Handbook of methods in aquatic microbial ecology:
Gespeichert in:
| Format: | Buch |
|---|---|
| Sprache: | English |
| Veröffentlicht: |
Boca Raton [u.a.]
Lewis
1993
|
| Schlagworte: | |
| Online-Zugang: | Inhaltsverzeichnis |
| Beschreibung: | 777 S. Ill., graph. Darst. |
| ISBN: | 0873715640 |
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Datensatz im Suchindex
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| adam_text | HANDBOOK OF METHODS IN
AQUATIC MICROBIAL ECOLOGY
EDITED BY
PAUL F KEMP
BARRY F SHERR
EVELYN B SHERR
JONATHAN J COLE
-
n|| LEWIS PUBLISHERS
P*™ Boca Raton Ann Arbor London Tokyo
TABLE OF CONTENTS
Introduction, by J E Hobbie 1
Section I Isolation of Living Cells
1 Isolation and Enumeraton of Anaerobic and Microaerophilic Bacteria in
Aquatic Habitats, by M J Ferrara-Guerrero, D G Marty, and
A Bianchi 9
2 Isolation and Cultivation of Hyperthermophilic Bacteria from Marine and
Freshwater Habitats, by J A Baross 21
3 Isolation of Psychrophilic Bacteria, by R Y Morita 31
4 Isolation and Characterization of Bacteriocytes from a Bivalve-Sulfur
Bacterium Symbiosis, by S C Hand and A E Anderson 33
5 General Techniques for the Isolation and Culture of Marine Protists from
Estuarine, Littoral, Psammolittoral, and Sublittoral Waters, by
J J Lee 41
6 Long-Term Culture of Marine Benthic Protists, by P G Carey 51
7 Behavior and Bioenergetics of Anaerobic and Microaerobic Protists, by
B J Finlay 59
8 Culturing Free-Living Marine Phagotrophic Dinoflagellates, by
E J Lessard 67
9 Enrichment, Isolation, and Culture of Free-Living Heterotrophic
Flagellates, by D A Caron 77
10 Determination of Pressure Effects on Flagellates Isolated from Surface
Waters, by C M Turley 91
11 Isolation, Cloning, and Axenic Cultivation of Marine Ciliates, by
A T Soldo and S A Brickson 97
12 Isolation and Laboratory Culture of Marine Oligotrichous Ciliates, by
D J Gifford 103
13 Extraction of Protists in Aquatic Sediments via Density Gradient
Centrifugation, by D M Alongi 109
Section II Identification, Enumeration, and Diversity
14 Statistical Analysis of Direct Counts of Microbial Abundance, by
D L Kirchman 117
15 Enumeration and Isolation of Viruses, by C A Suttle 121
16 Total Count of Viruses in Aquatic Environments, by G Bratbak and
M Heldal 135
v 17 Improved Sample Preparation for Enumeration of Aggregated Aquatic
Substrate Bacteria, by M I Velji and L J Albright 139
/ 18 Direct Estimates of Bacterial Numbers in Seawater Samples Without
Incurring Cell Loss Due to Sample Storage, by C M Turley 143
f 19 Total and Specific Bacterial Counts by Simultaneous Staining with DAPI
and Fluorochrome-Labeled Antibodies, by K A Hoff 149
20 Use of RFLPs for the Comparison of Marine Cyanobacteria, by
S E Douglas 155
^ 21 Use of High-Resolution Flow Cytometry to Determine the Activity and
Distribution of Aquatic Bacteria, by D K Button and
B R Robertson 163
22 Phytoplankton Analysis Using Flow Cytometry, by R J Olson,
E R Zettler, and M D DuRand 175
23 Enumeration of Phototrophic Picoplankton by Autofluorescence
Microscopy, by E A Maclsaac and J G Stockner 187
24 Estimating Cell Concentration and Biomass of Autotrophic Plankton
Using Microscopy, by B C Booth 199
25 Preservation and Storage of Samples for Enumeration of Heterotrophic
Protists, by E B Sherr and B F Sherr 207
26 Staining of Heterotrophic Protists for Visualization via Epifluorescence
Microscopy, by E B Sherr, D A Caron, and B F Sherr 213
27 A Quantitative Protargol Stain (QPS) for Ciliates and Other Protists, by
DJS Montagnes and D H Lynn 229
28 Preparation of Pelagic Protists for Electron Microscopy, by
BSC Leadbeater 241
•y 29 A Rapid Technique for the Taxonomy of Methanogenic Bacteria:
Comparison of the Methylreductase Subunits, by P E Rouviere and
C H Kuhner 253
v 30 Extraction of DNA from Soils and Sediments, by R M Atlas 261
31 Detecting Gene Sequences Using the Polymerase Chain Reaction, by
R M Atlas 267
32 Quantitative Description of Microbial Communities Using Lipid Analysis,
by R H Findlay and F C Dobbs 271
33 Single Cell Identification Using Fluorescently Labeled, Ribosomal
RNA-Specific Probes, by E F DeLong 285
34 Immunofluorescence Method for the Detection and Characterization of
Marine Microbes, by L Campbell 295
Section III Biomass
35 The Relationship Between Biomass and Volume of Bacteria, by
S Norland 303
36 Microscope Methods for Measuring Bacterial Biovolume: Epifluorescence
Microscopy, Scanning Electron Microscopy, and Transmission Electron
Microscopy, by G Bratbak 309
37 Measurement of Carbon and Nitrogen Biomass and Biovolume from
Naturally Derived Marine Bacterioplankton, by S Lee 319
38 Use of Color Image Analysis and Epifluorescence Microscopy to Measure
Plankton Biomass, by P G Verity and M E Sieracki 327
39 Determination of Size and Morphology of Aquatic Bacteria by Automated
Image Analysis, by R Psenner 339
40 Analysis of Microbial Lipids to Determine Biomass and Detect the
Response of Sedimentary Microorganisms to Disturbance, by
F C Dobbs and R H Findlay 347
41 Total Microbial Biomass Estimation Derived from the Measurement of
Particulate Adenosine-5 -Triphosphate, by DM Karl 359
42 Microphytobenthic Biomass Measurement Using HPLC and Conventional
Pigment Analysis, by C Riaux-Gobin and B Klein 369
43 Microphotometric Analysis of the Spectral Absorption and Fluorescence
of Individual Phytoplankton Cells and Detrital Matter, by
R Iturriaga and S L Bower 377
44 Measurement of Elemental Content and Dry Weight of Single Cells:
X-Ray Microanalysis, by M Heldal 387
Section IV Activity, Respiration, and Growth
45 Microautoradiographic Detection of Microbial Activity, by
K R Carman 397
46 14C Tracer Method for Measuring Microbial Activity in Deep-Sea
Sediments, by J W Deming 405
47 Evaluating Bacterial Activity from Cell-Specific Ribosomal RNA Content
Measured with Oligonucleotide Probes, by P F Kemp, S Lee, and
J LaRoche 415
48 Use of Fluorogenic Model Substrates for Extracellular Enzyme Activity
(EEA) Measurement of Bacteria, by H -G Hoppe 423
49 Photoassimilation of Acetate by Algae, by R L Cuhel 433
50 Starvation-Survival Strategies in Bacteria, by R Y Morita 441
51 Community Respiration Measurements Using a Pulsed 02 Electrode, by
C Langdon 447
52 Sediment Community Production and Respiration Measurements: The Use
of Microelectrodes and Bell Jars, by PAG Hofman and
S A de Jong 455
53 Distinguishing Bacterial from Nonbacterial Decomposition of Spartina
alterniflora by Respirometry, by D E Padgett 465
54 Microbial RNA and DNA Synthesis Derived from the Assimilation of
[2,3H]-Adenine, by DM Karl 471
55 Adenosine Triphosphate (ATP) and Total Adenine Nucleotide (TAN) Pool
Turnover Rates as Measures of Energy Flux and Specific Growth Rate in
Natural Populations of Microorganisms, by DM Karl 483
56 Estimating Production of Heterotrophic Bacterioplankton via
Incorporation of Tritiated Thymidine, by R T Bell 495
57 Thymidine Incorporation into DNA as an Estimate of Sediment Bacterial
Production, by S Findlay 505
58 Leucine Incorporation as a Measure of Biomass Production by
Heterotrophic Bacteria, by D L Kirchman 509
59 I^stimating-Conversion Factors for the Thymidine and Leucine Methods
for Measuring Bacterial Production, by D L Kirchman and
H W Ducklow 513
60 Bacterial Production in Anaerobic Water Columns, by C Pedrds-Alio,
J G Cantizano, and J I Calderon 519
61 Production of Heterotrophic Bacteria Inhabiting Marine Snow, by
A L Alldredge 531
62 Bacterial Growth Rates Measured by Pulse Labeling, by P LaRock and
J -H Hyun 537
63 Utilization of Amino Acids and Precursors for Amino Acid De Novo
Synthesis by Planktonic Bacteria, by M Simon 547
64 Dialysis Bag Incubation as a Nonradiolabeling Technique to Estimate
Bacterioplankton Production In Situ, by G J Herndl,
E Kaltenbock, and G Muller-Niklas 553
65 Growth Rates of Natural Populations of Heterotrophic Nanoplankton, by
G B McManus 557
66 The Labeled Chlorophyll a Technique for Determining Photoautotrophic
Carbon-Specific Growth Rates and Carbon Biomass, by D G Redalje 563
67 Incorporation of 14C02 into Protein as an Estimate of Phytoplankton
N-Assimilation and Relative Growth Rate, by G R DiTullio 573
68 Membrane-Containing Fungal Mass and Fungal Specific Growth Rate in
Natural Samples, by S Y Newell 579
Section V Organic Matter Decomposition and Nutrient Regeneration
69 Radiotracer Approaches for the Study of Plant Polymer Biodegradation,
by R Benner 589
70 Estimating Degradation Rates of Chitin in Aquatic Samples, by
M T Montgomery and D L Kirchman 597
71 Measurement of Dimethylsulfide (DMS) and Dimethylsulfoniopropionate
(DMSP) in Seawater and Estimation of DMS Turnover Rates, by
R P Kiene 601
72 Sulfate Assimilation by Aquatic Microorganisms, by R L Cuhel 611
73 Determination of Nitrogenase Activity in Aquatic Samples Using the
Acetylene Reduction Procedure, by D G Capone 621
74 Denitrification and Nitrification Rates in Aquatic Sediments, by
S P Seitzinger 633
75 Turnover of 15NH4+ Tracer in Sediments, by
T H Blackburn 77 - 643
76 Microbial Cycling of Inorganic and Organic Phosphorus in the Water
Column, by J W Ammerman - 649
Section VI Food Webs and Trophic Interactions
77 Approaches for Measuring Stable Carbon and Nitrogen Isotopes in
Bacteria, by R B Coffin and L A Cifuentes 663
78 Bacterial Sinking Losses, by C Pedrds-Alio and J Mas 677
79 Methods for the Observation and Use in Feeding Experiments of
Microbial Exopolymers, byA VV Decho 685
80 Protistan Grazing Rates via Uptake of Fluorescently Labeled Prey, by
E B Sherr and B F Sherr 695
81 Grazing Rate of Bacterioplankton via Turnover of Genetically Marked
Minicells, by J Wikner 703
82 Estimating Rates of Growth and Grazing Mortality of Phytoplankton by
the Dilution Method, by M R Landry 715
83 Consumption of Protozoa by Copepods Feeding on Natural
Microplankton Assemblages, by D J Gifford 723
84 Predation on Planktonic Protists Assessed by Immunochemical Assays,
by M D Ohman 731
85 Absorption of Microbes by Benthic Macrofauna by the l4C:5lCr
Dual-Labeling Method, by G Lopez 739
86 Radioisotope Technique to Quantify In Situ Microbivory by Meiofauna in
Sediments, by P A Montagna 745
Index 757
•
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| indexdate | 2024-07-09T17:26:28Z |
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| isbn | 0873715640 |
| language | English |
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| spellingShingle | Handbook of methods in aquatic microbial ecology Eau - Microbiologie - Méthodologie - Guides, manuels, etc Eau - Microbiologie - Méthodologie ram Microbiologia larpcal Água larpcal Écologie microbienne - Méthodologie - Guides, manuels, etc Écologie microbienne - Méthodologie ram Microbial ecology Methodology Handbooks, manuals, etc Water Microbiology Methodology Handbooks, manuals, etc Wasser (DE-588)4064689-0 gnd Mikrobiologie (DE-588)4316357-9 gnd Methodologie (DE-588)4139716-2 gnd Süßwasser (DE-588)4058507-4 gnd |
| subject_GND | (DE-588)4064689-0 (DE-588)4316357-9 (DE-588)4139716-2 (DE-588)4058507-4 |
| title | Handbook of methods in aquatic microbial ecology |
| title_alt | Aquatic microbial ecology |
| title_auth | Handbook of methods in aquatic microbial ecology |
| title_exact_search | Handbook of methods in aquatic microbial ecology |
| title_full | Handbook of methods in aquatic microbial ecology ed. by Paul F. Kemp ... |
| title_fullStr | Handbook of methods in aquatic microbial ecology ed. by Paul F. Kemp ... |
| title_full_unstemmed | Handbook of methods in aquatic microbial ecology ed. by Paul F. Kemp ... |
| title_short | Handbook of methods in aquatic microbial ecology |
| title_sort | handbook of methods in aquatic microbial ecology |
| topic | Eau - Microbiologie - Méthodologie - Guides, manuels, etc Eau - Microbiologie - Méthodologie ram Microbiologia larpcal Água larpcal Écologie microbienne - Méthodologie - Guides, manuels, etc Écologie microbienne - Méthodologie ram Microbial ecology Methodology Handbooks, manuals, etc Water Microbiology Methodology Handbooks, manuals, etc Wasser (DE-588)4064689-0 gnd Mikrobiologie (DE-588)4316357-9 gnd Methodologie (DE-588)4139716-2 gnd Süßwasser (DE-588)4058507-4 gnd |
| topic_facet | Eau - Microbiologie - Méthodologie - Guides, manuels, etc Eau - Microbiologie - Méthodologie Microbiologia Água Écologie microbienne - Méthodologie - Guides, manuels, etc Écologie microbienne - Méthodologie Microbial ecology Methodology Handbooks, manuals, etc Water Microbiology Methodology Handbooks, manuals, etc Wasser Mikrobiologie Methodologie Süßwasser |
| url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=005870844&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
| work_keys_str_mv | AT kemppaulf handbookofmethodsinaquaticmicrobialecology AT kemppaulf aquaticmicrobialecology |