Plant molecular breeding:
Gespeichert in:
| Format: | Buch |
|---|---|
| Sprache: | English |
| Veröffentlicht: |
Oxford [u.a.]
Blackwell Publ.
2003
Boca Raton [u.a.] CRC Pr. |
| Ausgabe: | 1. publ. |
| Schriftenreihe: | Biological sciences series
|
| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | XIV, 265 S. graph. Darst. |
| ISBN: | 184127321X 0849328136 |
Internformat
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| 245 | 1 | 0 | |a Plant molecular breeding |c ed. by H. John Newbury |
| 250 | |a 1. publ. | ||
| 264 | 1 | |a Oxford [u.a.] |b Blackwell Publ. |c 2003 | |
| 264 | 1 | |a Boca Raton [u.a.] |b CRC Pr. | |
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Datensatz im Suchindex
| _version_ | 1804130558834376704 |
|---|---|
| adam_text | Titel: Plant molecular breeding
Autor: Newbury, H. John
Jahr: 2003
Contents
Contributors xi
Preface xiii
1 Mapping, characterization and deployment of quantitative trait loci 1
MICHAEL J. KEARSEY AND ZEWEIW. LUO
1.1 Introduction I
1.2 Genetic basis of quantitative trait performance 2
1.3 Basic modelling of quantitative traits 3
1.4 Statistical principles and methods for mapping QTL 5
1.4.1 Molecular markers for QTL mapping 6
1.4.2 QTL mapping in segregating populations 8
1.4.3 QTL mapping in pedigree populations 13
1.4.4 QTL analysis in natural populations 14
1.4.4.1 Analysis of variance under an unbalanced nested design 16
1.4.4.2 Regression analysis 17
1.4.4.3 Likelihood analysis 17
1.5 The application of QTL theory 20
1.5.1 Advanced segregating populations 20
1.5.2 Part chromosome substitution lines (backcross introgression lines)
and near-isogenic lines (NILs) 21
1.5.3 PartCSLs 22
1.5.4 NILs 22
1.5.5 STAIRS 24
1.5.6 Cloning QTL 24
1.6 Conclusion 25
References 25
2 Marker-assisted breeding 30
FREDERIC HOSPITAL
2.1 Introduction 30
2.2 Marker-assisted backcrossing of a single target gene 31
2.2.1 Foreground selection 32
2.2.1.1 Target locus is a known locus 32
2.2.1.2 Target locus is a quantitative trait locus (QTL) 35
2.2.1.3 Minimal population sizes 36
2.2.2 Background selection 37
2.2.2.1 Expected genome contents with no selection 38
2.2.2.2 Marker-based estimate of recipient genome content 40
2.2.2.3 Reduction of linkage drag (carrier chromosome) 40
CONTENTS
2.2.2.4 Selection on non-carrier chromosomes 45
2.2.2.5 Example of efficiency for a complete scheme 46
2.3 Genotype building strategies for multiple target genes 48
2.3.1 Marker-based population screening 48
2.3.2 Marker-based recurrent selection 48
2.3.3 Marker-based gene pyramiding 49
2.3.4 Marker-assisted backcrossing for several target genes 49
2.4 Selection combining molecular and phenotypic information 50
2.4.1 The marker-phenotype index 51
2.5 Selection for hybrid performance 52
2.6 Experimental results 52
2.7 Conclusions 55
References 56
Genomic colinearity and its application in crop plant improvement 60
H. JOHN NEWBURY AND ANDY H. PATERSON
3.1 Introduction 60
3.2 A historical perspective 60
3.3 Examples of synteny between plant groups 61
3.3.1 The Brassicaceae 61
3.3.2 The Fabaceae 64
3.3.3 The Poaceae 66
3.4 The limits to colinearity 68
3.5 How can synteny be exploited by those attempting to improve plants? 69
3.5.1 Disease resistance 70
3.5.2 Flowering time 72
3.5.3 Plant height 74
3.6 Conclusion 75
References 76
Plant genetic engineering 82
IAN PUDDEPHAT
4.1 Background 82
4.1.1 Key components of plant genetic engineering 84
4.1.2 Methods for plant transformation 85
4.2 Agrobacterium-medialed transformation 86
4.2.1 Agrobacterium rhizogenes 89
4.2.2 Monocot transformation 91
4.2.3 Vectors for Agrvbacterium-med iated transformation 93
4.2.3.1 Integrative vectors 93
4.2.3.2 Binary vectors 94
4.3 Direct DNA delivery 96
4.3.1 Particle bombardment 96
4.3.2 Protoplasts 97
4.3.3 Alternative methods for direct gene transfer 99
4.4 Perspectives 99
4.5 Alternative approaches to plant genetic engineering 100
4.5.1 In-planta technologies 100
4.5.2 Plastids 104
4.6 Selection of transformation events 107
CONTENTS
4.7 Marker-free transformation 109
4.7.1 Co-transformation 110
4.7.2 Site-specific recombination 112
4.7.3 Transposable elements 113
4.7.4 Perspectives 113
4.8 Prospects for improving the efficiency of transformation 113
4.8.1 Genotypic variation for plant transformation 114
4.8.2 Interaction of plant genes with the processes of transformation 116
4.8.2.1 Cell attachment 116
4.8.2.2 Transfer and targeting 116
4.8.2.3 T-DNA integration 117
4.9 Conclusions 119
References 120
5 Plant germplasm collections as sources of useful genes 134
IAN GODWIN
5.1 Introduction 134
5.1.1 Germplasm collections as museums 134
5.1.2 The evolution and domestication of crop species 134
5.2 The concept of gene pools 135
5.2.1 The classical model 135
5.2.2 Beyond the tertiary gene pool 136
5.3 Molecular genetics and genomics 137
5.3.1 RFLP markers 137
5.3.2 PCR-based markers 138
5.4 Plant germplasm collections 138
5.4.1 Collection issues: centres of diversity 138
5.4.1.1 Identification of phylogenetic relationships 139
5.4.2 Management and conservation: rationalization and core collections 139
5.4.3 Utilization requires some sort of screening 141
5.5 The challenge for plant breeding: utilization 142
5.5.1 Exploiting the primary gene pool 143
5.5.2 Exploiting the secondary gene pool 143
5.5.3 Beyond the secondary gene pool: how can barriers be broken down? 144
5.5.3.1 Diploid progenitors 144
5.6 Modern techniques: genomics meets bioinformatics 145
5.6.1 Better description and measurement of diversity 145
5.6.2 Better screening of variation for a trait 146
5.6.3 Better management of data: dynamic data sets 146
5.7 Beyond the gene pool: redesigning agricultural species with germplasm utilization 147
References 148
6 The impact of plant genomics on maize improvement 152
DONAL M. O SULLIVAN AND KEITH J. EDWARDS
6.1 Introduction 152
6.1.1 Origins and distribution of maize growing 153
6.1.1.1 Five small steps for breeding - one giant step for mankind 153
6.1.2 Food and industrial uses of maize 155
6.1.2.1 Popular maize-based foods 155
6.1.2.2 Industrial processing of maize 157
viii CONTENTS
6.1.2.3 Starch uses 158
6.1.2.4 Oil uses 159
6.1.2.5 Protein and fibre uses 159
6.2 Twentieth-century maize breeding 159
6.2.1 Germplasm resources 160
6.2.1.1 Gene banks 160
6.2.1.2 In-situ conservation 161
6.2.2 Breeding methods 161
6.2.2.1 Inbred lines and hybrid maize 161
6.2.2.2 Cytoplasmic male sterility 163
6.2.2.3 Molecular markers and marker-assisted selection 164
6.2.2.4 Candidate genes: the next generation of molecular markers 165
6.2.2.5 Foreground and background selection 166
6.2.3 Breeding targets 166
6.2.3.1 Example 1: Starch synthesis 167
6.2.3.2 Example 2: Quality protein maize (QPM) 167
6.2.3.3 Example 3: Chill tolerance 168
6.2.4 First-wave maize biotechnology 168
6.2.4.1 Bt maize 168
6.2.4.2 Herbicide-resistant maize 169
6.2.4.3 Engineered male-sterile maize 169
6.2.4.4 Production of GM maize 169
6.3 Maize genomics in the twenty-first century 170
6.3.1 Maize gene function discovery 171
6.3.1.1 Transcriptomics 171
6.3.1.2 Functional genomics 171
6.3.1.3 Genome sequencing/structural genomics 172
6.3.1.4 Evolutionary genomics 174
6.3.1.5 Bioinformatics 174
6.3.2 Comparative genomics 174
6.3.2.1 The grass genome 176
6.4 A new paradigm for molecular breeding of maize 177
References 179
7 Plant genomics and its impact on wheat breeding 184
JAMES A. ANDERSON
7.1 Introduction 184
7.2 Overview of genomics resources in wheat 184
7.2.1 Genetic stocks 185
7.2.2 Genetic and physical maps 186
7.2.3 Gene clustering and density 187
7.2.4 Synteny and comparative mapping 188
7.2.5 Sequence-based homology 189
7.2.6 Will rice genomics contribute to wheat improvement? 189
7.3 Gene cloning in wheat 190
7.3.1 Rhtl 191
7.3.2 CreS 191
7.3.3 Leaf rust (LrlO) 191
7.4 Transgenics 192
7.5 Applications/examples of DNA marker technology in wheat breeding 193
7.5.1 Assessing genetic diversity 193
CONTENTS
7.5.2 Marker-assisted selection (MAS) 194
7.5.2.1 DNA markers for disease resistance genes 195
7.5.2.2 Limitations to marker-assisted selection in wheat,
and possible solutions 199
7.5.2.3 Beyond MAS: direct allele selection 202
7.5.2.4 Retrospective breeding and MAS 204
7.5.2.5 MAS conclusions 205
Acknowledgements 205
References 206
8 Genomics and molecular breeding for root and tuber crop
improvement 216
M.W. BONIERBALE, R. SIMON, DP. ZHANG,
M. GHISLAIN, C. MBA AND X.-Q. LI
8.1 Root and tuber crop profile 216
8.2 The power of comparative mapping for R T crops 218
8.3 The ...ics technology to unravel R T gene networks 220
8.4 Gene transfer 222
8.5 Primary traits for R T crop improvement 223
8.5.1 Potato late blight disease; mapping and engineering progress 223
8.5.2 Contemporary approaches to durable resistance to potato late blight 228
8.5.2.1 Candidate gene associations with resistance in mapping populations 229
8.5.2.2 Use of functional marker loci (genes) to enhance comparative
mapping 230
8.5.2.3 Identification of up- and down-regulated genes as candidate
determinants of QTL 231
8.6 Molecular approaches to characterizing and improving carbohydrate metabolism
in R T crops 233
8.6.1 Molecular manipulation of starch functional properties through expression
of transgenes 234
8.6.2 Starch grain formation and morphology 234
8.6.3 Starch-sugar conversion 235
8.6.4 Starch content 236
8.6.5 Productivity and sink strength 237
8.6.6 Genomics contribution to the improvement of starch yields and quality
in R T crops 238
8.7 Future prospects 239
8.7.1 Carbohydrate trait improvement 240
8.7.2 Resistance breeding 240
8.7.3 High-throughput genotyping and association mapping 241
Acknowledgement 242
References 242
Index 255
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| illustrated | Illustrated |
| indexdate | 2024-07-09T19:22:57Z |
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| language | English |
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| series2 | Biological sciences series |
| spelling | Plant molecular breeding ed. by H. John Newbury 1. publ. Oxford [u.a.] Blackwell Publ. 2003 Boca Raton [u.a.] CRC Pr. XIV, 265 S. graph. Darst. txt rdacontent n rdamedia nc rdacarrier Biological sciences series Gentechnologie swd Molekulargenetik swd Pflanzen swd Pflanzenzüchtung swd Plant breeding Plant molecular genetics Newbury, H. John Sonstige oth HBZ Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=010732600&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Plant molecular breeding Gentechnologie swd Molekulargenetik swd Pflanzen swd Pflanzenzüchtung swd Plant breeding Plant molecular genetics |
| title | Plant molecular breeding |
| title_auth | Plant molecular breeding |
| title_exact_search | Plant molecular breeding |
| title_full | Plant molecular breeding ed. by H. John Newbury |
| title_fullStr | Plant molecular breeding ed. by H. John Newbury |
| title_full_unstemmed | Plant molecular breeding ed. by H. John Newbury |
| title_short | Plant molecular breeding |
| title_sort | plant molecular breeding |
| topic | Gentechnologie swd Molekulargenetik swd Pflanzen swd Pflanzenzüchtung swd Plant breeding Plant molecular genetics |
| topic_facet | Gentechnologie Molekulargenetik Pflanzen Pflanzenzüchtung Plant breeding Plant molecular genetics |
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