Freshwater microbiology: biodiversity and dynamic interactions of microorganisms in the aquatic environment
Gespeichert in:
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| Format: | Buch |
| Sprache: | English |
| Veröffentlicht: |
Hoboken, NJ
Wiley
2005
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| Online-Zugang: | Table of contents Inhaltsverzeichnis |
| Beschreibung: | Includes bibliographical references and index |
| Beschreibung: | XVIII, 524 S. graph. Darst., Kt. cm |
| ISBN: | 0471485284 0471485292 |
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| 245 | 1 | 0 | |a Freshwater microbiology |b biodiversity and dynamic interactions of microorganisms in the aquatic environment |c David C. Sigee |
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| 650 | 4 | |a aFreshwater microbiology | |
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Datensatz im Suchindex
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| adam_text | FRESHWATER MICROBIOLOGY BIODIVERSITY AND DYNAMIC INTERACTIONS OF
MICROORGANISMS IN THE AQUATIC ENVIRONMENT DAVID C. SIGEE UNIVERSITY OF
MANCHESTER, UK JOHN WILEY SONS, LTD CONTENTS PREFACE COPYRIGHT
ACKNOWLEDGEMENTS 1 MICROBIAL DIVERSITY AND FRESHWATER ECOSYSTEMS 1.1
GENERAL INTRODUCTION 1.1.1 THE AQUATIC EXISTENCE 1.1.2 1.1.3 1.1.4 THE
GLOBAL WATER SUPPLY - LIMNOLOGY AND OCEANOGRAPHY FRESHWATER SYSTEMS:
SOME TERMS AND DEFINITIONS THE BIOLOGY OF FRESHWATER MICROORGANISMS A.
BIOLOGICAL DIVERSITY IN THE FRESHWATER ENVIRONMENT 1.2 BIODIVERSITY OF
MICROORGANISMS 1.2.1 DOMAINS OF LIFE 1.2.2 SIZE RANGE 1.2.3 AUTOTROPHS
AND HETEROTROPHS 1.2.4 PLANKTONIC AND BENTHIC MICROORGANISMS 1.2.5
METABOLICALLY ACTIVE AND INACTIVE STATES 1.2.6 EVOLUTIONARY STRATEGIES:
R-SELECTED AND K-SELECTED ORGANISMS BIODIVERSITY IN ECOSYSTEMS,
COMMUNITIES, AND SPECIES POPULATIONS 1.3.1 MAIN ECOSYSTEMS 1.3.2
DIVERSITY WITHIN SUBSIDIARY COMMUNITIES 1.3.3 BIODIVERSITY WITHIN
SINGLE-SPECIES POPULATIONS 1.3 B. ECOSYSTEMS 1.4 1.5 1.6 THE BIOFILM
COMMUNITY: A SMALL-SCALE FRESHWATER ECOSYSTEM 1.4.1 INTERACTIONS BETWEEN
MICROORGANISMS 1.4.2 BIOMASS FORMATION AND TRANSFER 1.4.3 1.4.4 THE
PELAGIC ECOSYSTEM: A LARGE-SCALE UNIT WITHIN THE LAKE ENVIRONMENT 1.5.1
INTERACTIONS BETWEEN ORGANISMS 1.5.2 1.5.3 1.5.4 HOMEOSTASIS AND
ECOSYSTEM STABILITY 1.6.1 STRESS FACTORS 1.6.2 1.6.3 MAINTENANCE OF THE
INTERNAL ENVIRONMENT INTERACTIONS WITH THE EXTERNAL ENVIRONMENT TROPHIC
CONNECTIONS AND BIOMASS TRANSFER MAINTENANCE OF THE INTERNAL ENVIRONMENT
INTERACTIONS WITH THE EXTERNAL ENVIRONMENT GENERAL THEORETICAL
PREDICTIONS: THE COMMUNITY RESPONSE OBSERVED STRESS RESPONSES: FROM
MOLECULES TO COMMUNITIES 1 1 1 1 3 4 4 4 4 6 10 11 12 15 15 16 16 17 18
19 20 20 21 21 21 23 28 28 29 30 30 31 CONTENTS 1.6.4 ASSESSMENT OF
ECOSYSTEM STABILITY 1.6.5 1.6.6 BIOLOGICAL RESPONSE SIGNATURES FOOD WEBS
IN LENTIC AND LOTIC SYSTEMS ECOSYSTEM STABILITY AND COMMUNITY STRUCTURE
C. 1.7 PELAGIC FOOD WEBS CASE STUDY 1.1 CASE STUDY 1.2 MICROBIAL FOOD
WEB ASSOCIATED WITH AN ALGAL BLOOM GENERAL FOOD WEB IN THE WATER COLUMN
OF LAKE BAIKAL (RUSSIA) 1.8 COMMUNITIES AND FOOD WEBS OF RUNNING WATERS
1.8.1 1.8.2 PELAGIC AND BENTHIC COMMUNITIES 1.8.3 THE MICROBIAL FOOD WEB
ALLOCHTHONOUS CARBON: DISSOLVED AND PARTICULATE MATTER IN RIVER SYSTEMS
2 FRESHWATER ENVIRONMENTS: THE INFLUENCE OF PHYSICO-CHEMICAL CONDITIONS
ON MICROBIAL COMMUNITIES A. INTRODUCTION 2.1 THE AQUATIC MEDIUM: WATER,
DISSOLVED AND PARTICULATE COMPONENTS 2.1.1 PARTICULATE MATTER 2.1.2
AQUATIC MATRIX 2.2 FRESHWATER ENVIRONMENTS B. LAKES 2.3 LAKE MORPHOLOGY
AND HYDROLOGY 2.3.1 LAKE MORPHOLOGY 2.3.2 2.4 LAKES AS ISOLATED
ENVIRONMENTS 2.4.1 ISOLATED DEVELOPMENT 2.4.2 2.5 CLIMATIC INFLUENCES ON
LAKES 2.5.1 2.5.2 BIOLOGICAL SIGNIFICANCE OF STRATIFICATION 2.5.3
TROPICAL LAKES POLAR AND SUB-POLAR LAKES LAKE HYDROLOGY AND THE
SURROUNDING TERRESTRIAL ENVIRONMENT LAKE BAIKAL: AN ANCIENT LAKE WITH A
DIVERSE AND UNIQUE FAUNA AND FLORA TEMPERATE LAKES - SEASONAL VARIATIONS
AND LAKE STRATIFICATION C. WETLANDS 2.6 GENERAL CHARACTERISTICS 2.6.1
2.6.2 UNIFYING FEATURES OF WETLANDS 2.6.3 CASE STUDIES ON WETLAND AREAS
CASE STUDY 2.1 TREBON BASIN BIOSPHERE RESERVE WETLAND DIVERSITY AND
GLOBAL SCALE THE ROLE OF WETLANDS IN ENERGY AND MATERIAL FLOW 2.7
WETLAND HABITATS AND COMMUNITIES 2.8 D. STREAMS AND RIVERS 2.9 2.10
COMPARISON OF LOTIC AND LENTIC SYSTEMS RIVER FLOW AND THE BENTHIC
COMMUNITY 2.10.1 2.10.2 FLOW CHARACTERISTICS OF LOTIC SYSTEMS INFLUENCE
OF WATER FLOW ON BENTHIC MICROORGANISMS 2.1 1 RIVER HYDROLOGY E.
ESTUARIES 2.12 RIVER INFLOW: WATER MIXING, ESTUARINE PRODUCTIVITY, AND
EUTROPHICATION OF COASTAL AREAS 31 32 34 34 34 34 36 40 40 42 43 47 47
47 47 48 52 53 53 53 57 60 60 62 63 65 66 67 68 68 68 68 69 69 70 71 72
72 73 73 75 78 79 80 CONTENTS 2.12.1 2.12.2 2.12.3 2.13 HABITATS AND
COMMUNITIES 2.13.1 PELAGIC ZONE 2.13.2 SEDIMENTS AND MUDFLATS MIXING OF
FRESH AND SALTWATERS HIGH PRODUCTIVITY OF ESTUARINE SYSTEMS
EUTROPHICATION OF SURROUNDING COASTAL AREAS F. ADVERSE AND EXTREME
CONDITIONS IN FRESHWATER ENVIRONMENTS 2.14 ADVERSE CONDITIONS AS PART OF
THE ENVIRONMENTAL CONTINUUM 2.14.1 VARIATIONS IN OXYGEN CONCENTRATION
2.14.2 NUTRIENT AVAILABILITY 2.14.3 SOLAR RADIATION 2.15 EXTREME
ENVIRONMENTAL CONDITIONS TEMPERATURE 2.15.2 PH 2.15.3 2.15.5 VARIATIONS
IN HYDROSTATIC PRESSURE 2.15.6 ORGANIC AND INORGANIC POLLUTION A
POTENTIALLY EXTREME MICROENVIRONMENT: THE AI-WATER SURFACE 2.16.1
CHEMICAL COMPOSITION OF THE SURFACE MICROLAYER 2.16.2 PHYSICAL PROCESSES
AND TRANSFORMATIONS IN THE SURFACE BIOFILM 2.1 6.3 MICROBIAL COMMUNITY
AT THE AIR-WATER INTERFACE MICROBIAL COMMUNITIES OF SNOW AND ICE: LIFE
IN THE FROZEN STATE 2.17.1 SNOW AND ICE AS AN EXTREME ENVIRONMENT 2.17.2
REQUIREMENT FOR WATER IN THE LIQUID STATE 2.17.3 SNOW ECOSYSTEMS 2.17.4
THE PHYSICAL PROPERTIES OF SNOW 2.17.5 SNOW AND ICE MICROORGANISMS
CONDITIONS OF LOW WATER AVAILABILITY: SALINE ENVIRONMENTS CONDITIONS OF
LOW WATER AVAILABILITY: ICE AND SNOW ENVIRONMENTS 2.16 2.17 3 ALGAE: THE
MAJOR MICROBIAL BIOMASS IN FRESHWATER SYSTEMS A. TAXONOMIC AND MOLECULAR
CHARACTERIZATION 3.1 MAJOR TAXONOMIC DIVISIONS OF FRESHWATER ALGAE 3.1.1
3.1.2 BIOCHEMICAL AND CYTOLOGICAL CHARACTERISTICS 3.1.3 ALGAL SPECIES:
TAXONOMY AND INTRASPECIFIC VARIATION 3.2.1 TAXONOMY OF ALGAL SPECIES
3.2.2 CHEMICAL DIVERSITY WITHIN SPECIES - ENZYME ANALYSIS, MOLECULAR
GROUPS. AND ELEMENTAL COMPOSITION MOLECULAR CHARACTERIZATION AND
IDENTIFICATION OF ALGAE INVESTIGATION OF GENE FUNCTION IN FRESHWATER
ALGAE MICROSCOPICAL APPEARANCE, MOTILITY AND ECOLOGICAL FEATURES GENERAL
SUMMARY OF THE DIFFERENT GROUPS 3.2 3.3 MOLECULAR ANALYSIS 3.3.1 3.3.2
B. SIZE, SHAPE, AND SURFACE MUCILAGE 3.4 PHYTOPLANKTON SIZE AND SHAPE.
3.4.1 CELL COUNTS AND BIOVOLUME 3.4.2 FROM PICOPLANKTON TO MACROPLANKTON
3.4.3 3.4.4 3.5.1 CHEMICAL COMPOSITION OF MUCILAGE BIOLOGICAL
SIGNIFICANCE OF SIZE AND SHAPE VARIATION IN SIZE AND SHAPE WITHIN
PHYTOPLANKTON POPULATIONS 3.5 MUCILAGINOUS AND NON-MUCILAGINOUS ALGAE 80
81 82 82 82 82 84 85 85 85 86 86 86 89 91 92 93 93 95 95 96 98 99 99 99
99 100 102 107 107 107 110 112 114 114 115 116 116 119 123 123 123 123
124 128 130 131 CONTENTS 3.5.2 3.5.3 ROLE OF MUCILAGE IN PHYTOPLANKTON
ACTIVITIES ENVIRONMENTAL IMPACT AND BIOGEOCHEMICAL CYCLES C. ACTIVITIES
WITHIN THE FRESHWATER ENVIRONMENT 3.6 3.7 3.8 3.9 BENTHIC ALGAE:
INTERACTIONS WITH PLANKTONIC ALGAE AND ECOLOGICAL SIGNIFICANCE 3.6.1
PLANKTONIC AND BENTHIC ALGAE 3.6.2 LAKE PERIPHYTON 3.6.3 BENTHIC ALGAE
IN FLOWING WATERS 3.6.4 ECOLOGICAL ROLE OF BENTHIC ALGAE TEMPORAL
ACTIVITIES OF FRESHWATER ALGAE 3.7.1 SHORT-TERM CHANGES: MOLECULAR AND
CELLULAR PROCESSES 3.7.2 MEDIUM-TERM CHANGES: ALGAL SUCCESSION 3.7.3
LONG-TERM CHANGES: VARIATIONS OVER A NUMBER OF YEARS PHYTOPLANKTON
DISTRIBUTION WITHIN THE WATER COLUMN CASE STUDY 3.1 ACTIVE MIGRATION OF
ALGAE 3.8.2 FRESHWATER ALGAE AND NUTRIENT STATUS OF THE ENVIRONMENT
3.9.1 3.9.2 VERTICAL ZONATION OF PHYTOPLANKTON IN A STRATIFIED LAKE
PASSIVE MOVEMENT OF ALGAE WITHIN THE WATER COLUMN PHYTOPLANKTON SPECIES
COMPOSITION AND LAKE NUTRIENT STATUS NUTRIENT STATUS OF RIVER
ENVIRONMENTS - EFFECT ON BENTHIC ALGAL BIOFILMS D. STRATEGIES FOR
SURVIVAL 3.10 STRATEGIES FOR SURVIVAL: THE PLANKTONIC ENVIRONMENT 3.10.1
MEROPLANKTONIC ALGAE 3.10.2 HETEROTROPHIC NUTRITION IN FRESHWATER ALGAE
3.1 1.1 ORGANOTROPHY 3.1 1.2 PHAGOTROPHY SURVIVAL IN SNOW AND ICE:
ADAPTATIONS OF CRYOPHILIC ALGAE 3.12.1 3.12.2 3.12.3 STRATEGIES FOR
UNSTABLE AND STABLE ENVIRONMENTS: R-SELECTED AND K-SELECTED ALGAE 3.11
3.12 MAJOR GROUPS OF CRYOPHILIC ALGAE LIFE CYCLES OF SNOW ALGAE
PHYSIOLOGICAL ADAPTATIONS OF SNOW ALGAE BIODIVERSITY IN THE ALGAL
COMMUNITY VARIETY OF FRESHWATER ALGAE: INDICES OF SPECIES DIVERSITY
3.13.1 THE PARADOX OF PHYTOPLANKTON DIVERSITY 3.13.2 BIODIVERSITY
INDICES 3.13.3 NUMERICAL COMPARISON OF PHYTOPLANKTON POPULATIONS 3.13.4
BIODIVERSITY AND ECOSYSTEM FUNCTION E. 3.13 4 COMPETITION FOR LIGHT 4.1
THE LIGHT ENVIRONMENT 4.1.1 4.1.2 4.1.3 4.1.4 PHOTOSYNTHETIC PROCESSES
IN THE FRESHWATER ENVIRONMENT 4.2.1 LIGHT AND DARK REACTIONS 4.2.2
PHOTOSYNTHETIC MICROORGANISMS 4.2.3 MEASUREMENT OF PHOTOSYNTHESIS 4.2.4
LIGHT AS A GROWTH RESOURCE 4.3.1 4.3.2 PHYSICAL PROPERTIES OF LIGHT:
TERMS AND UNITS OF MEASUREMENT LIGHT THRESHOLDS FOR BIOLOGICAL
ACTIVITIES LIGHT UNDER WATER: REFRACTION, ABSORPTION, AND SCATTERING
LIGHT ENERGY CONVERSION: FROM LAKE SURFACE TO ALGAL BIOMASS 4.2
PHOTOSYNTHETIC RESPONSE TO VARYING LIGHT INTENSITY STRATEGIES FOR LIGHT
UPTAKE AND UTILIZATION LIGHT-PHOTOSYNTHETIC RESPONSE IN DIFFERENT ALGAE
4.3 131 133 133 133 133 136 138 139 140 142 146 148 148 149 156 157 157
160 161 161 162 164 165 167 168 171 171 173 174 177 177 177 178 179 180
181 182 182 183 184 186 188 188 189 189 190 192 192 193 CONTENTS 4.4 4.5
4.6 4.7 4.8 4.9 4.3.3 CONSERVATION OF ENERGY 4.3.4 ALGAL GROWTH AND
PRODUCTIVITY 4.4.1 4.4.2 4.4.3 PHOTOSYNTHETIC BACTERIA 4.5.1 MAJOR
GROUPS 4.5.2 PHOTOSYNTHETIC PIGMENTS 4.5.3 BACTERIAL PRIMARY
PRODUCTIVITY PHOTOADAPTATION: RESPONSES OF AQUATIC ALGAE TO LIMITED
SUPPLIES OF LIGHT ENERGY 4.6.1 DIFFERENT ASPECTS OF LIGHT LIMITATION
4.6.2 VARIABLE LIGHT INTENSITY: LIGHT-RESPONSIVE GENE EXPRESSION 4.6.3
PHOTOSYNTHETIC RESPONSES TO LOW LIGHT INTENSITY 4.6.4 SPECTRAL
COMPOSITION OF LIGHT: CHANGES IN PIGMENT COMPOSITION CARBON UPTAKE AND
EXCRETION BY ALGAL CELLS CHANGES IN ENVIRONMENTAL AND PH 4.7.2 EXCRETION
OF DISSOLVED ORGANIC CARBON BY PHYTOPLANKTON CELLS COMPETITION FOR LIGHT
AND CARBON DIOXIDE BETWEEN ALGAE AND HIGHER PLANTS 4.8.1 THE BALANCE
BETWEEN ALGAE AND MACROPHYTES IN DIFFERENT AQUATIC ENVIRONMENTS LAKES OF
THE TREBON WETLANDS 4.8.2 DAMAGING EFFECTS OF HIGH LEVELS OF SOLAR
RADIATION: PHOTOINHIBITION 4.9.1 SPECIFIC MECHANISMS OF PHOTOINHIBITION
4.9.2 GENERAL EFFECTS OF PHOTOINHIBITION 4.9.3 4.9.4 PHOTOINHIBITION AND
CELL SIZE 4.9.5 4.9.6 DIVERSITY IN SMALL MOLECULAR WEIGHT SOLUTES AND
OSMOREGULATION PRIMARY PRODUCTION: CONCEPTS AND TERMS PRIMARY PRODUCTION
AND ALGAL BIOMASS FIELD MEASUREMENTS OF PRIMARY PRODUCTIVITY CASE STUDY
4.1 COMPETITION BETWEEN ALGAE AND MACROPHYTES IN SHALLOW PHYSIOLOGICAL
AND ENVIRONMENTAL ADAPTATIONS IN THE COMPETITION BETWEEN ALGAE AND
MACROPHYTES STRATEGIES FOR THE AVOIDANCE OF PHOTOINHIBITION LACK OF
PHOTOINHIBITION IN BENTHIC COMMUNITIES PHOTOINHIBITION IN EXTREME
HIGH-LIGHT ENVIRONMENTS 4.10 PERIODIC EFFECTS OF LIGHT ON SEASONAL AND
DIURNAL ACTIVITIES OF FRESHWATER BIOTA 4.10.1 SEASONAL PERIODICITY
4.10.2 DIURNAL CHANGES 4.10.3 4.10.4 CIRCADIAN RHYTHMS IN
DINOFLAGELLATES CIRCADIAN RHYTHMS IN BLUE-GREEN ALGAE 5 INORGANIC
NUTRIENTS: UPTAKE AND CYCLING IN FRESHWATER SYSTEMS 5.1 CHEMICAL
COMPOSITION OF NATURAL WATERS 5.1.1 5.1.2 AERIAL DEPOSITION OF NUTRIENTS
5.1.3 5.1.4 5.1.5 NUTRIENT UPTAKE AND GROWTH KINETICS 5.2.1 5.2.2 5.2.3
5.2.4 A. NITROGEN SOLUBLE INORGANIC MATTER IN LAKES AND RIVERS NUTRIENT
INFLOW FROM TERRESTRIAL SOURCES CHEMICAL REQUIREMENTS AND COMPOSITION OF
FRESHWATER BIOTA NUTRIENT AVAILABILITY AND CYCLING IN AQUATIC SYSTEMS
EMPIRICAL MODELS FOR ALGAL NUTRIENT KINETICS COMPETITION AND GROWTH IN
THE AQUATIC ENVIRONMENT NUTRIENT AVAILABILITY AND WATER MOVEMENT ACUTE
NUTRIENT DEPRIVATION AS AN ENVIRONMENTAL STRESS FACTOR CASE STUDY 5.1
ELEMENTAL COMPOSITION OF CERATIUM HIRUNDINELLA 5.2 5.3 BIOLOGICAL
AVAILABILITY OF NITROGEN IN FRESHWATER ENVIRONMENTS 5.3.1 SOLUBLE
NITROGENOUS COMPOUNDS 194 195 196 196 197 197 199 200 200 20 1 202 203
204 205 209 210 210 21 1 215 215 216 218 22 1 22 1 224 225 227 228 228
230 230 23 1 232 234 235 235 235 237 237 238 240 243 246 246 248 250 25
1 25 1 25 1 25 1 CONTENTS 5.4 THE NITROGEN CYCLE 5.4.1 5.4.2 UPTAKE OF
NITRATE AND AMMONIUM IONS BY ALGAE BIOCHEMICAL PROCESSES 5.5.2 5.6.1
5.6.3 5.6.4 ANAEROBIC ENVIRONMENT: NITROGEN-FIXING BACTERIA NITRATE
ENTRY AND UPTAKE (SOLUBLE INORGANIC TO INSOLUBLE ORGANIC NITROGEN)
COMPLEX ORGANIC NITROGEN (BIOMASS) TRANSFORMATIONS (SUCCESSIVE STATES OF
INSOLUBLE ORGANIC NITROGEN) REMINERALIZATION (INSOLUBLE ORGANIC TO
SOLUBLE INORGANIC NITROGEN) NITRIFICATION/DENITRIFICATION
(OXIDATION/REDUCTION OF SOLUBLE INORGANIC COMPOUNDS) 5.5 SPECIES
VARIATIONS IN NITRATE UPTAKE ENVIRONMENTAL REGULATION OF NITRATE
ASSIMILATION NITROGEN UPTAKE, ASSIMILATION, AND PHOTOSYNTHESIS
ECOLOGICAL SIGNIFICANCE OF NITROGEN FIXATION THE NITROGENASE ENZYME AND
STRATEGIES OF FIXATION HETEROCYSTS: NITROGEN FIXATION BY COLONIAL
BLUE-GREEN ALGAE DIURNAL CONTROL OF NITROGEN FIXATION: UNICELLULAR
BLUE-GREEN ALGAE 5.6 NITROGEN FIXATION B. PHOSPHORUS 5.7 OCCURRENCE AND
BIOLOGICAL AVAILABILITY OF PHOSPHORUS 5.7.1 PHOSPHORUS AVAILABILITY AND
LIMITATION 5.7.2 THE PHOSPHORUS CYCLE ADAPTATIONS OF FRESHWATER
MICROORGANISMS TO LOW PHOSPHORUS CONCENTRATIONS KINETICS OF PHOSPHORUS
UPTAKE LUXURY CONSUMPTION OF PHOSPHATE SECRETION OF ALKALINE PHOSPHATASE
5.8 C. SILICON: A WIDELY-AVAILABLE ELEMENT OF LIMITED METABOLIC
IMPORTANCE 5.9 THE SILICON CYCLE 5.10 SILICON AND DIATOMS 5.10.1 5.10.2
SI UPTAKE AND PHYTOPLANKTON SUCCESSION SI UPTAKE AND CELL-WALL FORMATION
D. TRACE ELEMENTS 5.1 1 BIOLOGICAL ROLE OF TRACE ELEMENTS 5.1 1.1 5.1
1.2 CYCLING OF IRON AND OTHER TRACE METALS IN THE AQUATIC ENVIRONMENT
5.12.1 THE IRON CYCLE 5.12.2 THE MANGANESE CYCLE ENVIRONMENTAL UPTAKE OF
TRACE ELEMENTS STIMULATION OF GROWTH IN AQUATIC ENVIRONMENTS IMPORTANCE
OF TRACE METALS IN THE CULTURE OF AQUATIC ALGAE BIOCHEMICAL ROLES OF
TRACE ELEMENTS 5.12 6 BACTERIA: THE MAIN HETEROTROPHIC MICROORGANISMS IN
FRESHWATER SYSTEMS A. GENERAL DIVERSITY WITHIN THE ENVIRONMENT 6.1.
GENERAL DIVERSITY, HABITAT PREFERENCES, AND ECOLOGICAL SIGNIFICANCE OF
FRESHWATER BACTERIA 6.1.1 GENERAL DIVERSITY 6.1.2 HABITAT PREFERENCES
6.1.3 TAXONOMIC, BIOCHEMICAL, AND MOLECULAR CHARACTERIZATION OF
FRESHWATER BACTERIA 6.2.1 SPECIES IDENTIFICATION ENVIRONMENTAL
SIGNIFICANCE OF FRESHWATER BACTERIA 6.2 254 254 255 255 255 257 257 258
258 259 260 260 260 26 262 263 265 265 265 266 269 269 269 27 1 272 272
274 274 275 279 280 280 28 1 28 1 282 283 283 286 287 287 287 287 288
290 29 1 29 1 CONTENTS 6.2.2 6.2.3 CASE STUDY 6.1 A RESPONSE TO
VARIATIONS IN THE SUPPLY OF DISSOLVED ORGANIC MATERIAL (DOM) GENETIC
MARKERS: DETECTION OF PARTICULAR STRAINS IN THE AQUATIC ENVIRONMENT
BIOCHEMICAL CHARACTERIZATION OF BACTERIAL COMMUNITIES CHANGES IN
BACTERIAL COMMUNITY FUNCTION AND COMPOSITION AS B. GENETIC INTERACTIONS
6.3 GENETIC DIVERSITY 6.3.1 CHROMOSOMAL AND ACCESSORY DNA 6.3.2 6.3.3
MECHANISMS FOR GENE TRANSFER IN FRESHWATER SYSTEMS 6.4.1 6.4.2 6.4.3
EVIDENCE FOR GENE TRANSFER IN THE AQUATIC ENVIRONMENT 6.5.1
RETROSPECTIVE ANALYSIS CASE STUDY 6.2 6.5.2 CASE STUDY 6.3 6.5.3 THE
ECOLOGICAL IMPORTANCE OF GENE TRANSFER IN FRESHWATER SYSTEMS TOTAL
GENETIC DIVERSITY: THE *COMMUNITY GENOME* TRANSFORMATION: UPTAKE OF
EXOGENOUS DNA TRANSDUCTION: GENE TRANSFER BETWEEN BACTERIA VIA
BACTERIOPHAGES CONJUGATION: TRANSFER OF PLASMID DNA BY DIRECT CELL
CONTACT 6.4 6.5 PLASMID-BORNE RESISTANCE IN AQUATIC BACTERIA PLASMID
TRANSFER IN PSEUDOMONAS AERUGINOSA LABORATORY (IN VITRO) STUDIES ON
PLASMID TRANSFER FIELD (IN SITU) STUDIES ON BACTERIAL GENE TRANSFER C.
METABOLIC ACTIVITIES 6.6 METABOLIC DIVERSITY OF FRESHWATER BACTERIA
6.6.1 KEY METABOLIC PARAMETERS 6.6.2 CO2 FIXATION 6.6.4 6.7
PHOTOSYNTHETIC BACTERIA 6.7.1 GENERAL CHARACTERISTICS 6.7.2 MOTILITY
6.7.3 ECOLOGY 6.8.1 BREAKDOWN OF ORGANIC MATTER IN AEROBIC AND ANAEROBIC
ENVIRONMENTS BACTERIAL ADAPTATIONS TO LOW-NUTRIENT ENVIRONMENTS 6.8
BACTERIA AND INORGANIC CYCLES BACTERIAL METABOLISM AND THE SULPHUR CYCLE
D. BACTERIAL POPULATIONS AND PRODUCTIVITY 6.9 6.10 BACTERIAL POPULATIONS
6.9.1 6.9.2 BACTERIAL PRODUCTIVITY 6.10.1 MEASUREMENT OF PRODUCTIVITY
6.10.2 6.10.3 6.10.4 6.10.5 TECHNIQUES FOR COUNTING BACTERIAL
POPULATIONS BIOLOGICAL SIGNIFICANCE OF TOTAL AND VIABLE COUNTS
REGULATION OF BACTERIAL POPULATIONS AND BIOMASS PRIMARY AND SECONDARY
PRODUCTIVITY: CORRELATION BETWEEN BACTERIAL AND ALGAL POPULATIONS
PRIMARY AND SECONDARY PRODUCTIVITY: THE ROLE OF DISSOLVED ORGANIC CARBON
BACTERIAL PRODUCTIVITY AND AQUATIC FOOD WEBS E. BACTERIAL COMMUNITIES IN
THE LOTIC ENVIRONMENT 6.11 BACTERIAL BIOFILMS 6.1 1.1 6.1 1.2 CASE STUDY
6.4 THE DEVELOPMENT OF BIOFILMS DYNAMIC INTERACTIONS IN THE
ESTABLISHMENT OF BIOFILMS: THE ROLE OF BACTERIAL CO-AGGREGATION SPECIFIC
RECOGNITION AND ADHESION AMONGST AQUATIC BIOFILM BACTERIA E BACTERIAL
INTERACTIONS WITH PHYTOPLANKTON INTERACTIONS BETWEEN PHYTOPLANKTON AND
PLANKTONIC BACTERIA 6.12.1 COMPETITION FOR INORGANIC NUTRIENTS 6.12.2
6.12 ANTAGONISTIC INTERACTIONS BETWEEN BACTERIA AND ALGAE 292 293 293
294 294 294 295 296 297 297 300 300 300 300 301 301 302 303 304 304 304
304 305 310 312 312 3 12 314 314 3 15 316 316 316 317 318 318 319 320
321 323 324 324 324 326 326 328 328 328 329 CONTENTS 6.13 EPIPHYTIC
ASSOCIATIONS OF BACTERIA WITH PHYTOPLANKTON 6.13.1 BACTERIA WITHIN THE
PHYCOSPHERE 6.13.2 OBSERVATION AND ENUMERATION OF EPIPHYTIC BACTERIA
SPECIFIC ASSOCIATIONS BETWEEN BACTERIA AND BLUE-GREEN ALGAE 7 VIRUSES:
MAJOR PARASITES IN THE FRESHWATER ENVIRONMENT 7.1 7.2 7.3 7.4 7.5 7.6
7.7 7.8 VIRUSES AS FRESHWATER BIOTA 7.1.1 GENERAL ROLE IN THE FRESHWATER
ENVIRONMENT 7.1.2 MAJOR GROUPS AND TAXONOMY OF FRESHWATER VIRUSES THE
VIRUS LIFE CYCLE: INTRACELLULAR AND FREE VIRAL STATES 7.2.1 SIGNIFICANCE
OF THE LYSOGENIC STATE DETECTION AND QUANTITATION OF FRESHWATER VIRUSES
7.3.1 FREE PARTICULATE VIRUSES 7.3.2 INFECTED HOST CELLS THE GROWTH AND
CONTROL OF VIRAL POPULATIONS 7.4.1 VIRUS PRODUCTIVITY 7.4.2 REGULATION
OF VIRAL ABUNDANCE CONTROL OF HOST POPULATIONS BY AQUATIC VIRUSES:
IMPACT ON THE MICROBIAL FOOD WEB 7.5 METABOLIC EFFECTS OF VIRUSES:
REDUCTION OF ALGAL PRIMARY PRODUCTIVITY 7.5.2 DESTRUCTION OF ALGAL AND
BACTERIAL POPULATIONS 7.5.3 VIRUSES AND THE MICROBIAL LOOP CYANOPHAGES:
VIRUSES OF BLUE-GREEN ALGAE 7.6.1 CLASSIFICATION AND TAXONOMIC
CHARACTERISTICS 7.6.2 INFECTION OF HOST CELLS PHYCOVIRUSES: PARASITES OF
EUKARYOTE ALGAE 7.7.1 GENERAL CHARACTERISTICS 7.7.2 HOST CELL INFECTION
CASE STUDY 7.1 7.7.3 ECOLOGICAL IMPACT OF PHYCOVIRUSES VIRUS INFECTION
OF FRESHWATER BACTERIA 7.8.2 7.8.3 7.8.4 INCIDENCE OF BACTERIAL
INFECTION 7.8.5 7.8.6 CASE STUDY 7.2 7.8.7 CASE STUDY 7.3 PSEUDOMONAS
AERUGINOSA THE INFECTIVE LIFE CYCLE OF CHLOROVIRUS GENERAL ROLE OF
BACTERIOPHAGES IN THE BIOLOGY OF FRESHWATER BACTERIA BACTERIOPHAGES IN
PELAGIC AND BENTHIC SYSTEMS OCCURRENCE OF FREE BACTERIOPHAGES IN AQUATIC
SYSTEMS TEMPERATE/VIRULENT PHAGE EQUILIBRIUM AND BACTERIAL SURVIVAL
BACTERIOPHAGE CONTROL OF PLANKTONIC BACTERIAL POPULATIONS VIRAL LYSIS OF
BACTERIA IN A EUTROPHIC LAKE TRANSDUCTION: BACTERIOPHAGE-MEDIATED GENE
TRANSFER BETWEEN FRESHWATER BACTERIA TRANSDUCTION OF PLASMID AND
CHROMOSOMAL DNA IN 8 FUNGI AND FUNGAL-LIKE ORGANISMS: AQUATIC BIOTA WITH
A MYCELIAL GROWTH FORM A. ACTINOMYCETES, OOMYCETES, AND TRUE FUNGI 8.1
FUNGI AND FUNGAL-LIKE ORGANISMS: THE MYCELIAL GROWTH HABIT 8.2
ACTINOMYCETES 8.2.1 TAXONOMIC CHARACTERISTICS 8.2.2 HABITAT 8.2.3
NUTRITION 8.2.4 COMPETITION WITH OTHER MICROORGANISMS 8.3.1 OOMYCETES
AND TRUE FUNGI 8.3 OOMYCETES 332 333 334 336 339 339 339 340 340 34 342
342 345 345 345 346 349 349 350 350 35 1 351 352 354 354 356 356 359 360
360 360 36 1 36 1 363 365 365 367 368 371 37 1 37 1 372 372 373 374 374
374 375 CONTENTS 8.3.2 TAXONOMIC DIVERSITY 8.4 TRUE FUNGI 8.4.1 OLD AND
NEW TERMINOLOGY 8.4.2 TAXONOMIC DIVERSITY WITHIN THE TRUE FUNGI B. FUNGI
AS SAPROPHYTES AND PARASITES 8.5 8.6 8.7 SAPROPHYTIC ACTIVITY OF FUNGI
8.5.1 8.5.2 BREAKDOWN OF LEAF LITTER 8.5.3 PARASITIC ACTIVITIES OF
AQUATIC FUNGI 8.6.1 8.6.2 FUNGAL EPIDEMICS IN THE CONTROL OF
PHYTOPLANKTON POPULATIONS 8.7.1 ECOLOGICAL SIGNIFICANCE COLONIZATION,
GROWTH, AND FUNGAL SUCCESSION SAPROPHYTIC FUNGI - CHYTRIDS AND
DEUTEROMYCETES PARASITIC AND PREDATORY DEUTEROMYCETES: FUNGI THAT ATTACK
SMALL ANIMALS PARASITIC CHYTRIDS: HIGHLY SPECIALIZED PARASITES OF
FRESHWATER ORGANISMS CASE STUDY 8.1 AUTUMN DIATOM BLOOM CHYTRID
INFECTION OF THE ASTERIONELLA DURING AN 8.7.2 8.7.3 NET EFFECT OF
INFECTED AND NON-INFECTED HOST CELLS FACTORS AFFECTING THE DEVELOPMENT
OF FUNGAL INFECTION 9 GRAZING ACTIVITIES IN THE FRESHWATER ENVIRONMENT:
THE ROLE OF PROTOZOA AND INVERTEBRATES A. PROTOZOA 9.1 9.2 9.3 9.4 9.5
9.6 INTRODUCTION 9.1.1 9.1.2 ECOLOGICAL ROLE OF PROTOZOA PROTOZOA,
ALGAE, AND INDETERMINATE GROUPS TAXONOMIC DIVERSITY OF PROTOZOA IN THE
FRESHWATER ENVIRONMENT 9.3.1 CILIATES 9.3.2 FLAGELLATE PROTOZOA 9.3.3
AMOEBOID PROTOZOA ECOLOGICAL IMPACT OF PROTOZOA: THE PELAGIC ENVIRONMENT
9.4.1 POSITIONING WITHIN THE WATER COLUMN 9.4.2 TROPHIC INTERACTIONS IN
THE WATER COLUMN HETEROTROPHIC NANOFLAGELLATES: AN INTEGRAL COMPONENT OF
PLANKTONIC COMMUNITIES 9.5.1 ENUMERATION OF NANOFLAGELLATE POPULATIONS
IN AQUATIC SAMPLES 9.5.2 TAXONOMIC COMPOSITION OF HNF COMMUNITIES
ABUNDANCE AND CONTROL OF FLAGELLATE POPULATIONS 9.5.4 NANOFLAGELLATE
GRAZING RATES AND CONTROL OF BACTERIAL POPULATIONS 9.5.5 CO-DISTRIBUTION
OF BACTERIA AND PROTOZOA WITHIN THE WATER COLUMN ECOLOGICAL IMPACT OF
PROTOZOA: THE BENTHIC ENVIRONMENT 9.6.1 BENTHIC MICROENVIRONMENTS 9.6.2
SEASONAL CHANGES 9.6.3 ORGANIC POLLUTION 9.6.4 SEWAGE-TREATMENT PLANTS:
ACTIVATED SLUDGE RELATIVE IMPORTANCE OF PROTOZOANS, ROTIFERS, AND
CRUSTACEANS IN PELAGIC COMMUNITIES B. GRAZING OF MICROBIAL POPULATIONS
BY ZOOPLANKTON 9.7 GENERAL FEATURES OF ZOOPLANKTON: ROTIFERS,
CLADOCERANS AND COPEPODS 9.7.1 MORPHOLOGY AND SIZE 9.7.2 REPRODUCTION
AND GENERATION TIMES 9.7.3 PREDATION OF ZOOPLANKTON GRAZING ACTIVITY AND
PREY SELECTION 9.8.1 9.8 SEASONAL SUCCESSION IN ZOOPLANKTON FEEDING 376
377 377 378 381 381 382 383 386 388 388 389 392 392 392 394 395 40 1 401
40 1 402 402 403 403 407 409 412 412 413 413 414 415 415 416 418 419 419
42 1 42 422 423 423 423 426 426 427 421 CONTENTS 9.8.2 METHOD OF FEEDING
9.9 GRAZING RATES OF ZOOPLANKTON 9.9.1 MEASUREMENT 9.9.2 FACTORS
AFFECTING GRAZING RATES 9.9.3 EFFECTS OF ALGAL TOXINS ON ZOOPLANKTON
BIOMASS RELATIONSHIPS BETWEEN PHYTOPLANKTON AND ZOOPLANKTON POPULATIONS
9.1 1.1 9.1 1.2 BIOMASS TRANSFER SELECTION OF FOOD BY ZOOPLANKTON
DIURNAL VARIATIONS IN GRAZING ACTIVITY 9.10 9.1 1 CONTROL OF ZOOPLANKTON
POPULATIONS C. GRAZING OF BENTHIC MICROORGANISMS COMPARISON OF PELAGIC
AND BENTHIC SYSTEMS ROLE OF INVERTEBRATES IN CONSUMING RIVER
MICROORGANISMS 9.13.1 GRAZING OF PERIPHYTON BIOMASS 9.13.2 9.12 9.13
EFFECTS OF GRAZING ON PERIPHYTON COMMUNITY STRUCTURE 10 EUTROPHICATION:
THE MICROBIAL RESPONSE TO HIGH NUTRIENT LEVELS A. ORIGINS OF
EUTROPHICATION 10.1 NUTRIENT STATUS OF FRESHWATER ENVIRONMENTS: FROM
OLIGOTROPHIC TO EUTROPHIC SYSTEMS 10.1.1 10.1.2 10.1.3 10.1.4 EUTROPHIC
AND OLIGOTROPHIC LAKES: DEFINITION OF TERMS DETERMINANTS OF TROPHIC
STATUS: LOCATION, MORPHOLOGY AND HYDROLOGY ARTIFICIAL EUTROPHICATION:
THE IMPACT OF HUMAN ACTIVITIES EUTROPHICATION OF RIVERS AND STREAMS B.
ECOLOGICAL EFFECTS OF EUTROPHICATION IN STANDING WATERS 10.2 GENERAL
BIOLOGICAL CHANGES 10.2.1 10.2.2 10.2.3 BIOLOGICAL ASSESSMENT OF WATER
QUALITY 10.3.1 ALGAL INDICATOR GROUPS CASE STUDY 10.1 EUTROPHICATION IN
LAKE TAHOE (USA) 10.3.2 INDICES OF SPECIES DIVERSITY PROBLEMS WITH
INTENTIONAL EUTROPHICATION: DESTABILIZATION OF FISHPOND ECOSYSTEMS
10.4.1 10.4.2 THE PROGRESSION FROM OLIGOTROPHIC TO EUTROPHIC WATERS
EFFECTS OF EUTROPHICATION ON THE WATER COLUMN OF STRATIFIED LAKES MAJOR
CHANGES IN ECOLOGICAL BALANCE: THE BREAKDOWN OF HOMEOSTASIS 10.3 USING
THE A/C (ARAPHID PENNATE/CENTRIC) DIATOM RATIO TO ASSESS 10.4 PROMOTION
OF HIGH PRODUCTIVITY IN FISHPONDS DESTABILIZATION AND RESTORATION OF THE
ECOSYSTEM C. THE GROWTH AND IMPACT OF ALGAL BLOOMS 10.5 ALGAL BLOOMS AND
EUTROPHICATION 10.6 FORMATION OF COLONIAL BLUE-GREEN ALGAL BLOOMS 10.6.1
10.6.2 COMPETITION WITH OTHER ALGAE CASE STUDY 10.2 BLUE-GREEN DOMINANCE
ENVIRONMENTAL EFFECTS OF BLUE-GREEN BLOOMS 10.7.1 GENERAL ENVIRONMENTAL
CHANGES 10.7.2 10.7.3 PRODUCTION OF TOXINS GENERAL REQUIREMENTS FOR
BLOOM FORMATION USE OF ENCLOSURE EXPERIMENTS TO STUDY FACTORS AFFECTING
10.7 SPECIFIC EFFECTS ON WATER QUALITY 429 429 432 432 433 434 435 437
437 437 438 43 8 440 440 44 1 444 444 444 445 446 446 448 448 448 452
452 45 3 45 3 454 455 455 455 456 451 451 459 459 459 46 1 46 1 46 1 462
462 CONTENTS D. CONTROL OF BLUE-GREEN ALGAE 10.8 10.9 STRATEGIES FOR THE
CONTROL OF BLUE-GREEN ALGAE NUTRIENT LIMITATION (BOTTOM-UP CONTROL) CASE
STUDY 10.3 10.8.2 DIRECT ERADICATION 10.8.3 CASE STUDY 10.4 THE BROADS
WETLAND AREA (UK) BIOLOGICAL CONTROL OF BLUE-GREEN ALGAE 10.9.1
BIOLOGICAL CONTROL AGENTS 10.9.2 CASE STUDY 10.5 10.9.3 RESTORATION OF
WATER QUALITY IN LAKE WASHINGTON, NORTH WEST USA TOP-DOWN CONTROL OF
BLUE-GREEN ALGAE: THE USE OF BIOMANIPULATION TOP-DOWN AND BOTTOM-UP
CONTROL OF ALGAL POPULATIONS IN PROTOCOL FOR THE DEVELOPMENT OF
BIOLOGICAL CONTROL AGENTS APPLICATION OF PLANT LITTER TO CONTROL
BLUE-GREEN ALGAE POTENTIAL PROTOZOON CONTROL AGENTS 10.10 STRATEGIES FOR
THE CONTROL OF BLUE-GREEN ALGAE IN DIFFERENT WATER BODIES 10.10.1
INTEGRATED MANAGEMENT POLICY CASE STUDY 10.6 GREATER MANCHESTER (UK)
10.10.2 SPECIFIC REMEDIAL MEASURES IN DIFFERENT FRESHWATER SYSTEMS
ENVIRONMENTAL MONITORING AT HOLLINGWORTH LAKE, GLOSSARY REFERENCES INDEX
464 464 465 466 466 467 467 47 1 472 474 475 475 477 477 479 48 1 483
495 517
|
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| callnumber-raw | QR105.5 |
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| callnumber-sort | QR 3105.5 |
| callnumber-subject | QR - Microbiology |
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| ctrlnum | (OCoLC)56591129 (DE-599)BVBBV019758321 |
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| dewey-ones | 579 - Microorganisms, fungi & algae |
| dewey-raw | 579/.176 |
| dewey-search | 579/.176 |
| dewey-sort | 3579 3176 |
| dewey-tens | 570 - Biology |
| discipline | Biologie |
| format | Book |
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| id | DE-604.BV019758321 |
| illustrated | Illustrated |
| indexdate | 2024-07-09T20:05:27Z |
| institution | BVB |
| isbn | 0471485284 0471485292 |
| language | English |
| lccn | 2004021738 |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-013084718 |
| oclc_num | 56591129 |
| open_access_boolean | |
| owner | DE-703 DE-M49 DE-BY-TUM DE-634 |
| owner_facet | DE-703 DE-M49 DE-BY-TUM DE-634 |
| physical | XVIII, 524 S. graph. Darst., Kt. cm |
| publishDate | 2005 |
| publishDateSearch | 2005 |
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| publisher | Wiley |
| record_format | marc |
| spelling | Sigee, David C. Verfasser aut Freshwater microbiology biodiversity and dynamic interactions of microorganisms in the aquatic environment David C. Sigee Hoboken, NJ Wiley 2005 XVIII, 524 S. graph. Darst., Kt. cm txt rdacontent n rdamedia nc rdacarrier Includes bibliographical references and index Microbiologie d'eau douce aFreshwater microbiology aFresh Water xmicrobiology Mikrobiologie (DE-588)4316357-9 gnd rswk-swf Süßwasser (DE-588)4058507-4 gnd rswk-swf Süßwasser (DE-588)4058507-4 s Mikrobiologie (DE-588)4316357-9 s DE-604 http://www.loc.gov/catdir/toc/ecip051/2004021738.html Table of contents HEBIS Datenaustausch Darmstadt application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=013084718&sequence=000003&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Sigee, David C. Freshwater microbiology biodiversity and dynamic interactions of microorganisms in the aquatic environment Microbiologie d'eau douce aFreshwater microbiology aFresh Water xmicrobiology Mikrobiologie (DE-588)4316357-9 gnd Süßwasser (DE-588)4058507-4 gnd |
| subject_GND | (DE-588)4316357-9 (DE-588)4058507-4 |
| title | Freshwater microbiology biodiversity and dynamic interactions of microorganisms in the aquatic environment |
| title_auth | Freshwater microbiology biodiversity and dynamic interactions of microorganisms in the aquatic environment |
| title_exact_search | Freshwater microbiology biodiversity and dynamic interactions of microorganisms in the aquatic environment |
| title_full | Freshwater microbiology biodiversity and dynamic interactions of microorganisms in the aquatic environment David C. Sigee |
| title_fullStr | Freshwater microbiology biodiversity and dynamic interactions of microorganisms in the aquatic environment David C. Sigee |
| title_full_unstemmed | Freshwater microbiology biodiversity and dynamic interactions of microorganisms in the aquatic environment David C. Sigee |
| title_short | Freshwater microbiology |
| title_sort | freshwater microbiology biodiversity and dynamic interactions of microorganisms in the aquatic environment |
| title_sub | biodiversity and dynamic interactions of microorganisms in the aquatic environment |
| topic | Microbiologie d'eau douce aFreshwater microbiology aFresh Water xmicrobiology Mikrobiologie (DE-588)4316357-9 gnd Süßwasser (DE-588)4058507-4 gnd |
| topic_facet | Microbiologie d'eau douce aFreshwater microbiology aFresh Water xmicrobiology Mikrobiologie Süßwasser |
| url | http://www.loc.gov/catdir/toc/ecip051/2004021738.html http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=013084718&sequence=000003&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
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