Computational systems bioinformatics: CSB2006 conference proceedings, Stanford CA, 14-18 August 2006
Gespeichert in:
| Körperschaft: | |
|---|---|
| Format: | Elektronisch E-Book |
| Sprache: | English |
| Veröffentlicht: |
London
Imperial College Press
c2006
|
| Schriftenreihe: | Series on advances in bioinformatics and computational biology
v. 4 |
| Schlagworte: | |
| Online-Zugang: | FAW01 FAW02 Volltext |
| Beschreibung: | "Fifth Annual Computational Systems Bioinformatics Conference, CSB2006"--P. [v]. - Sponsored by Hewlett-Packard Company and Microsoft Research--p. [v]. - Previous CSB Conference (4th) held in Stanford, Calif. Aug. 8-11, 2005 (IEEE Computer Society Bioinformatics Conference) Includes bibliographical references and index Committees -- Referees -- Preface -- Keynote Addresses. Exploring the ocean's microbes: sequencing the seven seas / Marvin E. Frazier ... [et al.]. Don't know much about philosophy: the confusion over bio-ontologies / Mark A. Musen -- Invited talks. Biomedical Informatics Research Network (BIRN): building a national collaboratory for bioMedical and brain research / Mark H. Ellisman. Protein network comparative genomics / Trey Ideker. Systems biology in two dimensions: understanding and engineering membranes as dynamical systems / Erik Jakobsson. Bioinformatics at Microsoft Research / Simon Mercer. Movie crunching in biological dynamic imaging / Jean-Christophe Olivo-Marin. Engineering nucleic acid-based molecular sensors for probing and programming cellular systems / Christina D. Smolke. Reactome: a knowledgebase of biological pathways / Lincoln Stein ... [et al.] -- - Structural bioinformatics. Effective optimization algorithms for fragment-assembly based protein structure prediction / Kevin W. DeRonne and George Karypis. Transmembrane helix and topology prediction using hierarchical SVM classifiers and an alternating geometric scoring function / Allan Lo ... [et al.]. Protein fold recognition using the gradient boost algorithm / Feng Jiao ... [et al.]. A graph-based automated NMR backbone resonance sequential assignment / Xiang Wan and Guohui Lin. A data-driven, systematic search algorithm for structure determination of denatured or disordered proteins / Lincong Wang and Bruce Randall Donald. Multiple structure alignment by optimal RMSD implies that the average structure is a consensus / Xueyi Wang and Jack Snoeyink. Identification of ?-Helices from low resolution protein density maps / Alessandro Dal Palu ... [et al.]. Efficient annotation of non-coding RNA structures including pseudoknots via automated filters / Chunmei Liu ... [et al.]. - Thermodynamic matchers: strengthening the significance of RNA folding energies / Thomas Hochsmann, Matthias Hochsmann and Robert Giegerich -- Microarray data analysis and applications. PEM: a general statistical approach for identifying differentially expressed genes in time-course cDNA microarray experiment without replicate / Xu Han, Wing-Kin Sung and Lin Feng. Efficient generalized matrix approximations for biomarker discovery and visualization in gene expression data / Wenyuan Li ... [et al.] -- - Computational genomics and genetics. Efficient computation of minimum recombination with genotypes (not haplotypes) / Yufeng Wu and Dan Gusfield. Sorting genomes by translocations and deletions / Xingqin Qi ... [et al.]. Turning repeats to advantage: scaffolding genomic contigs using LTR retrotransposons / Ananth Kalyanaraman, Srinivas Aluru and Patrick S. Schnable. Whole genome composition distance for HIV-1 genotyping / Xiaomeng Wu ... [et al.]. Efficient recursive linking algorithm for computing the likelihood of an order of a large number of generic markers / S. Tewari, S. M. Bhandarkar and J. Arnold. Optimal Imperfect Phylogeny Reconstruction and Haplotyping (IPPH) / Srinath Sridhar ... [et al.]. Toward an algebraic understanding of haplotype inference by pure parsimony / Daniel G. Brown and Ian M. Harrower. Global correlation analysis between redundant probe sets using a large collection of Arabidopsis ATH1 expression profiling data / Xiangqin Cui and Ann Loraine -- - Motif sequence identification. Distance-based identification of structure motifs in proteins using constrained frequent subgraph mining / Jun Huan ... [et al.]. An improved Gibbs sampling method for motif discovery via sequence weighting / Xin Chen and Tao Jiang. Detection of cleavage sites for HIV-1 protease in native proteins / Liwen You. A methodology for motif discovery employing iterated cluster re-assignment / Osman Abul, Finn Drabls and Geir Kjetil Sandve -- - Biological pathways and systems. Identifying biological pathways via phase decomposition and profile extraction / Yi Zhang and Zhidong Deng. Expectation-maximization algorithms for fuzzy assignment of genes to cellular pathways / Liviu Popescu and Golan Yona. Classification of Drosophila embryonic developmental stage range based on gene expression pattern images / Jieping Ye ... [et al.]. Evolution versus "intelligent design": comparing the topology of protein-protein interaction networks to the internet / Qiaofeng Yang ... [et al.] -- - Protein functions and computational proteomics. Cavity-aware motifs reduce false positives in protein function prediction / Brian Y. Chen ... [et al.]. Protein subcellular localization prediction based on compartment-specific biological features / Chia-Yu Su ... [et al.]. Predicting the binding affinity of MHC class II peptides / Fatih Altiparmak, Altuna Akalin and Hakan Ferhatosmanoglu. Codon-based detection of positive selection can be biased by heterogeneous distribution of polar amino acids along protein sequences / Xuhua Xia and Sudhir Kumar. Bayesian data integration: a functional perspective / Curtis Huttenhower and Olga G. Troyanskaya. An iterative algorithm to quantify the factors influencing peptide fragmentation for MS/MS spectrum / Chungong Yu ... [et al.]. Complexity and scoring function of MS/MS Peptide De Novo sequencing / Changjiang Xu and Bin Ma -- - Biomedical applications. Expectation-maximization method for reconstructing tumor phylogenies from single-cell data / Gregory Pennington ... [et al.]. Simulating in vitro epithelial morphogenesis in multiple environments / Mark R. Grant, Sean H. J. Kim and C. Anthony Hunt. A combined data mining approach for infrequent events: analyzing HIV mutation changes based on treatment history / Ray S. Lin ... [et al.]. A systems biology case study of ovarian cancer drug resistance / Jake Y. Chen ... [et al.] |
| Beschreibung: | 1 Online-Ressource (xvi, 400 p.) |
| ISBN: | 186094700X 1860947573 9781860947001 9781860947575 |
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| 500 | |a Includes bibliographical references and index | ||
| 500 | |a Committees -- Referees -- Preface -- Keynote Addresses. Exploring the ocean's microbes: sequencing the seven seas / Marvin E. Frazier ... [et al.]. Don't know much about philosophy: the confusion over bio-ontologies / Mark A. Musen -- Invited talks. Biomedical Informatics Research Network (BIRN): building a national collaboratory for bioMedical and brain research / Mark H. Ellisman. Protein network comparative genomics / Trey Ideker. Systems biology in two dimensions: understanding and engineering membranes as dynamical systems / Erik Jakobsson. Bioinformatics at Microsoft Research / Simon Mercer. Movie crunching in biological dynamic imaging / Jean-Christophe Olivo-Marin. Engineering nucleic acid-based molecular sensors for probing and programming cellular systems / Christina D. Smolke. Reactome: a knowledgebase of biological pathways / Lincoln Stein ... [et al.] -- | ||
| 500 | |a - Structural bioinformatics. Effective optimization algorithms for fragment-assembly based protein structure prediction / Kevin W. DeRonne and George Karypis. Transmembrane helix and topology prediction using hierarchical SVM classifiers and an alternating geometric scoring function / Allan Lo ... [et al.]. Protein fold recognition using the gradient boost algorithm / Feng Jiao ... [et al.]. A graph-based automated NMR backbone resonance sequential assignment / Xiang Wan and Guohui Lin. A data-driven, systematic search algorithm for structure determination of denatured or disordered proteins / Lincong Wang and Bruce Randall Donald. Multiple structure alignment by optimal RMSD implies that the average structure is a consensus / Xueyi Wang and Jack Snoeyink. Identification of ?-Helices from low resolution protein density maps / Alessandro Dal Palu ... [et al.]. Efficient annotation of non-coding RNA structures including pseudoknots via automated filters / Chunmei Liu ... [et al.]. | ||
| 500 | |a - Thermodynamic matchers: strengthening the significance of RNA folding energies / Thomas Hochsmann, Matthias Hochsmann and Robert Giegerich -- Microarray data analysis and applications. PEM: a general statistical approach for identifying differentially expressed genes in time-course cDNA microarray experiment without replicate / Xu Han, Wing-Kin Sung and Lin Feng. Efficient generalized matrix approximations for biomarker discovery and visualization in gene expression data / Wenyuan Li ... [et al.] -- | ||
| 500 | |a - Computational genomics and genetics. Efficient computation of minimum recombination with genotypes (not haplotypes) / Yufeng Wu and Dan Gusfield. Sorting genomes by translocations and deletions / Xingqin Qi ... [et al.]. Turning repeats to advantage: scaffolding genomic contigs using LTR retrotransposons / Ananth Kalyanaraman, Srinivas Aluru and Patrick S. Schnable. Whole genome composition distance for HIV-1 genotyping / Xiaomeng Wu ... [et al.]. Efficient recursive linking algorithm for computing the likelihood of an order of a large number of generic markers / S. Tewari, S. M. Bhandarkar and J. Arnold. Optimal Imperfect Phylogeny Reconstruction and Haplotyping (IPPH) / Srinath Sridhar ... [et al.]. Toward an algebraic understanding of haplotype inference by pure parsimony / Daniel G. Brown and Ian M. Harrower. Global correlation analysis between redundant probe sets using a large collection of Arabidopsis ATH1 expression profiling data / Xiangqin Cui and Ann Loraine -- | ||
| 500 | |a - Motif sequence identification. Distance-based identification of structure motifs in proteins using constrained frequent subgraph mining / Jun Huan ... [et al.]. An improved Gibbs sampling method for motif discovery via sequence weighting / Xin Chen and Tao Jiang. Detection of cleavage sites for HIV-1 protease in native proteins / Liwen You. A methodology for motif discovery employing iterated cluster re-assignment / Osman Abul, Finn Drabls and Geir Kjetil Sandve -- | ||
| 500 | |a - Biological pathways and systems. Identifying biological pathways via phase decomposition and profile extraction / Yi Zhang and Zhidong Deng. Expectation-maximization algorithms for fuzzy assignment of genes to cellular pathways / Liviu Popescu and Golan Yona. Classification of Drosophila embryonic developmental stage range based on gene expression pattern images / Jieping Ye ... [et al.]. Evolution versus "intelligent design": comparing the topology of protein-protein interaction networks to the internet / Qiaofeng Yang ... [et al.] -- | ||
| 500 | |a - Protein functions and computational proteomics. Cavity-aware motifs reduce false positives in protein function prediction / Brian Y. Chen ... [et al.]. Protein subcellular localization prediction based on compartment-specific biological features / Chia-Yu Su ... [et al.]. Predicting the binding affinity of MHC class II peptides / Fatih Altiparmak, Altuna Akalin and Hakan Ferhatosmanoglu. Codon-based detection of positive selection can be biased by heterogeneous distribution of polar amino acids along protein sequences / Xuhua Xia and Sudhir Kumar. Bayesian data integration: a functional perspective / Curtis Huttenhower and Olga G. Troyanskaya. An iterative algorithm to quantify the factors influencing peptide fragmentation for MS/MS spectrum / Chungong Yu ... [et al.]. Complexity and scoring function of MS/MS Peptide De Novo sequencing / Changjiang Xu and Bin Ma -- | ||
| 500 | |a - Biomedical applications. Expectation-maximization method for reconstructing tumor phylogenies from single-cell data / Gregory Pennington ... [et al.]. Simulating in vitro epithelial morphogenesis in multiple environments / Mark R. Grant, Sean H. J. Kim and C. Anthony Hunt. A combined data mining approach for infrequent events: analyzing HIV mutation changes based on treatment history / Ray S. Lin ... [et al.]. A systems biology case study of ovarian cancer drug resistance / Jake Y. Chen ... [et al.] | ||
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| dewey-full | 572.80285 |
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| dewey-ones | 572 - Biochemistry |
| dewey-raw | 572.80285 |
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| dewey-tens | 570 - Biology |
| discipline | Biologie |
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Codon-based detection of positive selection can be biased by heterogeneous distribution of polar amino acids along protein sequences / Xuhua Xia and Sudhir Kumar. Bayesian data integration: a functional perspective / Curtis Huttenhower and Olga G. Troyanskaya. An iterative algorithm to quantify the factors influencing peptide fragmentation for MS/MS spectrum / Chungong Yu ... [et al.]. Complexity and scoring function of MS/MS Peptide De Novo sequencing / Changjiang Xu and Bin Ma -- </subfield></datafield><datafield tag="500" ind1=" " ind2=" "><subfield code="a"> - Biomedical applications. Expectation-maximization method for reconstructing tumor phylogenies from single-cell data / Gregory Pennington ... [et al.]. Simulating in vitro epithelial morphogenesis in multiple environments / Mark R. Grant, Sean H. J. Kim and C. Anthony Hunt. A combined data mining approach for infrequent events: analyzing HIV mutation changes based on treatment history / Ray S. Lin ... [et al.]. A systems biology case study of ovarian cancer drug resistance / Jake Y. Chen ... 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| genre | (DE-588)1071861417 Konferenzschrift gnd-content |
| genre_facet | Konferenzschrift |
| id | DE-604.BV043126018 |
| illustrated | Not Illustrated |
| indexdate | 2024-07-10T07:18:14Z |
| institution | BVB |
| isbn | 186094700X 1860947573 9781860947001 9781860947575 |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-028550209 |
| oclc_num | 285164371 |
| open_access_boolean | |
| owner | DE-1046 DE-1047 |
| owner_facet | DE-1046 DE-1047 |
| physical | 1 Online-Ressource (xvi, 400 p.) |
| psigel | ZDB-4-EBA ZDB-4-EBA FAW_PDA_EBA |
| publishDate | 2006 |
| publishDateSearch | 2006 |
| publishDateSort | 2006 |
| publisher | Imperial College Press |
| record_format | marc |
| series2 | Series on advances in bioinformatics and computational biology |
| spelling | Computational Systems Bioinformatics Conference < 2006, Stanford, Calif.> Verfasser aut Computational systems bioinformatics CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 editors, Peter Markstein, Ying Xu Life Sciences Society computational systems bioinformatics CSB Conference proceedings 2006 CSB 2006 Conference proceedings London Imperial College Press c2006 1 Online-Ressource (xvi, 400 p.) txt rdacontent c rdamedia cr rdacarrier Series on advances in bioinformatics and computational biology v. 4 "Fifth Annual Computational Systems Bioinformatics Conference, CSB2006"--P. [v]. - Sponsored by Hewlett-Packard Company and Microsoft Research--p. [v]. - Previous CSB Conference (4th) held in Stanford, Calif. Aug. 8-11, 2005 (IEEE Computer Society Bioinformatics Conference) Includes bibliographical references and index Committees -- Referees -- Preface -- Keynote Addresses. Exploring the ocean's microbes: sequencing the seven seas / Marvin E. Frazier ... [et al.]. Don't know much about philosophy: the confusion over bio-ontologies / Mark A. Musen -- Invited talks. Biomedical Informatics Research Network (BIRN): building a national collaboratory for bioMedical and brain research / Mark H. Ellisman. Protein network comparative genomics / Trey Ideker. Systems biology in two dimensions: understanding and engineering membranes as dynamical systems / Erik Jakobsson. Bioinformatics at Microsoft Research / Simon Mercer. Movie crunching in biological dynamic imaging / Jean-Christophe Olivo-Marin. Engineering nucleic acid-based molecular sensors for probing and programming cellular systems / Christina D. Smolke. Reactome: a knowledgebase of biological pathways / Lincoln Stein ... [et al.] -- - Structural bioinformatics. Effective optimization algorithms for fragment-assembly based protein structure prediction / Kevin W. DeRonne and George Karypis. Transmembrane helix and topology prediction using hierarchical SVM classifiers and an alternating geometric scoring function / Allan Lo ... [et al.]. Protein fold recognition using the gradient boost algorithm / Feng Jiao ... [et al.]. A graph-based automated NMR backbone resonance sequential assignment / Xiang Wan and Guohui Lin. A data-driven, systematic search algorithm for structure determination of denatured or disordered proteins / Lincong Wang and Bruce Randall Donald. Multiple structure alignment by optimal RMSD implies that the average structure is a consensus / Xueyi Wang and Jack Snoeyink. Identification of ?-Helices from low resolution protein density maps / Alessandro Dal Palu ... [et al.]. Efficient annotation of non-coding RNA structures including pseudoknots via automated filters / Chunmei Liu ... [et al.]. - Thermodynamic matchers: strengthening the significance of RNA folding energies / Thomas Hochsmann, Matthias Hochsmann and Robert Giegerich -- Microarray data analysis and applications. PEM: a general statistical approach for identifying differentially expressed genes in time-course cDNA microarray experiment without replicate / Xu Han, Wing-Kin Sung and Lin Feng. Efficient generalized matrix approximations for biomarker discovery and visualization in gene expression data / Wenyuan Li ... [et al.] -- - Computational genomics and genetics. Efficient computation of minimum recombination with genotypes (not haplotypes) / Yufeng Wu and Dan Gusfield. Sorting genomes by translocations and deletions / Xingqin Qi ... [et al.]. Turning repeats to advantage: scaffolding genomic contigs using LTR retrotransposons / Ananth Kalyanaraman, Srinivas Aluru and Patrick S. Schnable. Whole genome composition distance for HIV-1 genotyping / Xiaomeng Wu ... [et al.]. Efficient recursive linking algorithm for computing the likelihood of an order of a large number of generic markers / S. Tewari, S. M. Bhandarkar and J. Arnold. Optimal Imperfect Phylogeny Reconstruction and Haplotyping (IPPH) / Srinath Sridhar ... [et al.]. Toward an algebraic understanding of haplotype inference by pure parsimony / Daniel G. Brown and Ian M. Harrower. Global correlation analysis between redundant probe sets using a large collection of Arabidopsis ATH1 expression profiling data / Xiangqin Cui and Ann Loraine -- - Motif sequence identification. Distance-based identification of structure motifs in proteins using constrained frequent subgraph mining / Jun Huan ... [et al.]. An improved Gibbs sampling method for motif discovery via sequence weighting / Xin Chen and Tao Jiang. Detection of cleavage sites for HIV-1 protease in native proteins / Liwen You. A methodology for motif discovery employing iterated cluster re-assignment / Osman Abul, Finn Drabls and Geir Kjetil Sandve -- - Biological pathways and systems. Identifying biological pathways via phase decomposition and profile extraction / Yi Zhang and Zhidong Deng. Expectation-maximization algorithms for fuzzy assignment of genes to cellular pathways / Liviu Popescu and Golan Yona. Classification of Drosophila embryonic developmental stage range based on gene expression pattern images / Jieping Ye ... [et al.]. Evolution versus "intelligent design": comparing the topology of protein-protein interaction networks to the internet / Qiaofeng Yang ... [et al.] -- - Protein functions and computational proteomics. Cavity-aware motifs reduce false positives in protein function prediction / Brian Y. Chen ... [et al.]. Protein subcellular localization prediction based on compartment-specific biological features / Chia-Yu Su ... [et al.]. Predicting the binding affinity of MHC class II peptides / Fatih Altiparmak, Altuna Akalin and Hakan Ferhatosmanoglu. Codon-based detection of positive selection can be biased by heterogeneous distribution of polar amino acids along protein sequences / Xuhua Xia and Sudhir Kumar. Bayesian data integration: a functional perspective / Curtis Huttenhower and Olga G. Troyanskaya. An iterative algorithm to quantify the factors influencing peptide fragmentation for MS/MS spectrum / Chungong Yu ... [et al.]. Complexity and scoring function of MS/MS Peptide De Novo sequencing / Changjiang Xu and Bin Ma -- - Biomedical applications. Expectation-maximization method for reconstructing tumor phylogenies from single-cell data / Gregory Pennington ... [et al.]. Simulating in vitro epithelial morphogenesis in multiple environments / Mark R. Grant, Sean H. J. Kim and C. Anthony Hunt. A combined data mining approach for infrequent events: analyzing HIV mutation changes based on treatment history / Ray S. Lin ... [et al.]. A systems biology case study of ovarian cancer drug resistance / Jake Y. Chen ... [et al.] Bioinformatics Computational biology Biological systems / Computer simulation Biological systems / Simulation methods COMPUTERS / Bioinformatics bisacsh Bioinformatics fast Biological systems / Computer simulation fast Biological systems / Simulation methods fast Computational biology fast Bioinformatics Congresses Computational biology Congresses Biological systems Computer simulation Congresses Biological systems Simulation methods Congresses (DE-588)1071861417 Konferenzschrift gnd-content Markstein, Peter Sonstige oth Xu, Ying Sonstige oth Hewlett-Packard Company Sonstige oth Microsoft Research Sonstige oth Life Sciences Society Sonstige oth http://search.ebscohost.com/login.aspx?direct=true&scope=site&db=nlebk&db=nlabk&AN=210863 Aggregator Volltext |
| spellingShingle | Computational systems bioinformatics CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 Bioinformatics Computational biology Biological systems / Computer simulation Biological systems / Simulation methods COMPUTERS / Bioinformatics bisacsh Bioinformatics fast Biological systems / Computer simulation fast Biological systems / Simulation methods fast Computational biology fast Bioinformatics Congresses Computational biology Congresses Biological systems Computer simulation Congresses Biological systems Simulation methods Congresses |
| subject_GND | (DE-588)1071861417 |
| title | Computational systems bioinformatics CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 |
| title_alt | Life Sciences Society computational systems bioinformatics CSB Conference proceedings 2006 CSB 2006 Conference proceedings |
| title_auth | Computational systems bioinformatics CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 |
| title_exact_search | Computational systems bioinformatics CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 |
| title_full | Computational systems bioinformatics CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 editors, Peter Markstein, Ying Xu |
| title_fullStr | Computational systems bioinformatics CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 editors, Peter Markstein, Ying Xu |
| title_full_unstemmed | Computational systems bioinformatics CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 editors, Peter Markstein, Ying Xu |
| title_short | Computational systems bioinformatics |
| title_sort | computational systems bioinformatics csb2006 conference proceedings stanford ca 14 18 august 2006 |
| title_sub | CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 |
| topic | Bioinformatics Computational biology Biological systems / Computer simulation Biological systems / Simulation methods COMPUTERS / Bioinformatics bisacsh Bioinformatics fast Biological systems / Computer simulation fast Biological systems / Simulation methods fast Computational biology fast Bioinformatics Congresses Computational biology Congresses Biological systems Computer simulation Congresses Biological systems Simulation methods Congresses |
| topic_facet | Bioinformatics Computational biology Biological systems / Computer simulation Biological systems / Simulation methods COMPUTERS / Bioinformatics Bioinformatics Congresses Computational biology Congresses Biological systems Computer simulation Congresses Biological systems Simulation methods Congresses Konferenzschrift |
| url | http://search.ebscohost.com/login.aspx?direct=true&scope=site&db=nlebk&db=nlabk&AN=210863 |
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