The rhizobiaceae: molecular biology of model plant associated bacteria
Gespeichert in:
| Format: | Buch |
|---|---|
| Sprache: | English |
| Veröffentlicht: |
Dordrecht [u.a.]
Kluwer
1998
|
| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | XIII, 8, 566 S. Ill., graph. Darst. |
| ISBN: | 0792351797 0792351800 |
Internformat
MARC
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| 264 | 1 | |a Dordrecht [u.a.] |b Kluwer |c 1998 | |
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| 650 | 7 | |a Microbiologie moléculaire |2 ram | |
| 650 | 4 | |a Microbial biotechnology | |
| 650 | 4 | |a Molecular microbiology | |
| 650 | 4 | |a Plant genetic engineering | |
| 650 | 4 | |a Rhizobiaceae | |
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Datensatz im Suchindex
| _version_ | 1804126861955956736 |
|---|---|
| adam_text | The Rhizobiaceae
Molecular Biology of Model
Plant-Associated Bacteria
Edited by
Herman P Spaink
Leiden University,
Institute of Molecular Plant Sciences,
Clusius Laboratory,
Leiden, The Netherlands
Adam Kondorosi
CNRS,
Institut des Sciences Vegetales,
Gifsur Yvette,
Cedex, France
Paul J J Hooykaas
Leiden University,
Institute of Molecular Plant Sciences,
Clusius Laboratory,
Leiden, The Netherlands
and
KLUWER ACADEMIC PUBLISHERS
DORDRECHT/BOSTON/LONDON
V
Contents
Preface xiii
Color Plates CP-1
1 Molecular Evolutionary Systematics of the Rhizobiaceae 1-24
Peter van Berkum and Bertrand D Eardly
I Introduction 2
II Historical Perspective 3
m Approaches for Determining Taxonomic Relationships 3
IV Methods for Estimating Phylogenetic Relatedness 4
V The Genera of the Rhizobiaceae 9
VI Possible Alternative Speciation Criteria 20
VII References 21
2 General Genetic Knowledge 25-43
Michael F Hynes and TurloughM Finan
I Introduction: A Strange Family! 25
II Genetic Maps and Genome Arrangement 26
III Gene Transfer and Recombination 34
IV Vectors and other Genetic Tools 37
V References 40
3r Outer Membrane Proteins 45-53
Ben J J Lugtenberg
I The Cell Envelope of Gram-Negative Bacteria 45
II The Outer Membrane of Rhizobiaceae 47
III Genetics of Outer Membrane Proteins 51
IV References 52
4 Phospholipids and Alternative Membrane Lipids 55-80
Otto Geiger
I Introduction 56
II Lipid Components 56
III Genetic Analysis of Lipid Metabolism 57
IV Fatty Acids in Rhizobiaceae 58
vi
V Fatty Acid Biosynthesis 59
VI Phospholipids in Rhizobiaceae 69
VII Phospholipid (PL) Biosynthesis 69
VIII Phospholipid Turnover 73
IX Regulation of Phospholipid Biosynthesis 73
X Alternative Membrane Lipids 73
XI Amphiphilic Fatty Acid Derivatives 76
XII Perspectives 77
XIII References 77
5 Cell-surface P-glucans 81-96
Michael W Breedveld and Karen J Miller
I Introduction 81
II Structural Characteristics of the Cyclic p-Glucans 81
III Localization of the Cyclic p-Glucans 83
IV Biosynthesis of the Cyclic p-Glucans 84
V Roles for Cyclic P-Glucans During Hypoosmotic Adaptation 88
VI Cyclic P-Glucans and Bacterium-Plant Interactions 90
VII Concluding Remarks and Future Perspectives 94
VIII Acknowledgements 94
IX References 95
6 Production of Exopolysaccharides 97-118
Anke Becker and Alfred Piihler
I Introduction 97
II Principles of Exopolysaccharide Structure and Biosynthesis 98
HI The Genetics ofRhizobial Exopolysaccharide Biosynthesis 100
- IV Functions of Rhizobial Exopoly saccharides in the Free-Living State and and Their Role in the
Root Nodule_Symbiosis 112
V Conclusions and Perspectives 115
VI References 115
7 Lipopolysaccharides and K-Antigens: Their Structures, Biosynthesis
and Functions 119-154
ElmarL Kannenberg, Bradley L Reuhs, L Scott Forsberg, and
Russell W Carlson
I Introduction 119
XII Lipopolysaccharides 121
III K-Antigens 144
IV Conclusions 148
V Acknowledgements 150
vii
VI References 150
8 Soil Biology of the Rhizobiaceae 155-172
Michael J Sadowsky and Peter H Graham
I Introduction 155
II Soil Populations of the Rhizobia and Their Diversity 156
in Rhizobial Persistence in Soil and Rhizosphere 158
IV Influence of the Legume Host on Rhizobial Populations and Diversity in Soil 158
V Biotic and Abiotic Effects on Soil Rhizobia 160
VI Competition in Soil and Rhizosphere 163
VII References 167
{ 9 Opines and Opine-Like Molecules Involved in Vlsnt-Rhizobiaceae
Interactions 173-197
Yves Dessaux, Annik Petit, Stephen K Farrand and Peter J Murphy
I Introduction 173
II The Development of the Opine Concept 175
III Opine-like Molecules in the Rhizobium-Legame Interaction 177
IV Recent Advances in Opine Research in the Agrobacterium-Planl Interaction 181
V Opines as Key Compounds in the Agrobacterium-Plant Interaction 192
VI Where Does the Opine Trail Lead? 192
VII Acknowledgments 194
VIII References 194
J 10 Conjugal Plasmids and Their Transfer 199-233
Stephen K Farrand
I Introduction 199
II Occurrence of Transmissible Elements in the Family Rhizobiaceae 200
III Conjugal Transfer Systems of Agrobacterium Ti Plasmids 204
IV Regulation ofTiPlasmid Conjugation, 211
V Characteristics ofTiPlasmid Conjugal Transfer 223
VI Conjugal Transfer Systems of Other Plasmids 226
VII Biological Significance and Implications 228
VIII Acknowledgements 230
IX References 230
11 Attachment of Rhizobiaceae to Plant Cells 235-249
Ann G Matthysse and Jan W Kijne
I Introduction 235
VUl
n Methods
III Genetics of Bacterial Adhesion
IV Bacterial Adhesins
V Plant Adhesins
VI Environmental Factors
VII Conclusion
VIII References
12 The Agrobacterium Oncogenes
Andrew N Binns and Paolo Costantino
I Crown Galls and Hairy Roots as Neoplastic Disease
II T-DNA Oncogenes
III Interaction of Agrobacterium Oncogenes and Plant Oncogenes
IV Concluding Remarks
V References
13 Organization and Regulation of Expression of the Agrobacterium
Virulence Genes
Tonny M Johnson and Anath Das
I Introduction
II Functions Essential for DNA Transfer
III Regulation of vir Gene Expression
IV Conclusions
V Acknowledgements
VI References
14 Function of the Ti-Plasmid Vir Proteins: T-Complex Formation and
Transfer to the Plant Cell
Fernando de la Cruz and Erich Lanka
I Introduction
II T-DNA Transfer is a Specialized Form of Bacterial Conjugation
III Production of T-Strands
IV T-Strand Activation y
V The VirB-Transport Structure
VI The VirE and VirF Operons
VII Analogies to other Protein Transport Systems: T-Complex Transfer and
Conjugation Use a Type IV Protein Export Pathway
VIII Acknowledgements
IX References
ix
15 Role of Virulence Proteins of Agrobacterium in the Plant 303-320
Luca Rossi, Bruno Tinland and Barbara Hohn
I Introduction 303
II T-DNA Processing 304
in The ss-T-DNA-VirD2-VirE2 Complex (T-Complex) 306
IV Nuclear Import of the T-Complex 309
V Integration of the T-DNA 312
VI Horizontal Gene Transfer 316
VII Perspectives 318
VIII Acknowledgements 319
IX References 319
16 Determinants of Host Specificity of Agrobacterium and their Function 321-338
Wanyin Deng and Eugene W Nester
I Introduction 321
II Ti Plasmids and Host Specificity 322
III Agrobacterium Chromosomal Factors and Host Specificity 328
IV Plant Factors sad Agrobacterium Host Specificity 332
V Transformation of Monocots and Recalcitrant Plants by Agrobacterium:
Successes and Challenges 333
VI Concluding Remarks 335
VII References 335
17 The Use of Agrobacterium for Plant Genetic Engineering 339-345
Kathleen D Halluin andJohan Botterman
I Introduction 339
II Vector Design 339
III Method 340
IV Agrobacterium-Mediated Transformation Versus Direct Gene Transfer Methods 341
V Gene Tagging 341
VI Gene Targeting 341
VII Application of Agrobacterium-Mediated Transformation for Engineering New Traits in
Plant Species 342
VIII References 344
18 Diversity of Root Nodulation and Rhizobial Infection Processes 347-360
Az-Eddine Hadri, Herman P Spaink, Ton Bisseling and Nicholas J Brewin
I Rhizobial Host Specificity 347
II Evolutionary Diversity of the Nodulation Process 348
m Comparative Anatomy and Structure of the Root Nodule 349
X
IV Plant Regulation of Nodulation 358
V Acknowledgements 359
VI References 359
19 Genetic Organization and Transcriptional Regulation of Rhizobial
Nodulation Genes 361-386
Helmi R M Schlaman, Donald A Phillips and Eva Kondorosi
I Introduction 361
II Genetic Organization of Nodulation Genes 363
HI nod Box-Containing Promoters 364
IV The Transcriptional Regulators NodD and SyrM 368
V Nodulation Gene Inducing Compounds 371
VI Interaction Between NodD Proteins and nod Box Sequences 375
VII Positive Regulation of Nodulation Genes by Other Regulatory Systems 377
VIII Negative Regulation of Nodulation Gene Expression 377
IX Other Regulatory Factors in Nodulation Gene Expression 380
X Nodulation Gene Expression at Later Stages of Symbiosis 381
XI Conclusions and Perspectives 382
XII Acknowledgements 382
XIII References 383
20 Functions of Rhizobial Nodulation Genes 387-402
J Allan Downie
I Introduction 387
II Nod Factor Biosynthesis 388
III Rhizobia-Specific Modifications to Nod Factors 388
IV Nod Factor Secretion 395
V Protein Secretion 397
VI Genes of Unknown Function 397
W Concluding Remarks 398
VIII Acknowledgements^ 399
DC References 399
21 Responses of the Plant to Nod Factors 403-416
Az-Eddine Hadri and Ton Bisseling
I Introduction 403 -
II Nod Factor-Induced Responses 403
III Structure-Function Relationship And Perception Mechanisms Of Nod Factors 411
IV Defense Related-Responses Induced during Rhizobia-Legume Interaction 414
V References 415
xi
22 Tissue and Cell Invasion by Rhizobiunu The Structure and Development
of Infection Threads and Symbiosomes 417-429
Nicholas J Brewin
I Colonisation of the Intercellular Space: The Formation of Infection Threads 417
II Endocytosis of Bacteria and the Differentiation of Bacteroids 423
III Symbiosomes and the Role of the Symbiosomal Membrane 424
IV Conclusions 427
V Acknowledgements 427
VI References 428
23 A Survey of Symbiotic Nitrogen Fixation by Rhizobia 431-460
Pierre A Kaminski, Jacques Batut and Pierre Boistard
I Introduction 431
II Nitrogenase Synthesis and Activity in Rhizobia 433
III Symbiotic Nitrogen Fixation by Rhizobia 437
IV Regulation of Nitrogen Fixation Genes 447
V Conclusions and Perspectives 453
VI Acknowledgements 456
VII References 456
24 Carbon and Nitrogen Metabolism in Rhizobia 461-485
Michael L Kahn, Tim R McDermott and Michael K Udvardi
I Introduction 461
II Carbon and Nitrogen Metabolism in Free-Living Rhizobia 462
III Integration of Bacteroid and Plant Carbon and Nitrogen Metabolism in Nodules 468
- IV Summary and Future Directions 480
V References 481
25 Evolutionary Aspects of Symbiotic Adaptations, Rhizobium s
Contribution to Evolution by Association 487-507
Anton Quispel
I Introduction 487
II Evolution of Symbiosis: from Loose Associations to Endocytosis 488
III Evolution by Symbiosis: Symbiosomes and Organelles 496
IV General Conclusions and Final Remarks 503
V References 504
Xll
26 Legume Symbiotic Nitrogen Fixation: Agronomic Aspects
Carroll P Vance
I Importance of Legume Symbiotic N2 Fixation
II Symbiotic N2 Fixation
III Host Selection for Improved N2 Fixation
IV Legume Fixed N2: Benefits to Cropping Systems
V New Uses for N2-Fixing Legumes
VI Conclusions
VII Acknowledgements
VIII References
Contributors
Abbreviations
Subject Index
|
| any_adam_object | 1 |
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| dewey-ones | 579 - Microorganisms, fungi & algae |
| dewey-raw | 579.3/34 |
| dewey-search | 579.3/34 |
| dewey-sort | 3579.3 234 |
| dewey-tens | 570 - Biology |
| discipline | Biologie |
| format | Book |
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| spelling | The rhizobiaceae molecular biology of model plant associated bacteria ed. by Herman P. Spaink ... Dordrecht [u.a.] Kluwer 1998 XIII, 8, 566 S. Ill., graph. Darst. txt rdacontent n rdamedia nc rdacarrier Génie génétique ram Microbiologie moléculaire ram Microbial biotechnology Molecular microbiology Plant genetic engineering Rhizobiaceae Molekularbiologie (DE-588)4039983-7 gnd rswk-swf Rhizobiaceae (DE-588)4473898-5 gnd rswk-swf (DE-588)4143413-4 Aufsatzsammlung gnd-content Rhizobiaceae (DE-588)4473898-5 s Molekularbiologie (DE-588)4039983-7 s DE-604 Spaink, Herman P. Sonstige oth HEBIS Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=008297251&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | The rhizobiaceae molecular biology of model plant associated bacteria Génie génétique ram Microbiologie moléculaire ram Microbial biotechnology Molecular microbiology Plant genetic engineering Rhizobiaceae Molekularbiologie (DE-588)4039983-7 gnd Rhizobiaceae (DE-588)4473898-5 gnd |
| subject_GND | (DE-588)4039983-7 (DE-588)4473898-5 (DE-588)4143413-4 |
| title | The rhizobiaceae molecular biology of model plant associated bacteria |
| title_auth | The rhizobiaceae molecular biology of model plant associated bacteria |
| title_exact_search | The rhizobiaceae molecular biology of model plant associated bacteria |
| title_full | The rhizobiaceae molecular biology of model plant associated bacteria ed. by Herman P. Spaink ... |
| title_fullStr | The rhizobiaceae molecular biology of model plant associated bacteria ed. by Herman P. Spaink ... |
| title_full_unstemmed | The rhizobiaceae molecular biology of model plant associated bacteria ed. by Herman P. Spaink ... |
| title_short | The rhizobiaceae |
| title_sort | the rhizobiaceae molecular biology of model plant associated bacteria |
| title_sub | molecular biology of model plant associated bacteria |
| topic | Génie génétique ram Microbiologie moléculaire ram Microbial biotechnology Molecular microbiology Plant genetic engineering Rhizobiaceae Molekularbiologie (DE-588)4039983-7 gnd Rhizobiaceae (DE-588)4473898-5 gnd |
| topic_facet | Génie génétique Microbiologie moléculaire Microbial biotechnology Molecular microbiology Plant genetic engineering Rhizobiaceae Molekularbiologie Aufsatzsammlung |
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