Verfügbarkeit: Cell mechanics

Cell mechanics:

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Bibliographische Detailangaben
Format:	Buch
Sprache:	English
Veröffentlicht:	Amsterdam [u.a.] Elsevier, Acad. Press 2007
Schriftenreihe:	Methods in cell biology 83
Schlagworte:	Cellen (biologie) Cellules - Propriétés mécaniques Hücreler - Mekanik özellikler Onderzoeksmethoden Biomechanics Cell Physiological Phenomena Cells > Mechanical properties Cellular Structures Mechanotransduction, Cellular Zelle Biomechanik Aufsatzsammlung
Online-Zugang:	Inhaltsverzeichnis
Beschreibung:	XX, 608 S., [13] Bl. Ill., graph. Darst.
ISBN:	9780123705006

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adam_text	CONTENTS Contributors Preface PART I Basic Concept and Preparation Culture Substrates for Cell Mechanical Studies 1. Basic Rheology for Biologists Paul A.Janmey, Penelope C. Georges, and S0ren Hvidt I. Introduction and Rationale 4 II. Rheological Concepts 6 III. Rheological Instrumentation 11 IV. Experimental Design 13 V. Sample Preparation 20 VI. Special Considerations for Biological Samples 22 VII. Conclusions 24 References 26 2. Polyacrylamide Hydrogels for Cell Mechanics: Steps Toward Optimization and Alternative Uses Casey E. Randow, Penelope C. Georges, Paul A.Janmey, and Karen A. Beningo I. Introduction 30 II. Principle of the Polyacrylamide Hydrogel 31 III. Conjugation of Proteins to Polyacrylamide 33 IV. Optimizing the Placement of Beads for Traction Force Microscopy 40 V. Manipulation of Gel Geometry 41 VI. Concluding Remarks . 44 References 45 3. Microscopic Methods for Measuring the Ehsticity of Gel Substrates for Cell Culture: Microspheres, Microindenters, and Atomic Force Microscopy Margo T. Frey, Adam Engler, Dennis E. Bischer, Juliet Lee, and Yu-li Wang I. introduction 48 II. Probing with Microspheres Under Gravitational Forces 49 Contents III. Atomic Force Microscopy 50 IV. Probing with Spherically Tipped Glass Microindenters 53 V. Conclusions 64 References 64 4. Surface Patterning Irene Y. Tsai, Alfred J. Crosby, and Thomas P. Russell I. Introduction 68 II. Patterning with Electrodynamic Instabilities 69 III. Lithography Without a Clean Room 73 IV. Patterning at the Micro- and Nanoscale with Polymer Mixtures and Block Copolymers 80 V. Summary 84 References 85 5. Molecular Engineering of Cellular Environments: Cell Adhesion to Nano-Digital Surfaces Joachim P. Spatz and Benjamin Geiger I. Introduction: Sensing Cellular Environments 90 II. Nano-Digital Chemical Surfaces for Regulating Transmembrane-Receptor Clustering 95 III. Outlook for the Future 108 References 109 PART II Subcellular Mechanical Properties and Activities 6. Probing Cellular Mechanical Responses to Stimuli Using Ballistic Intracellular Nanorheology Porntula Panorchan, Jerry S. H. Lee, Brian R. Daniels, Thomas P. Kole, Yiider Tseng, and Denis Wirtz I. Introduction 117 II. Materials and Instrumentation 127 III. Procedures 129 IV. Pearls and Pitfalls 135 V. Concluding Remarks 136 References 137 Contents vii 7. Multiple-Particle Tracking and Two-Point Microrheology in Cells John C. Crocker and Brenton D. Hoffman I. Introduction 142 II. Principles of Passive Tracer Microrheology 146 III. Multiple-Particle Tracking Algorithms 149 IV. Computing Rheology from Tracer Trajectories 155 V. Error Sources in Multiple-Particle Tracking 161 VI. Instrument Requirements for High-Performance Tracking 168 VII. Example: Cultured Epithelial Cells 172 VIII. Conclusions and Future Directions 177 References 177 8. Imaging Stress Propagation in the Cytoplasm of a Living Cell Ning Wang, Shaohua Ни, and James P. Butler I. Introduction 180 II. Detecting External Stress-Induced Displacements in the Cytoplasm 181 III. Imaging Displacement and Stress Maps in a Live Cell 188 IV. Future Prospects 197 References 198 9. Probing Intracellular Force Distributions by High-Resolution Live Cell Imaging and Inverse Dynamics Linji, Dinah Loerke, Margaret Gardeł, and Gaudenz Danuser I. Introduction 200 II. Methods 202 III. Summary 227 IV. Appendix 228 References 231 10. Analysis of Microtubule Curvature Andrew D. Bicek, Brkan Tüzel, Daniel M. Kroll, and David J. Ödde I. Introduction 238 II. Rationale 240 III. Raw Data Collection 242 IV. Validation Strategy 245 V. Curvature Estimation Methods 256 VI. Results 258 VII. Discussion 264 VIII. Conclusions 265 References 266 Contents 11. Nuclear Mechanics and Methods Jan Lammerding, Kris Noel Dahl, Dennis E. Discher, and Roger D. Kamm I. Introduction 270 II. Experimental Methods for Probing Nuclear Mechanical Properties 273 III. Discussion and Prospects 288 IV. Outlook 290 References 291 PART III Cellular and Embryonic Mechanical Properties and Activities 12. The Use of Gelatin Substrates for Traction Force Microscopy in Rapidly Moving Cells Juliet Lee I. Introduction 298 II. Rationale 299 HI. Methods 300 IV. Applications of the Gelatin Traction Porce Assay to Study Mechano-signal Transduction in Moving Keratocytes 307 V. Other Applications and Future Directions 309 VI. Summary 310 References 310 13. Microfabricated Silicone Elastomeric Post Arrays for Measuring Traction Forces of Adherent Cells Nathan J. Sniadecki and Christopher S. Chen I. Introduction 314 II. Microfabrication of the Micropost Arrays 316 III. Characterization of Micropost Spring Constant 321 IV. Analysis of Traction Forces Through Micropost Deflections 323 V. Experimental Applications of Microposts and Discussion 326 References 327 14. Cell Adhesion Strengthening: Measurement and Analysis Kristin E. Michael and Andres J . Garda I. Introduction 330 II. The Cell Adhesion Process 330 III. Measurement Systems for Adhesion Characterization 331 Contents IV. Hydrodynamic Assay for Quantifying Adhesion Strength 334 V. Quantitative Biochemical Methods for Adhesion Analysis 338 VI. Simple Mathematical Modeling of Adhesion Strengthening Mechanics 341 VIL Discussion 344 References 344 15. Studying the Mechanics of Cellular Processes by Atomic Force Microscopy Manfred Radmacher I. Introduction 348 II. Instrumentation and Operation Modes 349 III. Operating Modes 353 IV. Investigations of Live Cells 358 V. Outlook 368 References 369 16. Using Force to Probe Single-Molecule Receptor—Cytoskeletal Anchoring Beneath the Surface of a Living Cell Evan Evans and Koji Kinoshita I. Generic Methods and Physical Foundations 374 II. Probing Bonds at Cell Surfaces 383 III. Future Challenge and Opportunity 393 References 395 17. High-Throughput Rheological Measurements with an Optical Stretcher Bryan Lincoln, Falk Wottawah, Stefan Schinkinger, Susanne Ebert, and Jochen Guck I. Introduction 398 II. Rationale 401 III. Methods 402 IV. Additional Notes on Equipment 412 V. Discussion 419 VI. Summary 421 References 421 18. Measuring Mechanical Properties of Embryos and Embryonic Tissues Lance Davidson and Ray Keller I. Introduction 426 II. Applying and Measuring Forces of 10 nN to 10 μΝ 428 III. Nanonewton Force Apparatus: Parts, Function, and Operation 431 IV. Preparation of Tissue Samples 432 Contents V. Measurement of the Time-Dependent Elasticity of Embryos or Tissue Expiants 434 VI. Spring and Dashpot Models of Viscoelasticity Represent More Complex Structural Sources 435 VII. Challenges of Working with Embryonic Tissues 435 VIII. Use of Standard Engineering Terms and Units 437 IX. Future Prospects 437 References 437 PART IV Mechanical Stimuli to Cells 19. Tools to Study Cell Mechanics and Mechanotransduction Tanmay P. Lele, Julia E. Sero, Benjamin D. Matthews, Sanjay Kumar, Shannon Xia, Martin Montoya- Zavala, Thomas Polte, Darryl Overby, Ning Wang, and Donald E. Ingber I. Introduction 444 II. Control of Cell Shape, Cytoskeletal Organization, and Cell Fate Switching 446 III. Probing Cell Mechanics, Cytoskeletal Structure, and Mechanotransduction 454 IV. Discussion and Future Implications 467 References 469 20. Magnetic Tweezers in Cell Biology Monica Tañase, Nicolas Biais, and Michael Sheetz I. Introduction 474 II. Physics of Magnetic Tweezers 475 III. Magnetic Field Considerations 477 IV. Magnetic Particle Selection 479 V. Basic Solenoid Apparatus 481 VI. Force Calibration 482 VII. Experimental Procedures 487 References 491 21. Optical Neuronal Guidance Allen Ehrlicher, Timo Betz, Björn Stuhrmann, Michael Gb gler, Daniel Koch, Kristian Frame, Yunbi Lu, and Josef Käs I. Introduction 496 II. Apparatus 501 III. Experiments 509 IV. Plausible Mechanisms of Optical Guidance 513 Contents Xl V. Summary 516 References 517 22. Microtissue Elasticity: Measurements by Atomic Force Microscopy and Its Influence on Cell Differentiation Adam J . Engler, Florian Rehfeldt, Shamik Sen, and Dennis E. Discher I. Introduction 522 II. AFM in Microelasticity Measurements 526 III. Materials Characterization 531 IV. Assessing Mechanical Influences on Cells 541 References 542 23. Demystifying the Effects of a Three-Dimensional Microenvironment in Tissue Morphogenesis Kandice R. Johnson, Jennifer L. Leight, and Valerie M. Weaver I. Introduction 548 II. Rationale 550 III. Methods 558 IV. Materials 573 V. Discussion 577 References 580 Index 585 Volumes in Series 601
adam_txt	CONTENTS Contributors Preface PART I Basic Concept and Preparation Culture Substrates for Cell Mechanical Studies 1. Basic Rheology for Biologists Paul A.Janmey, Penelope C. Georges, and S0ren Hvidt I. Introduction and Rationale 4 II. Rheological Concepts 6 III. Rheological Instrumentation 11 IV. Experimental Design 13 V. Sample Preparation 20 VI. Special Considerations for Biological Samples 22 VII. Conclusions 24 References 26 2. Polyacrylamide Hydrogels for Cell Mechanics: Steps Toward Optimization and Alternative Uses Casey E. Randow, Penelope C. Georges, Paul A.Janmey, and Karen A. Beningo I. Introduction 30 II. Principle of the Polyacrylamide Hydrogel 31 III. Conjugation of Proteins to Polyacrylamide 33 IV. Optimizing the Placement of Beads for Traction Force Microscopy 40 V. Manipulation of Gel Geometry 41 VI. Concluding Remarks . 44 References 45 3. Microscopic Methods for Measuring the Ehsticity of Gel Substrates for Cell Culture: Microspheres, Microindenters, and Atomic Force Microscopy Margo T. Frey, Adam Engler, Dennis E. Bischer, Juliet Lee, and Yu-li Wang I. introduction 48 II. Probing with Microspheres Under Gravitational Forces 49 Contents III. Atomic Force Microscopy 50 IV. Probing with Spherically Tipped Glass Microindenters 53 V. Conclusions 64 References 64 4. Surface Patterning Irene Y. Tsai, Alfred J. Crosby, and Thomas P. Russell I. Introduction 68 II. Patterning with Electrodynamic Instabilities 69 III. Lithography Without a Clean Room 73 IV. Patterning at the Micro- and Nanoscale with Polymer Mixtures and Block Copolymers 80 V. Summary 84 References 85 5. Molecular Engineering of Cellular Environments: Cell Adhesion to Nano-Digital Surfaces Joachim P. Spatz and Benjamin Geiger I. Introduction: Sensing Cellular Environments 90 II. Nano-Digital Chemical Surfaces for Regulating Transmembrane-Receptor Clustering 95 III. Outlook for the Future 108 References 109 PART II Subcellular Mechanical Properties and Activities 6. Probing Cellular Mechanical Responses to Stimuli Using Ballistic Intracellular Nanorheology Porntula Panorchan, Jerry S. H. Lee, Brian R. Daniels, Thomas P. Kole, Yiider Tseng, and Denis Wirtz I. Introduction 117 II. Materials and Instrumentation 127 III. Procedures 129 IV. Pearls and Pitfalls 135 V. Concluding Remarks 136 References 137 Contents vii 7. Multiple-Particle Tracking and Two-Point Microrheology in Cells John C. Crocker and Brenton D. Hoffman I. Introduction 142 II. Principles of Passive Tracer Microrheology 146 III. Multiple-Particle Tracking Algorithms 149 IV. Computing Rheology from Tracer Trajectories 155 V. Error Sources in Multiple-Particle Tracking 161 VI. Instrument Requirements for High-Performance Tracking 168 VII. Example: Cultured Epithelial Cells 172 VIII. Conclusions and Future Directions 177 References 177 8. Imaging Stress Propagation in the Cytoplasm of a Living Cell Ning Wang, Shaohua Ни, and James P. Butler I. Introduction 180 II. Detecting External Stress-Induced Displacements in the Cytoplasm 181 III. Imaging Displacement and Stress Maps in a Live Cell 188 IV. Future Prospects 197 References 198 9. Probing Intracellular Force Distributions by High-Resolution Live Cell Imaging and Inverse Dynamics Linji, Dinah Loerke, Margaret Gardeł, and Gaudenz Danuser I. Introduction 200 II. Methods 202 III. Summary 227 IV. Appendix 228 References 231 10. Analysis of Microtubule Curvature Andrew D. Bicek, Brkan Tüzel, Daniel M. Kroll, and David J. Ödde I. Introduction 238 II. Rationale 240 III. Raw Data Collection 242 IV. Validation Strategy 245 V. Curvature Estimation Methods 256 VI. Results 258 VII. Discussion 264 VIII. Conclusions 265 References 266 Contents 11. Nuclear Mechanics and Methods Jan Lammerding, Kris Noel Dahl, Dennis E. Discher, and Roger D. Kamm I. Introduction 270 II. Experimental Methods for Probing Nuclear Mechanical Properties 273 III. Discussion and Prospects 288 IV. Outlook 290 References 291 PART III Cellular and Embryonic Mechanical Properties and Activities 12. The Use of Gelatin Substrates for Traction Force Microscopy in Rapidly Moving Cells Juliet Lee I. Introduction 298 II. Rationale 299 HI. Methods 300 IV. Applications of the Gelatin Traction Porce Assay to Study Mechano-signal Transduction in Moving Keratocytes 307 V. Other Applications and Future Directions 309 VI. Summary 310 References 310 13. Microfabricated Silicone Elastomeric Post Arrays for Measuring Traction Forces of Adherent Cells Nathan J. Sniadecki and Christopher S. Chen I. Introduction 314 II. Microfabrication of the Micropost Arrays 316 III. Characterization of Micropost Spring Constant 321 IV. Analysis of Traction Forces Through Micropost Deflections 323 V. Experimental Applications of Microposts and Discussion 326 References 327 14. Cell Adhesion Strengthening: Measurement and Analysis Kristin E. Michael and Andres J . Garda I. Introduction 330 II. The Cell Adhesion Process 330 III. Measurement Systems for Adhesion Characterization 331 Contents IV. Hydrodynamic Assay for Quantifying Adhesion Strength 334 V. Quantitative Biochemical Methods for Adhesion Analysis 338 VI. Simple Mathematical Modeling of Adhesion Strengthening Mechanics 341 VIL Discussion 344 References 344 15. Studying the Mechanics of Cellular Processes by Atomic Force Microscopy Manfred Radmacher I. Introduction 348 II. Instrumentation and Operation Modes 349 III. Operating Modes 353 IV. Investigations of Live Cells 358 V. Outlook 368 References 369 16. Using Force to Probe Single-Molecule Receptor—Cytoskeletal Anchoring Beneath the Surface of a Living Cell Evan Evans and Koji Kinoshita I. Generic Methods and Physical Foundations 374 II. Probing Bonds at Cell Surfaces 383 III. Future Challenge and Opportunity 393 References 395 17. High-Throughput Rheological Measurements with an Optical Stretcher Bryan Lincoln, Falk Wottawah, Stefan Schinkinger, Susanne Ebert, and Jochen Guck I. Introduction 398 II. Rationale 401 III. Methods 402 IV. Additional Notes on Equipment 412 V. Discussion 419 VI. Summary 421 References 421 18. Measuring Mechanical Properties of Embryos and Embryonic Tissues Lance Davidson and Ray Keller I. Introduction 426 II. Applying and Measuring Forces of 10 nN to 10 μΝ 428 III. Nanonewton Force Apparatus: Parts, Function, and Operation 431 IV. Preparation of Tissue Samples 432 Contents V. Measurement of the Time-Dependent Elasticity of Embryos or Tissue Expiants 434 VI. Spring and Dashpot Models of Viscoelasticity Represent More Complex Structural Sources 435 VII. Challenges of Working with Embryonic Tissues 435 VIII. Use of Standard Engineering Terms and Units 437 IX. Future Prospects 437 References 437 PART IV Mechanical Stimuli to Cells 19. Tools to Study Cell Mechanics and Mechanotransduction Tanmay P. Lele, Julia E. Sero, Benjamin D. Matthews, Sanjay Kumar, Shannon Xia, Martin Montoya- Zavala, Thomas Polte, Darryl Overby, Ning Wang, and Donald E. Ingber I. Introduction 444 II. Control of Cell Shape, Cytoskeletal Organization, and Cell Fate Switching 446 III. Probing Cell Mechanics, Cytoskeletal Structure, and Mechanotransduction 454 IV. Discussion and Future Implications 467 References 469 20. Magnetic Tweezers in Cell Biology Monica Tañase, Nicolas Biais, and Michael Sheetz I. Introduction 474 II. Physics of Magnetic Tweezers 475 III. Magnetic Field Considerations 477 IV. Magnetic Particle Selection 479 V. Basic Solenoid Apparatus 481 VI. Force Calibration 482 VII. Experimental Procedures 487 References 491 21. Optical Neuronal Guidance Allen Ehrlicher, Timo Betz, Björn Stuhrmann, Michael Gb'gler, Daniel Koch, Kristian Frame, Yunbi Lu, and Josef Käs I. Introduction 496 II. Apparatus 501 III. Experiments 509 IV. Plausible Mechanisms of Optical Guidance 513 Contents Xl V. Summary 516 References 517 22. Microtissue Elasticity: Measurements by Atomic Force Microscopy and Its Influence on Cell Differentiation Adam J . Engler, Florian Rehfeldt, Shamik Sen, and Dennis E. Discher I. Introduction 522 II. AFM in Microelasticity Measurements 526 III. Materials Characterization 531 IV. Assessing Mechanical Influences on Cells 541 References 542 23. Demystifying the Effects of a Three-Dimensional Microenvironment in Tissue Morphogenesis Kandice R. Johnson, Jennifer L. Leight, and Valerie M. Weaver I. Introduction 548 II. Rationale 550 III. Methods 558 IV. Materials 573 V. Discussion 577 References 580 Index 585 Volumes in Series 601
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title_auth	Cell mechanics
title_exact_search	Cell mechanics
title_exact_search_txtP	Cell mechanics
title_full	Cell mechanics ed. by Yu-Li Wang
title_fullStr	Cell mechanics ed. by Yu-Li Wang
title_full_unstemmed	Cell mechanics ed. by Yu-Li Wang
title_short	Cell mechanics
title_sort	cell mechanics
topic	Cellen (biologie) gtt Cellules - Propriétés mécaniques Hücreler - Mekanik özellikler Onderzoeksmethoden gtt Biomechanics Cell Physiological Phenomena Cells Mechanical properties Cellular Structures Mechanotransduction, Cellular Zelle (DE-588)4067537-3 gnd Biomechanik (DE-588)4006880-8 gnd
topic_facet	Cellen (biologie) Cellules - Propriétés mécaniques Hücreler - Mekanik özellikler Onderzoeksmethoden Biomechanics Cell Physiological Phenomena Cells Mechanical properties Cellular Structures Mechanotransduction, Cellular Zelle Biomechanik Aufsatzsammlung
url	http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=016081643&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA
volume_link	(DE-604)BV002534878
work_keys_str_mv	AT wangyuli cellmechanics

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