RECOMB 2001: proceedings of the Fifth Annual International Conference on Computational Biology ; April 22 - 25, 2001, Montreal, Canada
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| Corporate Author: | |
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| Format: | Conference Proceeding Book |
| Language: | English |
| Published: |
New York, NY
Assoc. for Computing Machinery
2001
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| Subjects: | |
| Online Access: | Inhaltsverzeichnis |
| Physical Description: | IX, 316 S. Ill., graph. Darst. |
| ISBN: | 1581133537 |
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Record in the Search Index
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| adam_text | Fifth Annual International Conference of
Computational Molecular Biology
(RECOMB
2001)
Montreal, Canada, April
22-25, 2001
Table of Contents
Foreword
.......................................................................................................
і
Committees
...................................................................................................
iii
Previous Meetings
.............................................................................................
v
Invited Presentation:
The Sequence of the Human Genome
Mark Adams
...................................................................................................1
A New Approach to Sequence Comparison: Normalized Sequence Alignment
Abdullah
N.
Arslan,
Ömer Egecioglu,
Pavel A. Pevzner
.........................................................2
Context-Specific Bayesian Clustering for Gene Expression Data
Yoseph Barash, Mr Friedman
.................................................................................12
An Optimal Procedure for Gap Closing in Whole Genome Shotgun Sequencing
Richard Beigel,
Noga
Alón,
Mehmet
Serkan Apaydin,
Lance Forinovi,
Simon
K asi f
.............................22
Class Discovery in Gene Expression Data
Amir Ben-Dor, Nir Friedman, Zohar Yakhini
..................................................................31
On the Predictive Power of Sequence Similarity in Yeast
Yonathan Bilu,
Michal
Liniai..................................................................................
39
Algorithms for Phylogenetic Footprinting
Mathieu Blanchette
............................................................................................49
Predicting The Beta-Helix Fold From Protein Sequence Data
Phil Bradley, Lenore Cowen, Matthew Menke, Jonathan King, Bonnie
Berger
..................................59
Invited Presentation:
Information processing by cells and biologists
Roger Brent
...................................................................................................68
Finding Motifs Using Random Projections
Jeremy Buhler, Martin
Tompa
.................................................................................69
Rapid Significance Estimation in Local Sequence Alignment With Gaps
Ralf Bundschuh...............................................................................................77
Regulatory Element Detection Using Correlation with Expression
Harmen
J.
Bussemaker, Hao Li, Eric D. Siggia
................................................................86
Gene-Finding Via Tandem Mass Spectrometry
Ting Chen
....................................................................................................87
Algorithms for Identifying Protein Cross-links Via Tandem Mass Spectrometry
Ting Chen, Jacob D. Jaffe, George M. Church
.................................................................95
Invited Presentation:
Hunger for new technologies, metrics, and
spatiotemporal
models in functional genomic
George M. Church
............................................................................................
103
Fast Recovery of Evolutionary Trees With Thousands of Nodes
Miklós
Csűrös
................................................................................................
104
Geometric Algorithms for the Analysis of
гО-ЕіесЇгоргюгезіз
Gels
Alon Efrat, Frank Hoffmann, Klaus
Kriegel,
Christof Schultz, Carola
Wenk
...................................114
Analysis Techniques for Microarray Time-Series Data
Vladimir Filkov, Steven Skiena, Jizu Zhi
.....................................................................124
A Structural EM Algorithm for Phylogenetic Inference
Mr Friedman,
Matan
Ninio, Itsik Pe er,
Tal Pupko...........................................................
132
Optimal Sequencing by Hybridization in Rounds
Alan Frieze, Bjarni V.
Halldórsson
...........................................................................141
Efficient Algorithms for Lateral Gene Transfer Problems
Michael
T. Hallett, Jens Lagergren
...........................................................................149
The Greedy Path-Merging Algorithm for Sequence Assembly
Daniel H. Huson,
Knut Reinert,
Gene Myers
.................................................................157
Extracting Structural Information Using Time-Frequency Analysis of Protein NMR Data
Christopher James Langmead, Bruce Randall Donald
.........................................................164
Separating Repeats in
DNA
Sequence Assembly
John Kececioglu,
Jun Yu
.....................................................................................176
A NMR-spectra-based Scoring Function for Protein Docking
0.
Kohlbacher,
A. Burchardt, A. Moll, A.
Hildebrandt,
P. Bayer, H.-P. Lenhof
...............................184
101
Optimal PDB Structure Alignments: a Branch-and-Cut Algorithm for the Maximum Contact Map Overlap
Problem
Giuseppe Lancia, Robert Carr, Brian Walenz,
Sorin Istrail
...................................................193
Invited Presentation:
Comparative analysis of organelle genomes, a biologist s view of computational challenges
Franz Lang
...................................................................................................203
DNA
Segmentation as A Model Selection Process
Wentian Li
..................................................................................................204
Edit Distance Between Two
RNA
Structures
Guo-Hui Lin, Bin Ma, Kaizhong Zhang
......................................................................211
Invited Presentation:
Genetics and Genomics: Impact on Drug Discovery and Development
Klaus Lindpaintner
..................................................................................... 221
Invited Presentation:
The Role of Computational Chemistry in Translating Genomic Information into Bioactive Small Molecules
Yvonne Martin
......................................................................................... 223
Comparing Sequence Scaffolds
Gene Myers
..................................................................................................224
Fast and Simple Character Classes and Bounded Gaps Pattern Matching, With Application to Protein Searching
Gonzalo Navarro,
Mathieu
Raffinat...........................................................................231
Applications
of Generalized Pair Hidden Markov Models to Alignment and Gene Finding Problems
Lior
Pachter,
Marina
Alexandersson,
Simon Cawley
..........................................................241
Gene Functional Classification From Heterogenous Data
Paul Pavlidis, Jason Weston, Jinsong
Cai,
William Noble Grundy
............................................249
A New Approach to Fragment Assembly in
DNA
Sequencing
Pavel A. Pevzner, Haixu Tang, Michael S. Waterman
........................................................256
Invited Presentation:
Imposing Specificity by Regulated Localization
Mark Ptashne
............................,...................................................................268
Large Scale Sequencing By Hybridization
Ron Shamir, Dekel Tsur
......................................................................................269
Invited Presentation:
RNA
Biology and the Genome
Philip Sharp
..................................................................................................278
Towards Predicting Coiled-Coil Protein Interactions
Mona
Singh, Peter S. Kim
...................................................................................279
Using Motion Planning to Study Protein Folding Pathways
Guang Song, Nancy M.
Amato
...............................................................................287
Zinc Finger Gene Clusters and Tandem Gene Duplication
Mengxiang Tang, Michael S. Waterman, Shibu Yooseph
......................................................297
A Gibbs Sampling Method to Detect Over-represented Motifs in the Upstream Regions of Co-expressed Genes
Gert
Thijs, Kathleen
Marchai,
Magali
Lescot,
Stéphane
Rombauts,
Bart De
Moor, P. Rouze, Y. Moreau
......305
Invited Presentation:
Creating the Backbone for the Virtual Cell: Cell Mapping Projects on the Run
Matthias Wilm
...............................................................................................313
Author Index
................................................................................................314
IX
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| spelling | RECOMB 5 2001 Montréal Verfasser (DE-588)10028286-6 aut RECOMB 2001 proceedings of the Fifth Annual International Conference on Computational Biology ; April 22 - 25, 2001, Montreal, Canada Thomas Lengauer ... ed. New York, NY Assoc. for Computing Machinery 2001 IX, 316 S. Ill., graph. Darst. txt rdacontent n rdamedia nc rdacarrier Bioinformatique - Congrès ram Biologie moléculaire - Mathématiques - Congrès Biologie moléculaire - Modèles mathématiques - Congrès Biologie moléculaire - Simulation par ordinateur - Congrès Biologie moléculaire - Simulation par ordinateur - Congrès ram Molecular biology Computer simulation Congresses Biomathematik (DE-588)4139408-2 gnd rswk-swf Bioinformatik (DE-588)4611085-9 gnd rswk-swf (DE-588)1071861417 Konferenzschrift 2001 Montréal gnd-content Bioinformatik (DE-588)4611085-9 s DE-604 Biomathematik (DE-588)4139408-2 s Lengauer, Thomas Sonstige oth Digitalisierung TU Muenchen application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=009489308&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | RECOMB 2001 proceedings of the Fifth Annual International Conference on Computational Biology ; April 22 - 25, 2001, Montreal, Canada Bioinformatique - Congrès ram Biologie moléculaire - Mathématiques - Congrès Biologie moléculaire - Modèles mathématiques - Congrès Biologie moléculaire - Simulation par ordinateur - Congrès Biologie moléculaire - Simulation par ordinateur - Congrès ram Molecular biology Computer simulation Congresses Biomathematik (DE-588)4139408-2 gnd Bioinformatik (DE-588)4611085-9 gnd |
| subject_GND | (DE-588)4139408-2 (DE-588)4611085-9 (DE-588)1071861417 |
| title | RECOMB 2001 proceedings of the Fifth Annual International Conference on Computational Biology ; April 22 - 25, 2001, Montreal, Canada |
| title_auth | RECOMB 2001 proceedings of the Fifth Annual International Conference on Computational Biology ; April 22 - 25, 2001, Montreal, Canada |
| title_exact_search | RECOMB 2001 proceedings of the Fifth Annual International Conference on Computational Biology ; April 22 - 25, 2001, Montreal, Canada |
| title_full | RECOMB 2001 proceedings of the Fifth Annual International Conference on Computational Biology ; April 22 - 25, 2001, Montreal, Canada Thomas Lengauer ... ed. |
| title_fullStr | RECOMB 2001 proceedings of the Fifth Annual International Conference on Computational Biology ; April 22 - 25, 2001, Montreal, Canada Thomas Lengauer ... ed. |
| title_full_unstemmed | RECOMB 2001 proceedings of the Fifth Annual International Conference on Computational Biology ; April 22 - 25, 2001, Montreal, Canada Thomas Lengauer ... ed. |
| title_short | RECOMB 2001 |
| title_sort | recomb 2001 proceedings of the fifth annual international conference on computational biology april 22 25 2001 montreal canada |
| title_sub | proceedings of the Fifth Annual International Conference on Computational Biology ; April 22 - 25, 2001, Montreal, Canada |
| topic | Bioinformatique - Congrès ram Biologie moléculaire - Mathématiques - Congrès Biologie moléculaire - Modèles mathématiques - Congrès Biologie moléculaire - Simulation par ordinateur - Congrès Biologie moléculaire - Simulation par ordinateur - Congrès ram Molecular biology Computer simulation Congresses Biomathematik (DE-588)4139408-2 gnd Bioinformatik (DE-588)4611085-9 gnd |
| topic_facet | Bioinformatique - Congrès Biologie moléculaire - Mathématiques - Congrès Biologie moléculaire - Modèles mathématiques - Congrès Biologie moléculaire - Simulation par ordinateur - Congrès Molecular biology Computer simulation Congresses Biomathematik Bioinformatik Konferenzschrift 2001 Montréal |
| url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=009489308&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
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