Genomic Perl: from bioinformatics basics to working code
This introduction to computational molecular biology will help programmers and biologists learn the skills needed to start work in this important, expanding field. The author explains many of the basic computational problems and gives concise, working programs to solve them in the Perl programming l...
Gespeichert in:
| 1. Verfasser: | |
|---|---|
| Format: | Elektronisch E-Book |
| Sprache: | English |
| Veröffentlicht: |
Cambridge
Cambridge University Press
2003
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| Schlagworte: | |
| Online-Zugang: | BSB01 FHN01 Volltext |
| Zusammenfassung: | This introduction to computational molecular biology will help programmers and biologists learn the skills needed to start work in this important, expanding field. The author explains many of the basic computational problems and gives concise, working programs to solve them in the Perl programming language. With minimal prerequisites, the author explains the biological background for each problem, develops a model for the solution, then introduces the Perl concepts needed to implement the solution. The book covers pairwise and multiple sequence alignment, fast database searches for homologous sequences, protein motif identification, genome rearrangement, physical mapping, phylogeny reconstruction, satellite identification, sequence assembly, gene finding, and RNA secondary structure. The concrete examples and step-by-step approach make it easy to grasp the computational and statistical methods, including dynamic programming, branch-and-bound optimization, greedy methods, maximum likelihood methods, substitution matrices, BLAST searching, and Karlin-Altschul statistics. Perl code is provided on the accompanying CD. |
| Beschreibung: | Title from publisher's bibliographic system (viewed on 05 Oct 2015) |
| Beschreibung: | 1 online resource (xvii, 334 pages) |
| ISBN: | 9781139164764 |
| DOI: | 10.1017/CBO9781139164764 |
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Datensatz im Suchindex
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|---|---|
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| author | Dwyer, Rex A. |
| author_facet | Dwyer, Rex A. |
| author_role | aut |
| author_sort | Dwyer, Rex A. |
| author_variant | r a d ra rad |
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| dewey-full | 572.80285 |
| dewey-hundreds | 500 - Natural sciences and mathematics |
| dewey-ones | 572 - Biochemistry |
| dewey-raw | 572.80285 |
| dewey-search | 572.80285 |
| dewey-sort | 3572.80285 |
| dewey-tens | 570 - Biology |
| discipline | Biologie |
| doi_str_mv | 10.1017/CBO9781139164764 |
| format | Electronic eBook |
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| id | DE-604.BV043943981 |
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| indexdate | 2024-07-10T07:39:20Z |
| institution | BVB |
| isbn | 9781139164764 |
| language | English |
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| publisher | Cambridge University Press |
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| spelling | Dwyer, Rex A. Verfasser aut Genomic Perl from bioinformatics basics to working code Rex A. Dwyer Cambridge Cambridge University Press 2003 1 online resource (xvii, 334 pages) txt rdacontent c rdamedia cr rdacarrier Title from publisher's bibliographic system (viewed on 05 Oct 2015) This introduction to computational molecular biology will help programmers and biologists learn the skills needed to start work in this important, expanding field. The author explains many of the basic computational problems and gives concise, working programs to solve them in the Perl programming language. With minimal prerequisites, the author explains the biological background for each problem, develops a model for the solution, then introduces the Perl concepts needed to implement the solution. The book covers pairwise and multiple sequence alignment, fast database searches for homologous sequences, protein motif identification, genome rearrangement, physical mapping, phylogeny reconstruction, satellite identification, sequence assembly, gene finding, and RNA secondary structure. The concrete examples and step-by-step approach make it easy to grasp the computational and statistical methods, including dynamic programming, branch-and-bound optimization, greedy methods, maximum likelihood methods, substitution matrices, BLAST searching, and Karlin-Altschul statistics. Perl code is provided on the accompanying CD. Datenverarbeitung Perl (Computer program language) Molecular biology / Data processing Bioinformatics Perl Programmiersprache (DE-588)4307836-9 gnd rswk-swf Molekulare Bioinformatik (DE-588)4531334-9 gnd rswk-swf Perl (DE-588)4102974-4 gnd rswk-swf Molekulare Bioinformatik (DE-588)4531334-9 s Perl (DE-588)4102974-4 g 1\p DE-604 Perl Programmiersprache (DE-588)4307836-9 s 2\p DE-604 Erscheint auch als Druckausgabe 978-0-521-80177-5 https://doi.org/10.1017/CBO9781139164764 Verlag URL des Erstveröffentlichers Volltext 1\p cgwrk 20201028 DE-101 https://d-nb.info/provenance/plan#cgwrk 2\p cgwrk 20201028 DE-101 https://d-nb.info/provenance/plan#cgwrk |
| spellingShingle | Dwyer, Rex A. Genomic Perl from bioinformatics basics to working code Datenverarbeitung Perl (Computer program language) Molecular biology / Data processing Bioinformatics Perl Programmiersprache (DE-588)4307836-9 gnd Molekulare Bioinformatik (DE-588)4531334-9 gnd |
| subject_GND | (DE-588)4307836-9 (DE-588)4531334-9 (DE-588)4102974-4 |
| title | Genomic Perl from bioinformatics basics to working code |
| title_auth | Genomic Perl from bioinformatics basics to working code |
| title_exact_search | Genomic Perl from bioinformatics basics to working code |
| title_full | Genomic Perl from bioinformatics basics to working code Rex A. Dwyer |
| title_fullStr | Genomic Perl from bioinformatics basics to working code Rex A. Dwyer |
| title_full_unstemmed | Genomic Perl from bioinformatics basics to working code Rex A. Dwyer |
| title_short | Genomic Perl |
| title_sort | genomic perl from bioinformatics basics to working code |
| title_sub | from bioinformatics basics to working code |
| topic | Datenverarbeitung Perl (Computer program language) Molecular biology / Data processing Bioinformatics Perl Programmiersprache (DE-588)4307836-9 gnd Molekulare Bioinformatik (DE-588)4531334-9 gnd |
| topic_facet | Datenverarbeitung Perl (Computer program language) Molecular biology / Data processing Bioinformatics Perl Programmiersprache Molekulare Bioinformatik Perl |
| url | https://doi.org/10.1017/CBO9781139164764 |
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