Deep sequencing data analysis:
Saved in:
| Format: | Book |
|---|---|
| Language: | English |
| Published: |
New York [u.a.]
Humana Press
2013
|
| Series: | Methods in molecular biology
1038 |
| Subjects: | |
| Online Access: | Inhaltsverzeichnis |
| Physical Description: | X, 234 S. Ill., graph. Darst. |
| ISBN: | 9781627035132 |
Staff View
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Record in the Search Index
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| adam_text | Contents
Preface
....................................................................
-ρ
Contributors
...............................................................
ίχ
1
An Introduction to High-Throughput Sequencing Experiments:
Design and Bioinformatics Analysis
...................................... 1
RAchelly
Normand
and Itai
Tanai
2
Compressing Resequencmg Data with GReEn
............................ 27
Armando J.
Pinho,
Diogo
Pratas,
and Sara P. Garcia
3
On the Accuracy of Short Read Mapping
................................. 39
Peter
Menzel,
Jes
FrelLsen, Mireya
Plass,
Simon H.
Rasmussen,
and Anders
Kroßh
4
Statistical Modeling of Coverage in High-Throughput Data
................ 61
David Golan and Saharon
Rosset
5
Assembly Algorithms for Deep Sequencing Data: Basics and Pitfalls
......... 81
Nitzan
Kol
and Noam Shomron
6
Short Read Mapping for
Exorne
Sequencing
.............................. 93
Xueya Zhou,
Suying Bao,
Binbin
Wang, Xuegong Zhang,
and
Ύοη
-Qiang
Sonß
7
Profiling
Short Tandem
Repeats from
Short
Reads
........................ 113
Melissa
Gymrek and Yaniv
Erlich
8
Exorne
Sequencing Analysis: A Guide to Disease Variant Detection
.......... 137
Ofer Isakov,
Marie
Perrone,
and Noam Shomron
9
Identifying
RNA
Editing Sites in miRNAs by Deep Sequencing
............. 159
Shahar Alon and Eli Eisenberg
10
Identifying Differential Alternative Splicing Events from
RNA
Sequencing Data Using RNASeq-MATS
................................. 171
Juw Won Park, Collin Tokbeim, Sbibao Shen, and T» Xing
11
Optimizing Detection of Transcription Factor-Binding Sites
in ChlP-seq Expenments
............................................... 181
Aleksi Kallio and Laura
L
Elo
12
Statistical Analysis of ChlP-seq Data with MOSAiCS
...................... 193
Guannan Sun, Dongjun Chung,
Кип
Liang, and
Sündüz Kelés
13
Detection of Reverse Transcriptase Termination Sites Using cDNA
Ligation and Massive Parallel Sequencing
................................ 213
Lukasz
J. Kielpinski,
Mette
Boyd,
Albin Sandelin,
and
Jeppe Vinther
Index
.................................................................... 233
VII
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| title | Deep sequencing data analysis |
| title_auth | Deep sequencing data analysis |
| title_exact_search | Deep sequencing data analysis |
| title_full | Deep sequencing data analysis ed. by Noam Shomron |
| title_fullStr | Deep sequencing data analysis ed. by Noam Shomron |
| title_full_unstemmed | Deep sequencing data analysis ed. by Noam Shomron |
| title_short | Deep sequencing data analysis |
| title_sort | deep sequencing data analysis |
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