MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming:
Abstract: "A multiple alignment methodology that can produce high quality alignment is extremely important for predicting the structure of unknown proteins. Nearly all the methodologies developed so far have employed 2-way alignment only. Though these methods are fast, the alignments they produ...
Gespeichert in:
| Format: | Buch |
|---|---|
| Sprache: | English |
| Veröffentlicht: |
Tokyo, Japan
1992
|
| Schriftenreihe: | Shin-Sedai-Konpyūta-Gijutsu-Kaihatsu-Kikō <Tōkyō>: ICOT technical report
728 |
| Schlagworte: | |
| Zusammenfassung: | Abstract: "A multiple alignment methodology that can produce high quality alignment is extremely important for predicting the structure of unknown proteins. Nearly all the methodologies developed so far have employed 2-way alignment only. Though these methods are fast, the alignments they produce lose reliability as the similarity of sequences reduces. We developed the MASCOT multiple alignment system. MASCOT can sustain the reliability of alignment even when the similarity of sequences is low. MASCOT achieves high-quality alignment by employing 3-way alignment in addition to 2-way alignment. The resultant alignments are refined by Simulated Annealing to further quality. We also use a cluster analysis of sequences to produce highly reliable alignments." |
| Beschreibung: | 13 S. |
Internformat
MARC
| LEADER | 00000nam a2200000 cb4500 | ||
|---|---|---|---|
| 001 | BV010956183 | ||
| 003 | DE-604 | ||
| 005 | 00000000000000.0 | ||
| 007 | t | ||
| 008 | 960918s1992 |||| 00||| engod | ||
| 035 | |a (OCoLC)26726525 | ||
| 035 | |a (DE-599)BVBBV010956183 | ||
| 040 | |a DE-604 |b ger |e rakddb | ||
| 041 | 0 | |a eng | |
| 049 | |a DE-91G | ||
| 245 | 1 | 0 | |a MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming |c by M. Hirosawa ... |
| 264 | 1 | |a Tokyo, Japan |c 1992 | |
| 300 | |a 13 S. | ||
| 336 | |b txt |2 rdacontent | ||
| 337 | |b n |2 rdamedia | ||
| 338 | |b nc |2 rdacarrier | ||
| 490 | 1 | |a Shin-Sedai-Konpyūta-Gijutsu-Kaihatsu-Kikō <Tōkyō>: ICOT technical report |v 728 | |
| 520 | 3 | |a Abstract: "A multiple alignment methodology that can produce high quality alignment is extremely important for predicting the structure of unknown proteins. Nearly all the methodologies developed so far have employed 2-way alignment only. Though these methods are fast, the alignments they produce lose reliability as the similarity of sequences reduces. We developed the MASCOT multiple alignment system. MASCOT can sustain the reliability of alignment even when the similarity of sequences is low. MASCOT achieves high-quality alignment by employing 3-way alignment in addition to 2-way alignment. The resultant alignments are refined by Simulated Annealing to further quality. We also use a cluster analysis of sequences to produce highly reliable alignments." | |
| 650 | 4 | |a Datenverarbeitung | |
| 650 | 4 | |a Dynamic programming | |
| 650 | 4 | |a Proteins |x Data processing | |
| 700 | 1 | |a Hirosawa, Makoto |e Sonstige |4 oth | |
| 830 | 0 | |a Shin-Sedai-Konpyūta-Gijutsu-Kaihatsu-Kikō <Tōkyō>: ICOT technical report |v 728 |w (DE-604)BV010923438 |9 728 | |
| 999 | |a oai:aleph.bib-bvb.de:BVB01-007328352 | ||
Datensatz im Suchindex
| _version_ | 1804125443392012288 |
|---|---|
| any_adam_object | |
| building | Verbundindex |
| bvnumber | BV010956183 |
| ctrlnum | (OCoLC)26726525 (DE-599)BVBBV010956183 |
| format | Book |
| fullrecord | <?xml version="1.0" encoding="UTF-8"?><collection xmlns="http://www.loc.gov/MARC21/slim"><record><leader>01805nam a2200313 cb4500</leader><controlfield tag="001">BV010956183</controlfield><controlfield tag="003">DE-604</controlfield><controlfield tag="005">00000000000000.0</controlfield><controlfield tag="007">t</controlfield><controlfield tag="008">960918s1992 |||| 00||| engod</controlfield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(OCoLC)26726525</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(DE-599)BVBBV010956183</subfield></datafield><datafield tag="040" ind1=" " ind2=" "><subfield code="a">DE-604</subfield><subfield code="b">ger</subfield><subfield code="e">rakddb</subfield></datafield><datafield tag="041" ind1="0" ind2=" "><subfield code="a">eng</subfield></datafield><datafield tag="049" ind1=" " ind2=" "><subfield code="a">DE-91G</subfield></datafield><datafield tag="245" ind1="1" ind2="0"><subfield code="a">MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming</subfield><subfield code="c">by M. Hirosawa ...</subfield></datafield><datafield tag="264" ind1=" " ind2="1"><subfield code="a">Tokyo, Japan</subfield><subfield code="c">1992</subfield></datafield><datafield tag="300" ind1=" " ind2=" "><subfield code="a">13 S.</subfield></datafield><datafield tag="336" ind1=" " ind2=" "><subfield code="b">txt</subfield><subfield code="2">rdacontent</subfield></datafield><datafield tag="337" ind1=" " ind2=" "><subfield code="b">n</subfield><subfield code="2">rdamedia</subfield></datafield><datafield tag="338" ind1=" " ind2=" "><subfield code="b">nc</subfield><subfield code="2">rdacarrier</subfield></datafield><datafield tag="490" ind1="1" ind2=" "><subfield code="a">Shin-Sedai-Konpyūta-Gijutsu-Kaihatsu-Kikō <Tōkyō>: ICOT technical report</subfield><subfield code="v">728</subfield></datafield><datafield tag="520" ind1="3" ind2=" "><subfield code="a">Abstract: "A multiple alignment methodology that can produce high quality alignment is extremely important for predicting the structure of unknown proteins. Nearly all the methodologies developed so far have employed 2-way alignment only. Though these methods are fast, the alignments they produce lose reliability as the similarity of sequences reduces. We developed the MASCOT multiple alignment system. MASCOT can sustain the reliability of alignment even when the similarity of sequences is low. MASCOT achieves high-quality alignment by employing 3-way alignment in addition to 2-way alignment. The resultant alignments are refined by Simulated Annealing to further quality. We also use a cluster analysis of sequences to produce highly reliable alignments."</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Datenverarbeitung</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Dynamic programming</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Proteins</subfield><subfield code="x">Data processing</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Hirosawa, Makoto</subfield><subfield code="e">Sonstige</subfield><subfield code="4">oth</subfield></datafield><datafield tag="830" ind1=" " ind2="0"><subfield code="a">Shin-Sedai-Konpyūta-Gijutsu-Kaihatsu-Kikō <Tōkyō>: ICOT technical report</subfield><subfield code="v">728</subfield><subfield code="w">(DE-604)BV010923438</subfield><subfield code="9">728</subfield></datafield><datafield tag="999" ind1=" " ind2=" "><subfield code="a">oai:aleph.bib-bvb.de:BVB01-007328352</subfield></datafield></record></collection> |
| id | DE-604.BV010956183 |
| illustrated | Not Illustrated |
| indexdate | 2024-07-09T18:01:38Z |
| institution | BVB |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-007328352 |
| oclc_num | 26726525 |
| open_access_boolean | |
| owner | DE-91G DE-BY-TUM |
| owner_facet | DE-91G DE-BY-TUM |
| physical | 13 S. |
| publishDate | 1992 |
| publishDateSearch | 1992 |
| publishDateSort | 1992 |
| record_format | marc |
| series | Shin-Sedai-Konpyūta-Gijutsu-Kaihatsu-Kikō <Tōkyō>: ICOT technical report |
| series2 | Shin-Sedai-Konpyūta-Gijutsu-Kaihatsu-Kikō <Tōkyō>: ICOT technical report |
| spelling | MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming by M. Hirosawa ... Tokyo, Japan 1992 13 S. txt rdacontent n rdamedia nc rdacarrier Shin-Sedai-Konpyūta-Gijutsu-Kaihatsu-Kikō <Tōkyō>: ICOT technical report 728 Abstract: "A multiple alignment methodology that can produce high quality alignment is extremely important for predicting the structure of unknown proteins. Nearly all the methodologies developed so far have employed 2-way alignment only. Though these methods are fast, the alignments they produce lose reliability as the similarity of sequences reduces. We developed the MASCOT multiple alignment system. MASCOT can sustain the reliability of alignment even when the similarity of sequences is low. MASCOT achieves high-quality alignment by employing 3-way alignment in addition to 2-way alignment. The resultant alignments are refined by Simulated Annealing to further quality. We also use a cluster analysis of sequences to produce highly reliable alignments." Datenverarbeitung Dynamic programming Proteins Data processing Hirosawa, Makoto Sonstige oth Shin-Sedai-Konpyūta-Gijutsu-Kaihatsu-Kikō <Tōkyō>: ICOT technical report 728 (DE-604)BV010923438 728 |
| spellingShingle | MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming Shin-Sedai-Konpyūta-Gijutsu-Kaihatsu-Kikō <Tōkyō>: ICOT technical report Datenverarbeitung Dynamic programming Proteins Data processing |
| title | MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming |
| title_auth | MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming |
| title_exact_search | MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming |
| title_full | MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming by M. Hirosawa ... |
| title_fullStr | MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming by M. Hirosawa ... |
| title_full_unstemmed | MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming by M. Hirosawa ... |
| title_short | MASCOT, multiple alignment system for protein sequences based on 3-way dynamic programming |
| title_sort | mascot multiple alignment system for protein sequences based on 3 way dynamic programming |
| topic | Datenverarbeitung Dynamic programming Proteins Data processing |
| topic_facet | Datenverarbeitung Dynamic programming Proteins Data processing |
| volume_link | (DE-604)BV010923438 |
| work_keys_str_mv | AT hirosawamakoto mascotmultiplealignmentsystemforproteinsequencesbasedon3waydynamicprogramming |