Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics:
Saved in:
| Main Author: | |
|---|---|
| Format: | Thesis Book |
| Language: | English |
| Published: |
Tübingen
2020
|
| Subjects: | |
| Online Access: | Inhaltsverzeichnis Inhaltsverzeichnis |
| Physical Description: | VIII, 110 Seiten Illustrationen, Diagramme 21 cm |
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MARC
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| 100 | 1 | |a Simeonov, Stefan |d 1988- |e Verfasser |0 (DE-588)1216841144 |4 aut | |
| 245 | 1 | 0 | |a Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics |c vorgelegt von Stefan Simeonov |
| 264 | 1 | |a Tübingen |c 2020 | |
| 300 | |a VIII, 110 Seiten |b Illustrationen, Diagramme |c 21 cm | ||
| 336 | |b txt |2 rdacontent | ||
| 337 | |b n |2 rdamedia | ||
| 338 | |b nc |2 rdacarrier | ||
| 502 | |b Dissertation |c Eberhard Karls Universität Tübingen |d 2020 | ||
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Record in the Search Index
| _version_ | 1804182083641278464 |
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| adam_text | CONTENTS
1
INTRODUCTION
1
2
BACKGROUND
I
5
2.1
FUNDAMENTALS
OF
SCANNING
ION
CONDUCTANCE
MICROSCOPY
(SICM)
............
5
2.2
TOPOGRAPHY
IMAGING
IN
SICM
...................................................................
6
2.2.1
ION
CURRENT
IS
USED
AS
A
MEASURE
FOR
PIPETTE-SAMPLE
DISTANCE
.
.
6
2.2.2
NOISE
SOURCES
IN
SICM
...................................................................
7
2.2.3
CONSTANT
CURRENT
MODE
...................................................................
8
2.2.4
^-MODULATION
MODE
.........................................................................
9
2.2.5
HOPPING
MODE
..................................................................................
10
2.3
CELL
STRUCTURE
AND
MORPHOLOGY
...................................................................
11
3
MORPHOLOGICAL
ANALYSIS
OF
MACROPHAGES
DURING
HCMV
OR
HIV
INFECTION
13
3.1
HCMV
AND
HIV
INFECTION
OF
MACROPHAGES
.............................................
13
3.2
MATERIALS
AND
METHODS
...............................................................................
15
3.2.1
EXPERIMENTAL
SETUP
.........................................................................
15
3.2.2
CELL
CULTURE
AND
SAMPLE
PREPARATION
.............................................
15
3.2.3
OPTIMIZATION
OF
THE
LOCAL
HOP
DISTANCE
INCREASES
SICM
IMAGING
SPEED
BY
A
FACTOR
OF
3
......................................................................
16
3.2.4
ROUGHNESS
ANALYSIS
.........................................................................
18
3.3
RESULTS
..........................................................................................................
23
3.3.1
HCMV
INDUCES
MORPHOLOGICAL
ANOMALIES
OF
MACROPHAGES
....
23
3.3.2
MACROPHAGE
MORPHOLOGY
REMAINS
UNALTERED
BY
HIV
INFECTION
.
.
25
3.4
CONCLUSION
....................................................................................................
27
4
ULTRAFAST
IMAGING
OF
CARDIOMYOCYTE
CONTRACTIONS
BY
COMBINING
SICM
WITH
MEA
29
4.1
MOTIVATION
FOR
COMBINING
SICM
WITH
MICROELECTRODE
ARRAYS
....................
31
4.2
BRIEF
INTRODUCTION
........................................................................................
33
4.2.1
CARDIOMYOCYTES
...............................................................................
33
4.2.2
RECORDING
ELECTROPHYSIOLOGICAL
SIGNALS
BY
MICROELECTRODES
....
36
4.3
MATERIALS
AND
METHODS
...............................................................................
37
4.3.1
EXPERIMENTAL
SETUP
........................................................................
37
4.3.2
CELL
CULTURE
AND
SAMPLE
PREPARATION
.............................................
37
4.3.3
DATA
ACQUISITION
AND
ANALYSIS
......................................................
38
4.4
RESULTS
AND
DISCUSSION
..............................................................................
40
4.4.1
CONSTRUCTION
OF
A
COMBINED
MEA-SICM
SETUP
............................
40
4.4.2
COMBINED
MEA-SICM
OPERATION
AND
DATA
CORRECTION
...............
40
4.4.3
COMBINED
MEA-SICM
ALLOWS
TIME-SYNCHRONIZATION
OF
THE
CAR
DIOMYOCYTE
SURFACE
DISPLACEMENT
RECORDED
AT
MANY POSITIONS
DUR
ING
CONTRACTIONS
...............................................................................
44
4.4.4
ULTRAFAST
IMAGING
OF
CARDIOMYOCYTE
CONTRACTIONS
........................
47
4.4.5
BLEBBISTATIN
GRADUALLY
DECREASES
THE
CONTRACTILE
ACTIVITY
OF
HL-1
CELLS
..........................................................................................
51
4.5
CONCLUSION
.....................................................................................................
53
5
HIGH-SPEED
SICM
FOR
SUB-SECOND
TOPOGRAPHY
IMAGING
OF
LIVE
CELLS
55
5.1
MOTIVATION
FOR
HS-SICM
............................................................................
57
5.2
MATERIALS
AND
METHODS
...............................................................................
58
5.2.1
EXPERIMENTAL
SETUPS
..............................................................
58
5.2.2
IMAGING
PARAMETERS
.................................................................
59
5.2.3
CELL
CULTURE
AND
SAMPLE
PREPARATION
...............................................
59
5.2.4
DATA
ANALYSIS
AND
STATISTICS
..................................................
60
5.3
RESULTS
AND
DISCUSSION
...............................................................................
61
5.3.1
OVERSHOOT
SETS
LOWER
LIMIT
FOR
SICM
IMAGE
ACQUISITION
TIME
...
61
5.3.2
DESIGN
AND
CONSTRUCTION
OF
A
HS-SICM
SETUP
.......................
62
5.3.3
WIDE-BAND
ION
CURRENT
DETECTION
REDUCES
OVERSHOOT
...........
66
5.3.4
HOPPING
MODE
WITH
TURN
STEP
PROTOCOL
REDUCES
OVERSHOOT
...
74
5.3.5
OPTIMIZATION
OF
THE
CULTURE
DISH
SIZE
ENABLES
HIGH-SPEED
LIVE
CELL
IMAGING
..............................................................................................
78
5.3.6
CHARACTERIZATION
OF
THE
HS-SICM
SETUP
................................
80
5.3.7
LIVE
CELL
IMAGING
USING
HS-SICM
....................................................
83
5.4
CONCLUSION
....................................................................................................
87
6
CRITICAL
POINT
OF
VIEW
AND
OUTLOOK
89
6.1
PRESCAN-BASED
LOCAL
HOP
DISTANCE
OPTIMIZATION
........................................
89
6.2
COMBINED
MEA-SICM
SETUP
FOR
MILLISECOND
TOPOGRAPHY
IMAGING
OF
CON
TRACTING
CARDIOMYOCYTES
...................................................................
90
6.3
HS-SICM
SETUP
FOR
SUB-SECOND
TOPOGRAPHY
IMAGING
OF
LIVE
CELLS
............
90
BIBLIOGRAPHY
93
CURRICULUM
VITAE
109
LIST
OF
PUBLICATIONS
110
VIII
|
| adam_txt |
CONTENTS
1
INTRODUCTION
1
2
BACKGROUND
I
5
2.1
FUNDAMENTALS
OF
SCANNING
ION
CONDUCTANCE
MICROSCOPY
(SICM)
.
5
2.2
TOPOGRAPHY
IMAGING
IN
SICM
.
6
2.2.1
ION
CURRENT
IS
USED
AS
A
MEASURE
FOR
PIPETTE-SAMPLE
DISTANCE
.
.
6
2.2.2
NOISE
SOURCES
IN
SICM
.
7
2.2.3
CONSTANT
CURRENT
MODE
.
8
2.2.4
^-MODULATION
MODE
.
9
2.2.5
HOPPING
MODE
.
10
2.3
CELL
STRUCTURE
AND
MORPHOLOGY
.
11
3
MORPHOLOGICAL
ANALYSIS
OF
MACROPHAGES
DURING
HCMV
OR
HIV
INFECTION
13
3.1
HCMV
AND
HIV
INFECTION
OF
MACROPHAGES
.
13
3.2
MATERIALS
AND
METHODS
.
15
3.2.1
EXPERIMENTAL
SETUP
.
15
3.2.2
CELL
CULTURE
AND
SAMPLE
PREPARATION
.
15
3.2.3
OPTIMIZATION
OF
THE
LOCAL
HOP
DISTANCE
INCREASES
SICM
IMAGING
SPEED
BY
A
FACTOR
OF
3
.
16
3.2.4
ROUGHNESS
ANALYSIS
.
18
3.3
RESULTS
.
23
3.3.1
HCMV
INDUCES
MORPHOLOGICAL
ANOMALIES
OF
MACROPHAGES
.
23
3.3.2
MACROPHAGE
MORPHOLOGY
REMAINS
UNALTERED
BY
HIV
INFECTION
.
.
25
3.4
CONCLUSION
.
27
4
ULTRAFAST
IMAGING
OF
CARDIOMYOCYTE
CONTRACTIONS
BY
COMBINING
SICM
WITH
MEA
29
4.1
MOTIVATION
FOR
COMBINING
SICM
WITH
MICROELECTRODE
ARRAYS
.
31
4.2
BRIEF
INTRODUCTION
.
33
4.2.1
CARDIOMYOCYTES
.
33
4.2.2
RECORDING
ELECTROPHYSIOLOGICAL
SIGNALS
BY
MICROELECTRODES
.
36
4.3
MATERIALS
AND
METHODS
.
37
4.3.1
EXPERIMENTAL
SETUP
.
37
4.3.2
CELL
CULTURE
AND
SAMPLE
PREPARATION
.
37
4.3.3
DATA
ACQUISITION
AND
ANALYSIS
.
38
4.4
RESULTS
AND
DISCUSSION
.
40
4.4.1
CONSTRUCTION
OF
A
COMBINED
MEA-SICM
SETUP
.
40
4.4.2
COMBINED
MEA-SICM
OPERATION
AND
DATA
CORRECTION
.
40
4.4.3
COMBINED
MEA-SICM
ALLOWS
TIME-SYNCHRONIZATION
OF
THE
CAR
DIOMYOCYTE
SURFACE
DISPLACEMENT
RECORDED
AT
MANY POSITIONS
DUR
ING
CONTRACTIONS
.
44
4.4.4
ULTRAFAST
IMAGING
OF
CARDIOMYOCYTE
CONTRACTIONS
.
47
4.4.5
BLEBBISTATIN
GRADUALLY
DECREASES
THE
CONTRACTILE
ACTIVITY
OF
HL-1
CELLS
.
51
4.5
CONCLUSION
.
53
5
HIGH-SPEED
SICM
FOR
SUB-SECOND
TOPOGRAPHY
IMAGING
OF
LIVE
CELLS
55
5.1
MOTIVATION
FOR
HS-SICM
.
57
5.2
MATERIALS
AND
METHODS
.
58
5.2.1
EXPERIMENTAL
SETUPS
.
58
5.2.2
IMAGING
PARAMETERS
.
59
5.2.3
CELL
CULTURE
AND
SAMPLE
PREPARATION
.
59
5.2.4
DATA
ANALYSIS
AND
STATISTICS
.
60
5.3
RESULTS
AND
DISCUSSION
.
61
5.3.1
OVERSHOOT
SETS
LOWER
LIMIT
FOR
SICM
IMAGE
ACQUISITION
TIME
.
61
5.3.2
DESIGN
AND
CONSTRUCTION
OF
A
HS-SICM
SETUP
.
62
5.3.3
WIDE-BAND
ION
CURRENT
DETECTION
REDUCES
OVERSHOOT
.
66
5.3.4
HOPPING
MODE
WITH
"TURN
STEP"
PROTOCOL
REDUCES
OVERSHOOT
.
74
5.3.5
OPTIMIZATION
OF
THE
CULTURE
DISH
SIZE
ENABLES
HIGH-SPEED
LIVE
CELL
IMAGING
.
78
5.3.6
CHARACTERIZATION
OF
THE
HS-SICM
SETUP
.
80
5.3.7
LIVE
CELL
IMAGING
USING
HS-SICM
.
83
5.4
CONCLUSION
.
87
6
CRITICAL
POINT
OF
VIEW
AND
OUTLOOK
89
6.1
PRESCAN-BASED
LOCAL
HOP
DISTANCE
OPTIMIZATION
.
89
6.2
COMBINED
MEA-SICM
SETUP
FOR
MILLISECOND
TOPOGRAPHY
IMAGING
OF
CON
TRACTING
CARDIOMYOCYTES
.
90
6.3
HS-SICM
SETUP
FOR
SUB-SECOND
TOPOGRAPHY
IMAGING
OF
LIVE
CELLS
.
90
BIBLIOGRAPHY
93
CURRICULUM
VITAE
109
LIST
OF
PUBLICATIONS
110
VIII |
| any_adam_object | 1 |
| any_adam_object_boolean | 1 |
| author | Simeonov, Stefan 1988- |
| author_GND | (DE-588)1216841144 |
| author_facet | Simeonov, Stefan 1988- |
| author_role | aut |
| author_sort | Simeonov, Stefan 1988- |
| author_variant | s s ss |
| building | Verbundindex |
| bvnumber | BV047076618 |
| ctrlnum | (OCoLC)1196228813 (DE-599)KXP1728074258 |
| discipline | Physik Medizin |
| discipline_str_mv | Physik Medizin |
| format | Thesis Book |
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| genre | (DE-588)4113937-9 Hochschulschrift gnd-content |
| genre_facet | Hochschulschrift |
| id | DE-604.BV047076618 |
| illustrated | Illustrated |
| index_date | 2024-07-03T16:14:54Z |
| indexdate | 2024-07-10T09:01:55Z |
| institution | BVB |
| institution_GND | (DE-588)36187-2 |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-032483558 |
| oclc_num | 1196228813 |
| open_access_boolean | |
| owner | DE-29T |
| owner_facet | DE-29T |
| physical | VIII, 110 Seiten Illustrationen, Diagramme 21 cm |
| publishDate | 2020 |
| publishDateSearch | 2020 |
| publishDateSort | 2020 |
| record_format | marc |
| spelling | Simeonov, Stefan 1988- Verfasser (DE-588)1216841144 aut Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics vorgelegt von Stefan Simeonov Tübingen 2020 VIII, 110 Seiten Illustrationen, Diagramme 21 cm txt rdacontent n rdamedia nc rdacarrier Dissertation Eberhard Karls Universität Tübingen 2020 Zelle (DE-588)4067537-3 gnd rswk-swf In vivo (DE-588)4250700-5 gnd rswk-swf Bildgebendes Verfahren (DE-588)4006617-4 gnd rswk-swf Rasterionenleitwertmikroskop (DE-588)4699532-8 gnd rswk-swf (DE-588)4113937-9 Hochschulschrift gnd-content Rasterionenleitwertmikroskop (DE-588)4699532-8 s Bildgebendes Verfahren (DE-588)4006617-4 s In vivo (DE-588)4250700-5 s Zelle (DE-588)4067537-3 s DE-604 Eberhard Karls Universität Tübingen (DE-588)36187-2 dgg B:DE-101 application/pdf https://d-nb.info/1218084456/04 Inhaltsverzeichnis DNB Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=032483558&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis 1\p aepkn 0,89424 20201002 DE-101 https://d-nb.info/provenance/plan#aepkn 2\p dnb 20201016 DE-101 https://d-nb.info/provenance/plan#dnb 3\p dnb 20201016 DE-101 https://d-nb.info/provenance/plan#dnb |
| spellingShingle | Simeonov, Stefan 1988- Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics Zelle (DE-588)4067537-3 gnd In vivo (DE-588)4250700-5 gnd Bildgebendes Verfahren (DE-588)4006617-4 gnd Rasterionenleitwertmikroskop (DE-588)4699532-8 gnd |
| subject_GND | (DE-588)4067537-3 (DE-588)4250700-5 (DE-588)4006617-4 (DE-588)4699532-8 (DE-588)4113937-9 |
| title | Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics |
| title_auth | Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics |
| title_exact_search | Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics |
| title_exact_search_txtP | Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics |
| title_full | Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics vorgelegt von Stefan Simeonov |
| title_fullStr | Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics vorgelegt von Stefan Simeonov |
| title_full_unstemmed | Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics vorgelegt von Stefan Simeonov |
| title_short | Advances in scanning ion conductance microscopy for high-speed topography imaging of live cell dynamics |
| title_sort | advances in scanning ion conductance microscopy for high speed topography imaging of live cell dynamics |
| topic | Zelle (DE-588)4067537-3 gnd In vivo (DE-588)4250700-5 gnd Bildgebendes Verfahren (DE-588)4006617-4 gnd Rasterionenleitwertmikroskop (DE-588)4699532-8 gnd |
| topic_facet | Zelle In vivo Bildgebendes Verfahren Rasterionenleitwertmikroskop Hochschulschrift |
| url | https://d-nb.info/1218084456/04 http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=032483558&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
| work_keys_str_mv | AT simeonovstefan advancesinscanningionconductancemicroscopyforhighspeedtopographyimagingoflivecelldynamics AT eberhardkarlsuniversitattubingen advancesinscanningionconductancemicroscopyforhighspeedtopographyimagingoflivecelldynamics |
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