Bacterial artificial chromosomes: 2 Functional studies
Gespeichert in:
| Format: | Buch |
|---|---|
| Sprache: | English |
| Veröffentlicht: |
Totowa, N. J.
Humana Press
2004
|
| Schriftenreihe: | Methods in molecular biology
256 |
| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | XVIII,323 S. Ill., graph. Darst. |
| ISBN: | 0896039897 |
Internformat
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Datensatz im Suchindex
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|---|---|
| adam_text | Contents of Volume 2
Functional Studies
Preface v
Contents of the Companion Volume xi
Contributors xiii
1 Use of BAC End Sequences for SNP Discovery
Michael M. Weil, Rashmi Pershad, Ruoping Wang,
and Sheng Zhao /
2 Exon Trapping for Positional Cloning and Fingerprinting
Scott E. Wenderfer and John J. Monaco 7
3 Isolation of CpG Islands From BAC Clones
Using a Methyl CpG Binding Column
Sally H. Cross 21
4 BAC Microarray Based Comparative Genomic Hybridization
Antoine M. Snijders, Richard Segraves, Stephanie Blackwood,
Daniel Pinkel, and Donna G. Albertson 39
5 Large DNA Transformation in Plants
Sangdun Choi 57
6 Retrofitting BACs With a Selectable Marker for Transfection
Zunde Wang, Angelika Longacre, and Peter Engler 69
7 BAC Modification Using a RecA Expressing
Shuttle Vector System
Nathan Mise and Philip Avner 77
8 Bacterial Artificial Chromosome Engineering
Srividya Swaminathan and Shyam K. Sharan 89
9 ET Recombination: DNA Engineering Using Homologous
Recombination in E. coli
foep P. P. Muyrers, Youming Zhang, Vladmir Benes,
Giuseppe Testa, Jeanette M. J. Rientjes,
and A. Francis Stewart 107
ix
x Contents
10 BAC Engineering for the Generation of ES Cell Targeting
Constructs and Mouse Transgenes
Giuseppe Testa, Kristina Vintersten, Youming Zhang,
Vladmir Benes, Joep P. P. Muyrers,
and A. Francis Stewart 123
11 Microinjection of BAC DNA into the Pronuclei
of Fertilized Mouse Oocytes
Kristina Vintersten, Giuseppe Testa, and A. Francis Stewart 141
12 Generation of BAC Transgenic Mice
Vikki M. Marshall, Janette Allison, Tanya Templeton,
and Simon J. Foote 159
13 BAC Rescue: A Tool for Functional Analysis of the Mouse Genome
Deborah A. Swing and Shyam K. Sharan 183
14 Herpesviruses: A Brief Overview
Mathias Ackermann 199
15 Cloning of P Herpesvirus Genomes
as Bacterial Artificial Chromosomes
Fva Maria Borst, Irena Crnkovic Mertens,
and Martin Messerle 221
16 Construction of HSV 1 BACs and Their Use for Packaging
of HSV 1 Based Amplicon Vectors
Thomas G. H. Heister, Andrea Vogtlin, Lars Muller, Irma Heid,
and Cornel Fraefel 241
1 7 Mutagenesis of Viral BACs With Linear PCR Fragments
(ET Recombination)
Markus Wagner and Ulrich H. Koszinowski 257
18 Mutagenesis of Herpesvirus BACs by Allele Replacement
Fva Maria Borst, Gybrgy Posfai, Frank Pogoda,
and Martin Messerle 269
19 Herpesvirus Genome Mutagenesis
by Transposon Mediated Strategies
Alistair McGregor and Mark R. Schleiss 281
20 Protective DNA Vaccination by Particle Bombardment Using
BAC DNA Containing a Replication Competent,
Packaging Defective Genome of Herpes Simplex Virus Type I
Mark Suter and Hans Peter Hefti 303
Index 309
Contents of the Companion Volume
Volume 1: Library Construction, Physical Mapping, and Sequencing
1 BAC Library Construction
Kazutoyo Osoegawa and Pieter J. de Jong
2 Construction of Small Genome BAC Library for Functional
and Genomic Applications
David Smajs, Steven J. Norris, and George M. Weinstock
3 Preparation of BAC Libraries From Bacterial Genomes
by In Vitro Packaging
Sangita Pal, Solida Mak, and George M. Weinstock
4 Exploring Transformation Associated Recombination Cloning
for Selective Isolation of Genomic Regions
Natalay Kouprina, Vladimir N. Noskov, Maxim Koriabine,
Sun Hee Leem, and Vladimir Larionov
5 Purification of BAC DNA
Tim S. Poulsen
6 Hybridization Based Selection of BAC Clones
Chang Su Lim and ling fin Kim
7 Applications of Interspersed Repeat Sequence Polymerase Chain Reaction
Heike Zimdahl, Claudia Gosele, Thomas Kreitler, and Margit Knoblauch
8 BAC Mapping Using Fluorescence In Situ Hybridization
Xiao Ning Chen and Julie R. Korenberg
9 High Throughput BAC Fingerprinting
Jacqueline Schein, Tamara Kucaba, Mandeep Sekhon, Duane Smailus,
Robert Waterston, and Marco Marra
10 BAC End Sequencing
Tim S. Poulsen and Hans E. Johnsen
11 Radiation Hybrid Mapping With BAC Ends
Michael Olivier, Shannon Brady, and David R. Cox
12 Shotgun Library Construction for DNA Sequencing
Bruce A. Roe
1 3 Rolling Circle Amplification for Sequencing Templates
Paul F. Predki, Chris Elkin, Hitesh Kapur, Jamie Jett,
Susan Lucas, Tijana Glavina, and Trevor Hawkins
xi
xii Contents of the Companion Volume
14 Transposon Mediated Sequencing
Rachel Reeg and Anup Madan
15 Pyrosequencing: A Tool for DNA Sequencing Analysis
Elahe Elahi and Mostafa Ronaghi
16 Use of Fimers to Eliminate Polymerase Chain Reaction
and Primer Dimer Artifacts and to Increase Yield
in BAC Sequencing Reactions
Andrei Malykh, Nikolai Polushin, Alexei Slesarev, and Sergei Kozyavkin
17 Retrofitting BACs and PACs With LoxP Transposons
to Generate Nested Deletions
Pradeep K. Chatterjee
18 Preparing Nested Deletion Template DNA for Field Inversion
Gel Electrophoresis Analyses and Position Specific End Sequencing
With Transposon Primers
Pradeep K. Chatterjee and Joseph C. Baker, Jr.
19 BAC Finishing Strategies
Christine Bird and Darren Grafham
20 Using the TIGR Assembler in Shotgun Sequencing Projects
Mihai Pop and Dan Kosack
21 Finishing Working Draft BAC Projects by Directed Sequencing
With ThermoFidelase and Fimers
Andrei Malykh, Olga Malykh, Nikolai Polushin, Sergei Kozyavkin,
and Alexei Slesarev
22 Optimized Multiplex Polymerase Chain Reaction: An Effective Method
for Rapid Gap Closure
Diana Radune and Herve Tettelin
23 Assembly of DNA Sequencing Data
Jeremy Schmutz, Jane Grimwood, and Richard M. Myers
24 Sequence Finishing
Jeremy Schmutz, Jane Grimwood, and Richard M. Myers
25 Quality Assessment of Finished BAC Sequences
Jeremy Schmutz, Jane Grimwood, and Richard M. Myers
|
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| id | DE-604.BV019366315 |
| illustrated | Illustrated |
| indexdate | 2024-07-09T19:58:37Z |
| institution | BVB |
| isbn | 0896039897 |
| language | English |
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| physical | XVIII,323 S. Ill., graph. Darst. |
| publishDate | 2004 |
| publishDateSearch | 2004 |
| publishDateSort | 2004 |
| publisher | Humana Press |
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| series | Methods in molecular biology |
| series2 | Methods in molecular biology |
| spelling | Bacterial artificial chromosomes 2 Functional studies Ed. by Shaying Zhao ... Totowa, N. J. Humana Press 2004 XVIII,323 S. Ill., graph. Darst. txt rdacontent n rdamedia nc rdacarrier Methods in molecular biology 256 Methods in molecular biology ... Bakterien (DE-588)4004296-0 gnd rswk-swf Künstliches Chromosom (DE-588)4767094-0 gnd rswk-swf Labortechnik (DE-588)4123602-6 gnd rswk-swf Bakterien (DE-588)4004296-0 s Künstliches Chromosom (DE-588)4767094-0 s Labortechnik (DE-588)4123602-6 s DE-604 Zhao, Shaying Sonstige oth (DE-604)BV019366253 2 Methods in molecular biology 256 (DE-604)BV035362695 256 HBZ Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=012829916&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Bacterial artificial chromosomes Methods in molecular biology Bakterien (DE-588)4004296-0 gnd Künstliches Chromosom (DE-588)4767094-0 gnd Labortechnik (DE-588)4123602-6 gnd |
| subject_GND | (DE-588)4004296-0 (DE-588)4767094-0 (DE-588)4123602-6 |
| title | Bacterial artificial chromosomes |
| title_auth | Bacterial artificial chromosomes |
| title_exact_search | Bacterial artificial chromosomes |
| title_full | Bacterial artificial chromosomes 2 Functional studies Ed. by Shaying Zhao ... |
| title_fullStr | Bacterial artificial chromosomes 2 Functional studies Ed. by Shaying Zhao ... |
| title_full_unstemmed | Bacterial artificial chromosomes 2 Functional studies Ed. by Shaying Zhao ... |
| title_short | Bacterial artificial chromosomes |
| title_sort | bacterial artificial chromosomes functional studies |
| topic | Bakterien (DE-588)4004296-0 gnd Künstliches Chromosom (DE-588)4767094-0 gnd Labortechnik (DE-588)4123602-6 gnd |
| topic_facet | Bakterien Künstliches Chromosom Labortechnik |
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