Toolbox for the analysis of motor dynamics during unrestrained behavior:
Saved in:
| Main Author: | |
|---|---|
| Format: | Thesis Book |
| Language: | English |
| Published: |
Freiburg im Breisgau
Juni 2022
|
| Subjects: | |
| Online Access: | Inhaltsverzeichnis Inhaltsverzeichnis |
| Item Description: | Enthält Zeitschriftenaufsätze |
| Physical Description: | VIII, 169 Seiten Illustrationen, Diagramme 30 cm |
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| 100 | 1 | |a Schneider, Artur |e Verfasser |0 (DE-588)1277980454 |4 aut | |
| 245 | 1 | 0 | |a Toolbox for the analysis of motor dynamics during unrestrained behavior |c vorgelegt von Artur Schneider |
| 264 | 1 | |a Freiburg im Breisgau |c Juni 2022 | |
| 300 | |a VIII, 169 Seiten |b Illustrationen, Diagramme |c 30 cm | ||
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| 500 | |a Enthält Zeitschriftenaufsätze | ||
| 502 | |b Dissertation |c Albert-Ludwigs-Universität Freiburg |d 2022 | ||
| 655 | 7 | |0 (DE-588)4113937-9 |a Hochschulschrift |2 gnd-content | |
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Record in the Search Index
| _version_ | 1804185092381212672 |
|---|---|
| adam_text | TABLE
OF
CONTENTS
ACKNOWLEDGEMENTS
I
LIST
OF
FIGURES
IV
ABBREVIATIONS
V
LIST
OF
PUBLICATIONS
VII
ABSTRACT
VIII
1
INTRODUCTION
1
1.1
MOTOR
SYSTEM
.................................................................................................................
2
1.1.1
ANATOMICAL
ORGANIZATION
...................................................................................
2
1.1.2
MOTOR
PLANNING,
POPULATION
ACTIVITY,
AND
NEURAL
DYNAMICS
.............................
6
1.1.3
MOVEMENT
SIGNALS
OUTSIDE
THE
MOTOR
SYSTEM
...................................................
7
1.2
MACHINE
LEARNING
IN
NEUROSCIENCE
.................................................................................
8
1.2.1
GENERAL
CONCEPTS
...............................................................................................
9
1.2.2
LINEAR
MODELS
.....................................................................................................
10
1.2.3
GENERALIZED
ADDITIVE
MODELS
.............................................................................
12
1.2.4
DIMENSIONALITY
REDUCTION
................................................................................
13
1.2.5
CLUSTERING
...........................................................................................................
16
1.2.6
SUPPORT
VECTOR
MACHINES
...................................................................................
17
1.2.7
DEEP
LEARNING
.....................................................................................................
17
1.3
MEASURING
MOVEMENT
.....................................................................................................
20
1.3.1
INDIRECT
MOVEMENT
READOUT
.............................................................................
20
1.3.2
VIDEOGRAPHY-BASED
METHODS
.............................................................................
22
1.3.3
POSE
ESTIMATION
USING
COMPUTER
VISION
............................................................
23
1.3.4
3D
TRACKING
........................................................................................................
24
1.3.5
BEHAVIORAL
DYNAMICS
.........................................................................................
25
1.4
RECORDING
NEURAL
ACTIVITY
-
ELECTROPHYSIOLOGY
............................................................
25
1.4.1
BASICS
OF
ELECTROPHYSIOLOGY
.............................................................................
26
1.4.2
DIFFERENT
TYPES
OF
ELECTRODES
AND
TECHNICAL
IMPLEMENTATIONS
........................
28
1.4.3
NOVEL
DEVELOPMENTS
IN
EXTRACELLULAR
ELECTROPHYSIOLOGY
.................................
29
1.4.4
SPIKE
SORTING
.....................................................................................................
31
1.5
MODULATING
NEURAL
ACTIVITY
-
OPTOGENETICS
..................................................................
32
1.5.1
OPSINS
.................................................................................................................
32
1.5.2
TARGETING
SPECIFIC
(SUB)POPULATIONS
OF
NEURONS
............................................
34
1.5.3
COMBINING
OPTOGENETICS
WITH
ELECTROPHYSIOLOGY
.............................................
37
1.5.4
TECHNICAL
CONSIDERATIONS
FOR
OPTOGENETICS
........................................................
38
1.6
AIMS
AND
OBJECTIVES
....................................................................................................
40
2
ARTICLES
48
2.1
REAL-TIME
NEUROFEEDBACK.
KARVAT
ET
AL.
(2020)
COMMUNICATIONS
BIOLOGY
..............
48
2.2
DISTINCT
DYNAMICS
IN
CORTEX.
ERIKSSON
ET
AL.
(2021)
NATURE
COMMUNICATIONS
....
50
2.3
FLUIDIC
PROBE.
SHARMA
ET
AL.
(2021)
JOURNAL
OF
NEURAL
ENGINEERING
.......................
52
2.4
ULTRA-CONTROLLED
NEURONAL
INTERROGATION.
ERIKSSON
ET
AL.
(2022)
NATURE
COMMUNICATIONS
54
2.5
FREIPOSE
AND
VIRTUAL
HEAD-FIXATION.
SCHNEIDER
ET
AL.
(2022)
NEURON
.......................
56
3
DISCUSSION
58
3.1
SUMMARY
.....................................................................................................................
58
3.2
OPTOGENETICS
AND
ELECTROPHYSIOLOGY
............................................................................
60
3.3
THE
ROLE
OF
MOTION
TRACKING
........................................................................................
62
3.4
TOWARDS
FEWER
CONSTRAINTS
IN
BEHAVIOR
......................................................................
67
3.5
MOVEMENT
REPRESENTATION
...........................................................................................
70
3.5.1
VIRTUAL
HEAD-FIXATION
.........................................................................................
71
3.6
OUTLOOK
-
UNRAVELING
BEHAVIORAL
FLEXIBILITY
................................................................
74
REFERENCES
77
ILLUSTRATIONS
REFERENCE
..........................................................................................................
84
4
APPENDIX
87
|
| adam_txt |
TABLE
OF
CONTENTS
ACKNOWLEDGEMENTS
I
LIST
OF
FIGURES
IV
ABBREVIATIONS
V
LIST
OF
PUBLICATIONS
VII
ABSTRACT
VIII
1
INTRODUCTION
1
1.1
MOTOR
SYSTEM
.
2
1.1.1
ANATOMICAL
ORGANIZATION
.
2
1.1.2
MOTOR
PLANNING,
POPULATION
ACTIVITY,
AND
NEURAL
DYNAMICS
.
6
1.1.3
MOVEMENT
SIGNALS
OUTSIDE
THE
MOTOR
SYSTEM
.
7
1.2
MACHINE
LEARNING
IN
NEUROSCIENCE
.
8
1.2.1
GENERAL
CONCEPTS
.
9
1.2.2
LINEAR
MODELS
.
10
1.2.3
GENERALIZED
ADDITIVE
MODELS
.
12
1.2.4
DIMENSIONALITY
REDUCTION
.
13
1.2.5
CLUSTERING
.
16
1.2.6
SUPPORT
VECTOR
MACHINES
.
17
1.2.7
DEEP
LEARNING
.
17
1.3
MEASURING
MOVEMENT
.
20
1.3.1
INDIRECT
MOVEMENT
READOUT
.
20
1.3.2
VIDEOGRAPHY-BASED
METHODS
.
22
1.3.3
POSE
ESTIMATION
USING
COMPUTER
VISION
.
23
1.3.4
3D
TRACKING
.
24
1.3.5
BEHAVIORAL
DYNAMICS
.
25
1.4
RECORDING
NEURAL
ACTIVITY
-
ELECTROPHYSIOLOGY
.
25
1.4.1
BASICS
OF
ELECTROPHYSIOLOGY
.
26
1.4.2
DIFFERENT
TYPES
OF
ELECTRODES
AND
TECHNICAL
IMPLEMENTATIONS
.
28
1.4.3
NOVEL
DEVELOPMENTS
IN
EXTRACELLULAR
ELECTROPHYSIOLOGY
.
29
1.4.4
SPIKE
SORTING
.
31
1.5
MODULATING
NEURAL
ACTIVITY
-
OPTOGENETICS
.
32
1.5.1
OPSINS
.
32
1.5.2
TARGETING
SPECIFIC
(SUB)POPULATIONS
OF
NEURONS
.
34
1.5.3
COMBINING
OPTOGENETICS
WITH
ELECTROPHYSIOLOGY
.
37
1.5.4
TECHNICAL
CONSIDERATIONS
FOR
OPTOGENETICS
.
38
1.6
AIMS
AND
OBJECTIVES
.
40
2
ARTICLES
48
2.1
REAL-TIME
NEUROFEEDBACK.
KARVAT
ET
AL.
(2020)
COMMUNICATIONS
BIOLOGY
.
48
2.2
DISTINCT
DYNAMICS
IN
CORTEX.
ERIKSSON
ET
AL.
(2021)
NATURE
COMMUNICATIONS
.
50
2.3
FLUIDIC
PROBE.
SHARMA
ET
AL.
(2021)
JOURNAL
OF
NEURAL
ENGINEERING
.
52
2.4
ULTRA-CONTROLLED
NEURONAL
INTERROGATION.
ERIKSSON
ET
AL.
(2022)
NATURE
COMMUNICATIONS
54
2.5
FREIPOSE
AND
VIRTUAL
HEAD-FIXATION.
SCHNEIDER
ET
AL.
(2022)
NEURON
.
56
3
DISCUSSION
58
3.1
SUMMARY
.
58
3.2
OPTOGENETICS
AND
ELECTROPHYSIOLOGY
.
60
3.3
THE
ROLE
OF
MOTION
TRACKING
.
62
3.4
TOWARDS
FEWER
CONSTRAINTS
IN
BEHAVIOR
.
67
3.5
MOVEMENT
REPRESENTATION
.
70
3.5.1
VIRTUAL
HEAD-FIXATION
.
71
3.6
OUTLOOK
-
UNRAVELING
BEHAVIORAL
FLEXIBILITY
.
74
REFERENCES
77
ILLUSTRATIONS
REFERENCE
.
84
4
APPENDIX
87 |
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| author_GND | (DE-588)1277980454 |
| author_facet | Schneider, Artur |
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| illustrated | Illustrated |
| index_date | 2024-07-03T21:54:41Z |
| indexdate | 2024-07-10T09:49:44Z |
| institution | BVB |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-034180266 |
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| open_access_boolean | |
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| owner_facet | DE-355 DE-BY-UBR |
| physical | VIII, 169 Seiten Illustrationen, Diagramme 30 cm |
| publishDate | 2022 |
| publishDateSearch | 2022 |
| publishDateSort | 2022 |
| record_format | marc |
| spelling | Schneider, Artur Verfasser (DE-588)1277980454 aut Toolbox for the analysis of motor dynamics during unrestrained behavior vorgelegt von Artur Schneider Freiburg im Breisgau Juni 2022 VIII, 169 Seiten Illustrationen, Diagramme 30 cm txt rdacontent n rdamedia nc rdacarrier Enthält Zeitschriftenaufsätze Dissertation Albert-Ludwigs-Universität Freiburg 2022 (DE-588)4113937-9 Hochschulschrift gnd-content B:DE-101 application/pdf https://d-nb.info/1280258012/04 Inhaltsverzeichnis DNB Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=034180266&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis 1\p emakn 0,17521 20230213 DE-101 https://d-nb.info/provenance/plan#emakn 2\p dnb 20230215 DE-101 https://d-nb.info/provenance/plan#dnb 3\p dnb 20230215 DE-101 https://d-nb.info/provenance/plan#dnb |
| spellingShingle | Schneider, Artur Toolbox for the analysis of motor dynamics during unrestrained behavior |
| subject_GND | (DE-588)4113937-9 |
| title | Toolbox for the analysis of motor dynamics during unrestrained behavior |
| title_auth | Toolbox for the analysis of motor dynamics during unrestrained behavior |
| title_exact_search | Toolbox for the analysis of motor dynamics during unrestrained behavior |
| title_exact_search_txtP | Toolbox for the analysis of motor dynamics during unrestrained behavior |
| title_full | Toolbox for the analysis of motor dynamics during unrestrained behavior vorgelegt von Artur Schneider |
| title_fullStr | Toolbox for the analysis of motor dynamics during unrestrained behavior vorgelegt von Artur Schneider |
| title_full_unstemmed | Toolbox for the analysis of motor dynamics during unrestrained behavior vorgelegt von Artur Schneider |
| title_short | Toolbox for the analysis of motor dynamics during unrestrained behavior |
| title_sort | toolbox for the analysis of motor dynamics during unrestrained behavior |
| topic_facet | Hochschulschrift |
| url | https://d-nb.info/1280258012/04 http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=034180266&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
| work_keys_str_mv | AT schneiderartur toolboxfortheanalysisofmotordynamicsduringunrestrainedbehavior |
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