
G PAIRWISE STATISTICA
L SIGNIFICANCE OF PROTEI
N LOCAL ALIGNMENTS
USING A CLUSTERING-CLASSIFICATION APPROACH BASED ON AMINO ACID
COMPOSITION 62
ANKIT AGRAWAL, ARKA GHOSH, AND XIAOQIU HUANG
GAPPE
D EXTENSION FOR LOCAL MULTIPLE ALIGNMENT OF INTERSPERSED DNA
REPEAT
S 74
TODD J. TREANGEN, AARON E. DARLING, MARK A. RAGAN, AND
XAVIER MESSEGUER
IMPROVE
D ALIGNMEN
T OF PROTEI
N SEQUENCE
S BASE
D O
N COMMO
N PART
S .
. 8
7
DAVID HOKSZA
INVITED KEYNOTE TALK:
COMPUTIN
G P-VALUES FOR PEPTID
E IDENTIFICATIONS
IN MASS SPECTROMETR
Y 100
NIKITA ARNOLD, TEMA FRIDMAN, ROBERT M. DAY, AND ANDREY A. GORIN
GESCANNT DURCH
BIBLIOGRAFISCHE INFORMATIONEN
HTTP://D-NB.INFO/988057417
DIGITALISIERT DURCH
XVI TABLE OF CONTENTS
PFP
: A COMPUTATIONA
L FRAMEWORK FOR PHYLOGENETI
C FOOTPRINTIN
G IN
PROKARYOTI
C GENOMES 110
DONGSHENG CHE, GUOJUN LI, SHANE T. JENSEN, JUN S. LIU, AND
YING XU
ACCELERATING TH
E NEIGHBOR-JOININ
G ALGORITH
M USING TH
E ADAPTIV
E
BUECKET DAT
A STRUCTUR
E 122
LEONID ZASLAVSKY AND TATIANA A. TATUSOVA
GENERALIZED GENE ADJACENCIES, GRAP
H BANDWIDT
H AN
D CLUSTER
S IN YEAST
EVOLUTION 134
QIAN ZHU, ZAKY ADAM, VICKY CHOI, AND DAVID SANKOFF
PHYSICOCHEMICAL CORRELATIO
N BETWEEN AMIN
O ACID SITES IN SHOR
T
SEQUENCES UNDE
R SELECTIVE PRESSUR
E 146
DAVID CAMPO, ZOYA DIMITROVA, AND YURI KHUDYAKOV
HCV QUASISPECIES ASSEMBLY USING NETWORK FLOWS 159
KELLY WESTBROOKS, IRINA ASTROVSKAYA, DAVID CAMPO,
YURI KHUDYAKOV, PIOTR BERRNAN, AND ALEX ZELIKOVSKY
A DYNAMI
C PROGRAMMIN
G ALGORITH
M FOR DE NOVO PEPTID
E SEQUENCING
WIT
H VARIABLE SCORING 171
MATTHEW A. GOTO AND ERIC J. SCHWABE
INVITED KEYNOTE TALK:
HAPLOTYP
E SHARIN
G FOR GENOME-WIDE
CASE-CONTROL ASSOCIATION STUDIE
S (ABSTRACT
) 183
ANDREW S. ALLEN
INCORPORATIN
G LITERATUR
E KNOWLEDGE IN BAYESIAN NETWORK FOR INFERRING
GENE NETWORKS WIT
H GENE EXPRESSIO
N DAT
A 184
EYAD ALMASRI, PETER LARSEN, GUANRAO CHEN, AND YANG DAI
INTEGRATIV
E NETWORK COMPONEN
T ANALYSIS FOR REGULATOR
Y NETWORK
RECONSTRUCTION 196
CHEN WANG, JIANHUA XUAN, LI CHEN, PO ZHAO, YUE WANG,
ROBERT CLARKE, AND ERIC P. HOFFMAN
A GRAPH-THEORETI
C METHO
D FOR MINING OVERLAPPIN
G FUNCTIONA
L
MODULES IN PROTEI
N INTERACTIO
N NETWORKS 208
MIN LI, JIANXIN WANG, AND JIANER CHEN
IDENTIFICATION OF TRANSCRIPTIO
N FACTO
R BINDIN
G SITES IN PROMOTE
R
REGIONS BY MODULARIT
Y ANALYSIS OF TH
E MOTIF CO-OCCURRENCE GRAP
H 220
ALEXANDRE P. FRANCISCO, ARLINDO L. OLIVEIRA, AND ANA T. FREITAS
MEAN SQUARED RESIDUE BASED BICLUSTERING ALGORITHM
S 232
STEFAN GREMALSCHI AND GULSAH ALTUN
TABLE OF CONTENTS XVII
SPARSE DECOMPOSITION OF GENE EXPRESSION DAT
A T
O INFER TRANSCRIPTIONAL
MODULES GUIDED BY MOTIF INFORMATION 244
TING GONG, JIANHUA XUAN, LI CHEN, REBECCA B. RIGGINS, YUE WANG,
ERIC P. HOFFMAN, AND ROBERT CLARKE
A NOVEL METRI
C FOR REDUNDAN
T GENE ELIMINATIO
N BASED ON
DISCRIMINATIVE CONTRIBUTIO
N 256
XUE-QIANG ZENG, GUO-ZHENG LI, JACK Y. YANG, AND MARY QU YANG
NETWORK-BASED INFERENCE OF CANCER PROGRESSION FROM MICROARRAY
DAT
A 268
YONGJIN PARK, STANLEY SHACKNEY, AND RUSSELL SCHWARTZ
INVITED KEYNOTE TALK:
QUIET REVOLUTION: CONNECTIVITY IN TH
E CANCER
RESEARCH COMMUNITY (ABSTRACT
) 280
KENNETH BUETOW
WAVELET-BASED 3-D MULTIFRACTAL SPECTRU
M WIT
H APPLICATIONS IN BREAST
MRI IMAGES 281
GORDANA DERADO, KICHUN LEE, ORIETTA NICOLIS, F. DUBOIS BOWMAN,
MARY NEWELL, FABRIZIO F. RUGGERI, AND BRANI VIDAKOVIC
ACCURAT
E INVERSE CONSISTENT NON-RIGID IMAGE REGISTRATIO
N AN
D IT
S
APPLICATION ON AUTOMATI
C RE-CONTOURING 293
QINGGUO ZENG AND YUNMEI CHEN
GLYCOBROWSER: A TOOL FOR CONTEXTUA
L VISUALIZATION OF BIOLOGICAL DAT
A
AN
D PATHWAY
S USING ONTOLOGIES 305
MATTHEW EAVENSON, MACIEJ JANIK, SHRAVYA NIMMAGADDA,
JOHN A. MILLER, KRYS J. KOCHUT, AND WILLIAM S. YORK
PATTERN MATCHING IN RNA STRUCTURES 317
KEJIE LI, REAZUR RAHMAN, ADITI GUPTA, PRASAD SIDDAVATAM, AND
MICHAEL GRIBSKOV
TH
E USE OF A CONFORMATIONAL ALPHABE
T FOR FAST ALIGNMENT OF PROTEI
N
STRUCTURE
S 331
WEI-MOU ZHENG
ON-THE-FL
Y ROTAME
R PAI
R ENERGY EVALUATION IN PROTEI
N DESIGN 343
ANDREW LEAVER-FAY, JACK SNOEYINK, AND BRIAN KUHLMAN
INVITED KEYNOTE TALK:
INTEGRATIVE VIRAL MOLECULAR EPIDEMIOLOGY:
HEPATITI
S C VIRUS MODELING 355
JAMES LARA, ZOYA DIMITROVA, AND YURI KHUDYAKOV
MULTIPLE KERNEL SUPPOR
T VECTOR REGRESSION FOR SIRNA EFFICACY
PREDICTIO
N 367
SHIBIN QIU AND TERRAN LANE
XVIII TABLE OF CONTENTS
HIERARCHICAL CLUSTERIN
G SUPPOR
T VECTOR MACHINES FOR CLASSIFYING TYPE-
2
DIABETES PATIENT
S 379
WEI ZHONG, RICK CHOW, RICHARD STOLZ, JIEYUE HE, AND MARSHA DOWELL
COMPUTATIONA
L MUTAGENESIS OF
E. COLI LAC
REPRESSOR: INSIGHT INT
O
STRUCTURE-FUNCTIO
N RELATIONSHIP
S AN
D ACCURAT
E PREDICTIO
N OF MUTAN
T
ACTIVITY 390
MAJID MASSO, KAHKESHAN HIJAZI, NIDA PARVEZ, AND IOSIF I. VAISMAN
EVALUATIN
G GENETIC ALGORITHM
S IN PROTEIN-LIGAN
D DOCKING 402
RAFAEL OERDOEG AND VINCE GROLMUSZ
A HIDDEN MARKOV MODEL APPROAC
H FOR PREDICTIO
N OF GENOMIC
ALTERATION
S FROM GENE EXPRESSIO
N PROFILING 414
HUIMIN GENG, HESHAM H. ALI, AND WING C. CHAN
EVOLUTIONAR
Y ALGORITH
M FOR FEATUR
E SUBSET SELECTION IN PREDICTIN
G
TUMOR OUTCOMES USING MICROARRA
Y DAT
A 426
QIHUA TAN, MADS THOMASSEN, KIRSTEN M. JOCHUMSEN,
JING HUA ZHAO, KAARE CHRISTENSEN, AND TORBEN A. KRUSE
INCORPORATIN
G KNOWLEDGE OF TOPOLOGY IMPROVES RECONSTRUCTIO
N OF
INTERACTIO
N NETWORKS FROM MICROARRA
Y DAT
A 434
PETER LARSEN, EYAD ALMASRI, GUANRAO CHEN, AND YANG DAI
INVITED KEYNOTE TALK:
DAT
A MINING AN
D STATISTICA
L METHOD
S FOR
ANALYZING MICROARRAY EXPERIMENT
S (ABSTRACT
) 444
SHIN-LIAN LO, KWOK-LEUNG TSUI, AND BENJAMIN BARWICK
SEVEN VARIATION
S OF A
N ALIGNMENT WORKFLOW - AN ILLUSTRATIO
N OF AGILE
PROCESS DESIGN AN
D MANAGEMEN
T IN BIO-JETI 445
ANNA-LENA LAMPRECHT, TIZIANA MARGARIA, AND BERNHARD STEFFEN
SUPPORTIN
G COMPUTATIONA
L SYSTEMS SCIENCE: GENOMIC ANALYSIS TOOL
FEDERATIONS USING ASPECT
S AN
D AO
P 457
DAVID STOTTS, KEITH LEE, AND IVAN RUSYN
BIODQ: DAT
A QUALIT
Y ESTIMATIO
N AN
D MANAGEMEN
T FOR GENOMICS
DATABASE
S 469
ALEXANDRA MARTINEZ, JOACHIM HAMMER, AND SANJAY RANKA
STEPPED LINEAR REGRESSION T
O ACCURATEL
Y ASSESS STATISTICA
L SIGNIFICANCE
IN BATC
H CONFOUNDED DIFFERENTIAL EXPRESSION ANALYSIS 481
JUNTAO LI, JIANHUA LIU, AND R. KRISHNA MURTHY KARUTURI
BAGGING MULTIPLE COMPARISONS FROM MICROARRAY DAT
A 492
DIMITRIS N. POLITIS
TABLE OF CONTENTS XIX
HUMA
N BLOOD-BRAIN DIFFERENTIAL GENE-EXPRESSION CORRELATES WIT
H
DIPEPTID
E FREQUENCY OF GENE PRODUCT
S 504
SHANDAR AHMAD
AUTHOR INDEX
509 |
| adam_txt |
TABLE OF CONTENTS
INVITED KEYNOTE TALK:
SET-LEVEL ANALYSES FOR GENOME-WIDE ASSOCIATION
DAT
A (ABSTRACT
) 1
DAN L. NICOLAE, OMAR DE LA CRUZ, WILLIAM WEN, BAOGUAN KE, AND
MINSUN SONG
HIERARCHICAL CLUSTERIN
G USING CONSTRAINT
S 2
MARIANA KANT, MAURICE LEBON, AND DAVID SANKOFF
TH
E GENE-DUPLICATION PROBLEM
: NEAR-LINEAR TIME ALGORITHMS FOR NNI
BASED LOCAL SEARCHES 14
MUKUL S. BANSAL AND OLIVER EULENSTEIN
A DISTANCE-BASED METHOD FOR DETECTING HORIZONTAL GENE TRANSFER IN
WHOLE GENOMES 26
XINTAO WEI, LENORE COWEN, CARLA BRODLEY, ARTHUR BRADY,
D. SCULLEY, AND DONNA K. SLONIM
AN APPROACH FOR DETERMINING EVOLUTIONAR
Y DISTANCE IN NETWORK-BASED
PHYLOGENETIC ANALYSIS 38
TINGTING ZHOU, KEITH C.C. CHAN, YI PAN, AND ZHENGHUA WANG
PAIRWISE STATISTICA
L SIGNIFICANCE VERSUS DATABAS
E STATISTICA
L SIGNIFICANCE
FOR LOCAL ALIGNMENT OF PROTEI
N SEQUENCES 50
ANKIT AGRAWAL, VOLKER BRENDEL, AND XIAOQIU HUANG
ESTIMATIN
G PAIRWISE STATISTICA
L SIGNIFICANCE OF PROTEI
N LOCAL ALIGNMENTS
USING A CLUSTERING-CLASSIFICATION APPROACH BASED ON AMINO ACID
COMPOSITION 62
ANKIT AGRAWAL, ARKA GHOSH, AND XIAOQIU HUANG
GAPPE
D EXTENSION FOR LOCAL MULTIPLE ALIGNMENT OF INTERSPERSED DNA
REPEAT
S 74
TODD J. TREANGEN, AARON E. DARLING, MARK A. RAGAN, AND
XAVIER MESSEGUER
IMPROVE
D ALIGNMEN
T OF PROTEI
N SEQUENCE
S BASE
D O
N COMMO
N PART
S .
. 8
7
DAVID HOKSZA
INVITED KEYNOTE TALK:
COMPUTIN
G P-VALUES FOR PEPTID
E IDENTIFICATIONS
IN MASS SPECTROMETR
Y 100
NIKITA ARNOLD, TEMA FRIDMAN, ROBERT M. DAY, AND ANDREY A. GORIN
GESCANNT DURCH
BIBLIOGRAFISCHE INFORMATIONEN
HTTP://D-NB.INFO/988057417
DIGITALISIERT DURCH
XVI TABLE OF CONTENTS
PFP
: A COMPUTATIONA
L FRAMEWORK FOR PHYLOGENETI
C FOOTPRINTIN
G IN
PROKARYOTI
C GENOMES 110
DONGSHENG CHE, GUOJUN LI, SHANE T. JENSEN, JUN S. LIU, AND
YING XU
ACCELERATING TH
E NEIGHBOR-JOININ
G ALGORITH
M USING TH
E ADAPTIV
E
BUECKET DAT
A STRUCTUR
E 122
LEONID ZASLAVSKY AND TATIANA A. TATUSOVA
GENERALIZED GENE ADJACENCIES, GRAP
H BANDWIDT
H AN
D CLUSTER
S IN YEAST
EVOLUTION 134
QIAN ZHU, ZAKY ADAM, VICKY CHOI, AND DAVID SANKOFF
PHYSICOCHEMICAL CORRELATIO
N BETWEEN AMIN
O ACID SITES IN SHOR
T
SEQUENCES UNDE
R SELECTIVE PRESSUR
E 146
DAVID CAMPO, ZOYA DIMITROVA, AND YURI KHUDYAKOV
HCV QUASISPECIES ASSEMBLY USING NETWORK FLOWS 159
KELLY WESTBROOKS, IRINA ASTROVSKAYA, DAVID CAMPO,
YURI KHUDYAKOV, PIOTR BERRNAN, AND ALEX ZELIKOVSKY
A DYNAMI
C PROGRAMMIN
G ALGORITH
M FOR DE NOVO PEPTID
E SEQUENCING
WIT
H VARIABLE SCORING 171
MATTHEW A. GOTO AND ERIC J. SCHWABE
INVITED KEYNOTE TALK:
HAPLOTYP
E SHARIN
G FOR GENOME-WIDE
CASE-CONTROL ASSOCIATION STUDIE
S (ABSTRACT
) 183
ANDREW S. ALLEN
INCORPORATIN
G LITERATUR
E KNOWLEDGE IN BAYESIAN NETWORK FOR INFERRING
GENE NETWORKS WIT
H GENE EXPRESSIO
N DAT
A 184
EYAD ALMASRI, PETER LARSEN, GUANRAO CHEN, AND YANG DAI
INTEGRATIV
E NETWORK COMPONEN
T ANALYSIS FOR REGULATOR
Y NETWORK
RECONSTRUCTION 196
CHEN WANG, JIANHUA XUAN, LI CHEN, PO ZHAO, YUE WANG,
ROBERT CLARKE, AND ERIC P. HOFFMAN
A GRAPH-THEORETI
C METHO
D FOR MINING OVERLAPPIN
G FUNCTIONA
L
MODULES IN PROTEI
N INTERACTIO
N NETWORKS 208
MIN LI, JIANXIN WANG, AND JIANER CHEN
IDENTIFICATION OF TRANSCRIPTIO
N FACTO
R BINDIN
G SITES IN PROMOTE
R
REGIONS BY MODULARIT
Y ANALYSIS OF TH
E MOTIF CO-OCCURRENCE GRAP
H 220
ALEXANDRE P. FRANCISCO, ARLINDO L. OLIVEIRA, AND ANA T. FREITAS
MEAN SQUARED RESIDUE BASED BICLUSTERING ALGORITHM
S 232
STEFAN GREMALSCHI AND GULSAH ALTUN
TABLE OF CONTENTS XVII
SPARSE DECOMPOSITION OF GENE EXPRESSION DAT
A T
O INFER TRANSCRIPTIONAL
MODULES GUIDED BY MOTIF INFORMATION 244
TING GONG, JIANHUA XUAN, LI CHEN, REBECCA B. RIGGINS, YUE WANG,
ERIC P. HOFFMAN, AND ROBERT CLARKE
A NOVEL METRI
C FOR REDUNDAN
T GENE ELIMINATIO
N BASED ON
DISCRIMINATIVE CONTRIBUTIO
N 256
XUE-QIANG ZENG, GUO-ZHENG LI, JACK Y. YANG, AND MARY QU YANG
NETWORK-BASED INFERENCE OF CANCER PROGRESSION FROM MICROARRAY
DAT
A 268
YONGJIN PARK, STANLEY SHACKNEY, AND RUSSELL SCHWARTZ
INVITED KEYNOTE TALK:
QUIET REVOLUTION: CONNECTIVITY IN TH
E CANCER
RESEARCH COMMUNITY (ABSTRACT
) 280
KENNETH BUETOW
WAVELET-BASED 3-D MULTIFRACTAL SPECTRU
M WIT
H APPLICATIONS IN BREAST
MRI IMAGES 281
GORDANA DERADO, KICHUN LEE, ORIETTA NICOLIS, F. DUBOIS BOWMAN,
MARY NEWELL, FABRIZIO F. RUGGERI, AND BRANI VIDAKOVIC
ACCURAT
E INVERSE CONSISTENT NON-RIGID IMAGE REGISTRATIO
N AN
D IT
S
APPLICATION ON AUTOMATI
C RE-CONTOURING 293
QINGGUO ZENG AND YUNMEI CHEN
GLYCOBROWSER: A TOOL FOR CONTEXTUA
L VISUALIZATION OF BIOLOGICAL DAT
A
AN
D PATHWAY
S USING ONTOLOGIES 305
MATTHEW EAVENSON, MACIEJ JANIK, SHRAVYA NIMMAGADDA,
JOHN A. MILLER, KRYS J. KOCHUT, AND WILLIAM S. YORK
PATTERN MATCHING IN RNA STRUCTURES 317
KEJIE LI, REAZUR RAHMAN, ADITI GUPTA, PRASAD SIDDAVATAM, AND
MICHAEL GRIBSKOV
TH
E USE OF A CONFORMATIONAL ALPHABE
T FOR FAST ALIGNMENT OF PROTEI
N
STRUCTURE
S 331
WEI-MOU ZHENG
ON-THE-FL
Y ROTAME
R PAI
R ENERGY EVALUATION IN PROTEI
N DESIGN 343
ANDREW LEAVER-FAY, JACK SNOEYINK, AND BRIAN KUHLMAN
INVITED KEYNOTE TALK:
INTEGRATIVE VIRAL MOLECULAR EPIDEMIOLOGY:
HEPATITI
S C VIRUS MODELING 355
JAMES LARA, ZOYA DIMITROVA, AND YURI KHUDYAKOV
MULTIPLE KERNEL SUPPOR
T VECTOR REGRESSION FOR SIRNA EFFICACY
PREDICTIO
N 367
SHIBIN QIU AND TERRAN LANE
XVIII TABLE OF CONTENTS
HIERARCHICAL CLUSTERIN
G SUPPOR
T VECTOR MACHINES FOR CLASSIFYING TYPE-
2
DIABETES PATIENT
S 379
WEI ZHONG, RICK CHOW, RICHARD STOLZ, JIEYUE HE, AND MARSHA DOWELL
COMPUTATIONA
L MUTAGENESIS OF
E. COLI LAC
REPRESSOR: INSIGHT INT
O
STRUCTURE-FUNCTIO
N RELATIONSHIP
S AN
D ACCURAT
E PREDICTIO
N OF MUTAN
T
ACTIVITY 390
MAJID MASSO, KAHKESHAN HIJAZI, NIDA PARVEZ, AND IOSIF I. VAISMAN
EVALUATIN
G GENETIC ALGORITHM
S IN PROTEIN-LIGAN
D DOCKING 402
RAFAEL OERDOEG AND VINCE GROLMUSZ
A HIDDEN MARKOV MODEL APPROAC
H FOR PREDICTIO
N OF GENOMIC
ALTERATION
S FROM GENE EXPRESSIO
N PROFILING 414
HUIMIN GENG, HESHAM H. ALI, AND WING C. CHAN
EVOLUTIONAR
Y ALGORITH
M FOR FEATUR
E SUBSET SELECTION IN PREDICTIN
G
TUMOR OUTCOMES USING MICROARRA
Y DAT
A 426
QIHUA TAN, MADS THOMASSEN, KIRSTEN M. JOCHUMSEN,
JING HUA ZHAO, KAARE CHRISTENSEN, AND TORBEN A. KRUSE
INCORPORATIN
G KNOWLEDGE OF TOPOLOGY IMPROVES RECONSTRUCTIO
N OF
INTERACTIO
N NETWORKS FROM MICROARRA
Y DAT
A 434
PETER LARSEN, EYAD ALMASRI, GUANRAO CHEN, AND YANG DAI
INVITED KEYNOTE TALK:
DAT
A MINING AN
D STATISTICA
L METHOD
S FOR
ANALYZING MICROARRAY EXPERIMENT
S (ABSTRACT
) 444
SHIN-LIAN LO, KWOK-LEUNG TSUI, AND BENJAMIN BARWICK
SEVEN VARIATION
S OF A
N ALIGNMENT WORKFLOW - AN ILLUSTRATIO
N OF AGILE
PROCESS DESIGN AN
D MANAGEMEN
T IN BIO-JETI 445
ANNA-LENA LAMPRECHT, TIZIANA MARGARIA, AND BERNHARD STEFFEN
SUPPORTIN
G COMPUTATIONA
L SYSTEMS SCIENCE: GENOMIC ANALYSIS TOOL
FEDERATIONS USING ASPECT
S AN
D AO
P 457
DAVID STOTTS, KEITH LEE, AND IVAN RUSYN
BIODQ: DAT
A QUALIT
Y ESTIMATIO
N AN
D MANAGEMEN
T FOR GENOMICS
DATABASE
S 469
ALEXANDRA MARTINEZ, JOACHIM HAMMER, AND SANJAY RANKA
STEPPED LINEAR REGRESSION T
O ACCURATEL
Y ASSESS STATISTICA
L SIGNIFICANCE
IN BATC
H CONFOUNDED DIFFERENTIAL EXPRESSION ANALYSIS 481
JUNTAO LI, JIANHUA LIU, AND R. KRISHNA MURTHY KARUTURI
BAGGING MULTIPLE COMPARISONS FROM MICROARRAY DAT
A 492
DIMITRIS N. POLITIS
TABLE OF CONTENTS XIX
HUMA
N BLOOD-BRAIN DIFFERENTIAL GENE-EXPRESSION CORRELATES WIT
H
DIPEPTID
E FREQUENCY OF GENE PRODUCT
S 504
SHANDAR AHMAD
AUTHOR INDEX
509 |
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| discipline | Biologie Informatik |
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| indexdate | 2025-01-10T15:09:16Z |
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| physical | XIX, 510 S. graph. Darst. |
| publishDate | 2008 |
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| series | Lecture Notes in Computer Science |
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| spelling | Bioinformatics research and applications fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings Ion Măndoiu ... (eds.) Berlin [u.a.] Springer 2008 XIX, 510 S. graph. Darst. txt rdacontent n rdamedia nc rdacarrier Lecture Notes in Computer Science 4983 : Lecture notes in bioinformatics Bioinformatics Congresses Computational Biology methods Congresses Computational biology Congresses Gene Expression Congresses Microarray Analysis methods Congresses Sequence Analysis methods Congresses Bioinformatik (DE-588)4611085-9 gnd rswk-swf (DE-588)1071861417 Konferenzschrift 2008 Atlanta Ga. gnd-content Bioinformatik (DE-588)4611085-9 s DE-604 Măndoiu, Ion Sonstige oth ISBRA 4 2008 Atlanta, Ga. Sonstige (DE-588)10202674-9 oth Lecture Notes in Computer Science 4983 : Lecture notes in bioinformatics (DE-604)BV000000607 4983 DNB Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=016508582&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Bioinformatics research and applications fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings Lecture Notes in Computer Science Bioinformatics Congresses Computational Biology methods Congresses Computational biology Congresses Gene Expression Congresses Microarray Analysis methods Congresses Sequence Analysis methods Congresses Bioinformatik (DE-588)4611085-9 gnd |
| subject_GND | (DE-588)4611085-9 (DE-588)1071861417 |
| title | Bioinformatics research and applications fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings |
| title_auth | Bioinformatics research and applications fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings |
| title_exact_search | Bioinformatics research and applications fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings |
| title_exact_search_txtP | Bioinformatics research and applications fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings |
| title_full | Bioinformatics research and applications fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings Ion Măndoiu ... (eds.) |
| title_fullStr | Bioinformatics research and applications fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings Ion Măndoiu ... (eds.) |
| title_full_unstemmed | Bioinformatics research and applications fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings Ion Măndoiu ... (eds.) |
| title_short | Bioinformatics research and applications |
| title_sort | bioinformatics research and applications fourth international symposium isbra 2008 atlanta ga usa may 6 9 2008 proceedings |
| title_sub | fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008 ; proceedings |
| topic | Bioinformatics Congresses Computational Biology methods Congresses Computational biology Congresses Gene Expression Congresses Microarray Analysis methods Congresses Sequence Analysis methods Congresses Bioinformatik (DE-588)4611085-9 gnd |
| topic_facet | Bioinformatics Congresses Computational Biology methods Congresses Computational biology Congresses Gene Expression Congresses Microarray Analysis methods Congresses Sequence Analysis methods Congresses Bioinformatik Konferenzschrift 2008 Atlanta Ga. |
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