Extremophiles: sustainable resources and biotechnological implications
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| Format: | Book |
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| Language: | English |
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Hoboken, NJ
Wiley-Blackwell
2013
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| Subjects: | |
| Online Access: | Inhaltsverzeichnis |
| Item Description: | Includes index. |
| Physical Description: | XXIII, 429 S. Ill. |
| ISBN: | 9781118103005 |
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| 245 | 1 | 0 | |a Extremophiles |b sustainable resources and biotechnological implications |c ed. by Om V. Singh |
| 264 | 1 | |a Hoboken, NJ |b Wiley-Blackwell |c 2013 | |
| 300 | |a XXIII, 429 S. |b Ill. | ||
| 336 | |b txt |2 rdacontent | ||
| 337 | |b n |2 rdamedia | ||
| 338 | |b nc |2 rdacarrier | ||
| 500 | |a Includes index. | ||
| 650 | 4 | |a Extreme environments |x Microbiology | |
| 650 | 4 | |a Microbial biotechnology | |
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Record in the Search Index
| _version_ | 1804149745821679616 |
|---|---|
| adam_text | CONTENTS
Contributors
xv
Introduction
xix
1
MOLECULAR
EVOLUTION
OF
EXTREMOPHILES
1
Debamitra Chakravorty, Ashwinee
Kumar
Shreshtha,
V.
R. Sarath
Babu,
and Sanjukta
Patra
l
. 1
Introduction
1
1.2
Molecular
Evolution
of Thermophiles
2
1.2.1
Habitat
2
1.2.2
Cellular Organization
З
1.2.3
Genome
3
1.2.4
Proteome
З
1.3
Molecular Evolution of Psychrophiles
4
1.3.1
Habitat
4
1.3.2
Cellular Organization
4
1.3.3
Genome
5
1.3.4
Proteome
5
1.4
Molecular Evolution of Halophiles
6
1.4.1
Habitat
6
1.4.2
Cellular Organization
6
1.4.3
Genome
6
1.4.4
Proteome
6
1.5
Molecular Evolution of Alkaliphiles
7
1.5.1
Habitat
7
1.5.2
Cellular Organization
7
1.5.3
Genome
7
1.5.4
Proteome
8
1.6
Molecular Evolution of Acidophiles
8
1.6.1
Habitat
8
1.6.2
Cellular Organization
8
1.6.3
Genome
9
1.6.4
Proteome
10
1.7
Molecular Evolution of Barophiles
10
1.7.1
Habitat
10
1.7.2
Cellular Organization
10
vii
Viii CONTENTS
1.7.3 Genome 11
1.7.4 Proteome 11
1.8 Engineering Extremophiles 12
1.8.1
Microbiology
12
1.8.2
Molecular Biology
13
1.8.3 Bioinformatics 16
1.9
Casestudies
17
1.9.1
Biofuel
Production
17
1.9.2
Bioremediation
18
1.9.3
Pesticide
Biodegradation 18
1.9.4
Escherichia
coli: A
Candidate Extremophile
19
1.9.5
Oil-Spill-Cleaning Bacteria
19
1.9.6
Potential
Applications
and Benefits
19
1.10
Implications
of Engineered
Extremophiles on
Ecology,
Environment,
and Health
20
1.11
Conclusions
and Recommendations
20
References
21
ATTAINING
EXTREMOPHILES
AND EXTREMOLYTES:
METHODOLOGIES AND LIMITATIONS
29
Debamitra Chakravorty and Sanjukta
Patra
2.1
Introduction
29
2.2
Extremophiles: Types and Diversity
30
2.2.1
Thermophiles
30
2.2.2
Psychrophiles
37
2.2.3
Halophiles
41
2.2.4
Alkaliphiles
46
2.2.5
Acidophiles
49
2.2.6
Barophiles
52
2.3
Extremolytes
54
2.3.1
Production and Purification of
Extremolytes
56
2.3.2
Detection, Identification, and Quantification of
Extremolytes
63
2.3.3
Limitations
63
2.4
Conclusions
64
References
64
STRATEGIES FOR THE ISOLATION AND CULTIVATION OF
HALOPHILIC MICROORGANISMS
75
Aharon
Oren
3.1
Introduction
75
3.2
Thalassohaline and Athalassohaline Hypersaline Environments
76
3.3
Case Studies
79
3.3.1
Isolation of Aerobic Chemoheterotrophic Archaea from
Solar Salterns
79
CONTENTS
IX
3.3.2
Magnesium-Requiring and Magnesium-Tolerant Archaea
from the Dead
Sea
81
3.3.3
Isolation of Acidophilic Halophilic Archaea
82
3.3.4
Isolation of Unusual Anaerobic Halophiles from
Deep-Sea Brines
82
3.3.5
Isolation of Polyextremophilic Anaerobic Halophiles
83
3.3.6
Isolation of Halophilic Microorganisms Associated with
Plants and Animals
84
3.3.7
Isolation of Halophilic Archaea from Low-Salt Environments
84
3.4
The Upper Salinity Limits of Different Types of Energy Generation
85
3.5
Final Comments
88
References
89
HALOPHILIC PROPERTIES AND THEIR MANIPULATION
AND APPLICATION
95
Tsutomu Arakawa, Hiroko Tokunaga, Matsujiro Ishibashi,
and Masao Tokunaga
4.1
Introduction
95
4.2
Industrial Applications of Halophilic Organisms and Their Proteins
96
4.3
Extreme and Moderate Halophiles and Their Proteins
98
4.4
Generation of Low-Salt Stable Extreme-Halophilic Proteins
99
4.5
Interconversion
of Halophilic and Nonhalophilic Proteins
105
4.5.1
Dimer-Tetramer Conversion of HaNDK and PaNDK
106
4.5.2
Generation of Halophilic PaNDK
108
4.6
Soluble Expression of
Recombinant
Proteins
110
4.7
Natively Unfolded Proteins
113
4.8
Organic Solvent Tolerance
113
References
114
FEATURES AND APPLICATIONS OF HALOPHILIC ARCHAEA
123
Ximena C. Abrevaya
5.1
Introduction
123
5.2
General Features
124
5.2.1
Morphology
124
5.2.2
Metabolism
125
5.2.3
Osmoadaptation
126
5.2.4
Natural Habitats
126
5.2.5
Pigments
128
5.2.6
Genetics
130
5.3
Applications of Halophilic Archaea
130
5.3.1
Production of Enzymes
131
5.3.2
Production of
Biopolymers
135
5.3.3
Uses in Fermented Foods
137
5.3.4
Uses in Bioremediation and Xenobiotic Degradation
138
CONTENTS
5.3.5
Uses in
Solar Salt
Production
139
5.3.6 Carotenoid Derivative
Production and Biotechnological Uses
140
5.3.7
Other
Applications 141
5.3.8 Applications in Astrobiology-Related Research 142
5.4
Concluding Remarks
143
Acknowledgment
144
References
144
BIOTECHNOLOGICAL APPLICATIONS OF
COLD-ADAPTED BACTERIA
159
Laura Garcia-Descalzo, Alberto Alcazar, Fernando Baquero,
and
Cristina
Cid
6.1
Introduction
159
6.2
Molecular Mechanisms of Adaptation to Cold Environments
162
6.3
Exopolysaccharides
163
6.4
Lipids
164
6.5
Proteins
164
6.5.1
Stable Proteins at Cold Temperatures
164
6.5.2
Cold-Adapted Enzymes
167
6.6
Biotechnological Applications of Cold-Adapted Enzymes
168
6.6.1
Detergents
168
6.6.2
Food Industry
168
6.6.3
Pharmaceutical Industry
168
6.6.4
Biofuels
169
6.6.5
Molecular Biology
169
6.7
Biodegradation
and Bioremediation in Cold Environments
169
6.7.1 Biodegradation
of Petroleum
169
6.7.2 Biodegradation
of Phenolic Compounds
170
6.7.3
Bioremediation of Radionuclides, Halogenated Organics,
and Nitramines
171
6.7.4
Treatment of Acid Mine Drainage
172
6.8
Conclusions
172
Acknowledgments
172
References
173
Webliography
174
ECOLOGY AND BIOTECHNOLOGY OF EXTREMOPHILIC
MICROORGANISMS, PARTICULARLY ANAEROBIC
THERMOPHILES
175
Francesco Canganella
7.1
Introduction
175
7.2
Thermophiles
176
7.2.1
Thermophilic Anaerobes and Clostridia
178
CONTENTS
ХІ
7.2.2
Ecology of Thermophiles
179
7.2.3
Ecology of Extreme Thermophilic Archaea
181
7.2.4
Ecology of Extreme Thermophilic Bacteria
182
7.2.5
Biotechnology of Thermophiles
182
7.3
Acidophiles
187
7.3.1
Acidophilic Ecosystems
191
7.4
Alkaliphiles
191
7.4.1
Alakalyphilic Ecosystems
192
7.4.2
Biotechnology of Acidophilic and
Alkaliphilic Microorganisms
192
7.5
Halophiles
193
7.5.1
NaCl-Enriched Ecosystems
193
7.5.2
Biotechnology of Halophilic Microorganisms
194
7.6
Piezophiles
194
7.6.1
Ecology of Piezophiles
196
7.6.2
Biotechnology of Piezophiles
196
References
196
8
THE ROLE OF EXTREMOPHILIC MICROORGANISMS
AND THEIR BIOPRODUCTS IN FOOD PROCESSING
AND PRODUCTION
205
Jane A.
Irwin
8.1
Introduction
205
8.2
Enzymes from Extremophiles in Food Processing
206
8.2.1
Enzymes from Thermophiles
208
8.2.2
Enzymes from Cold-Adapted Organisms
212
8.2.3
Molecules from Halophiles
215
8.3
Alkaliphiles, Acidophiles, and Piezophiles
217
8.4
Extremophiles in Food Spoilage and Contamination
218
8.4.1
Meat and Fish
218
8.4.2
Milk and Dairy Products
219
8.4.3
Canned and Dried Food
220
8.5
Extremophiles as Pathogens of Food Species
221
8.6
Conclusions
222
References
222
9
EXTREMOPHILES AND THEIR APPLICATION TO
BIOFUEL RESEARCH
233
M.P. Taylor, R. Bauer, S. Mackay, M. Tuffin, and DA. Cowan
9.1
Introduction
233
9.2
Extremophiles and Fuels
235
9.2.1
Thermophiles and Liquid Fuels:
Butanol
and
Ethanol
235
9.2.2
Thermophiles and Gaseous Fuels: Methane and Hydrogen
239
x¡¡
CONTENTS
9.2.3
Psychrophiles and Acidophile Whole-Cell Biocatalysts
for Fuels
240
9.3
Exploiting Extremophilic Enzymes in Biomass Conversion
to Biofuel
241
9.3.1
Lignocellulose: A Recalcitrant but Valuable
Biomass Resource
241
9.3.2
Other Polymeric Biomass Resources
246
9.3.3
Enhancing Enzyme Efficiency
248
9.4
Conclusions and Future Prospects
249
References
249
10
SUSTAINABLE ROLE OF THERMOPHILES IN THE SECOND
GENERATION OF
ETHANOL
PRODUCTION
267
Anuj
К. С
handel,
Ellen
С.
Giese,
От
V. Singh, and Silvio
Silvério
da Silva
10.1
Introduction
267
10.2
Thermophilic Cellulases for Deconstraction of the Plant Cell Wall
269
10.2.1
Thermophilic Cellulase Production and Characteristics
270
10.2.2
Alterations in Thermophiles for High-Cellulase Titers
273
10.2.3 ß-Glucosidases
from Thermophilic Microorganisms
274
10.3
Ethanol
Production at Elevated Temperatures
274
10.3.1
Thermotolerant Microorganisms for
Ethanol
Production
276
10.3.2
Improvements in Thermophilic
Ethanol
Producers
277
10.3.3
Process Development and Thermophiles
279
10.4
Future Perspectives and Challenges
281
10.5
Conclusions
283
Acknowledgments
283
References
283
11
ECOFRIENDLY ASPECTS OF THE USE OF EXTREMOPHILIC
ENZYMES IN TEXTILE SUBSTRATES
291
Bipin J. Agrawal and Sandhya Mishra
11.1
Introduction
291
11.2
Biopolymeric Fibers
292
11.3
Extremophilic Enzymes and Their Use in the Textile Industry
293
1.3.1
Amylases
294
1.3.2
Cellulases
295
1.3.3
Pectinases
295
1.3.4
Catalases
296
1.3.5
Proteases
296
1.3.6
Esterases
296
11.3.7
Laceases
297
11.4
Utilization of Extremophilic Enzymes in Textile Wet Processing
297
11.4.1
Fiber Preparation
297
11.4.2
Fabric Preparation
300
11.4.3
Enzymes in Biopreparation of Textiles
303
CONTENTS XIII
11.5
Finishing with Extremophilic Enzymes
306
11.5.1
Biopolishing of Cotton
306
11.5.2
Bio-Denim Washing
307
11.5.3
Biopolishing of Jute
309
11.5.4
Biopolishing of Wool
310
11.5.5
Biopolishing of Silk
310
11.5.6
Biopolishing of Lyocell
310
11.6
Role of Enzymes in Textile After-Care
311
11.7
Role of Enzymes in Effluent Treatment of Textiles
314
11.8
Conclusions
315
References
315
12
THE USE OF EXTREMOPHILIC MICROORGANISMS IN THE
INDUSTRIAL RECOVERY OF METALS
319
Carlos A. Jerez
1
2.
1 Introduction
319
12.2
Biomining Extremophiles and Their Industrial Applications
320
12.3
Molecular Studies in Acidophilic Biomining Microorganisms
322
12.4
Microbial Resistance to Acid and Metals
324
12.4.1
Acidophilic Bacteria
324
12.4.2
Acidophilic Archaeons
328
Acknowledgments
331
References
331
13
BACTERIAL POLYMERS PRODUCED BY EXTREMOPHILES:
BIOSYNTHESIS, CHARACTERIZATION, AND APPLICATIONS
OF EXOPOLYSACCHARIDES
335
Nicolaus
Barbara, Anzelmo Gianluca, and
Poli
Annarita
13.1
Introduction
335
13.2
EPS Produced by Extremophilic Bacteria
336
13.3
Examples of Proposed EPS Biosynthesis from Extremophiles
345
13.4
Physicochemical Investigations for Potential Applications
349
Acknowledgment
351
References
351
14
BIOMEDICAL
APPLICATIONS OF EXOPOLYSACCHARIDES
PRODUCED BY MICROORGANISMS ISOLATED FROM
EXTREME ENVIRONMENTS
357
Ignacio
J.
Molina, Carmen Ruiz-Ruiz, Emilia Quesada, and Victoria
Béjar
14.1
Introduction
357
14.2
Chemical Composition and Structure of EPSs
358
14.3
Physical Properties of EPSs
358
14.4
Biological Functions of EPSs
359
14.5
Exopolysaccharides Deriving from Extremophilic Organisms
359
Xiv CONTENTS
14.6
Clinical Applications of EPSs
359
14.7
Exopolysaccharides of Halophilic Microorganisms
361
14.7.1
Halomonas stenophila B-100
361
14.8
Concluding Remarks
362
Acknowledgments
362
References
362
15
BIOSYNTHESIS OF
EXTREMOLYTES:
RADIATION
RESISTANCE AND BIOTECHNOLOGICAL IMPLICATIONS
367
Erin Copeland, Nicholas Choy, Prashant Gabani, and
Om V.
Singh
15.1
Introduction
367
15.2
Biotechnological Implications of
Extremolytes
369
15.2.1
Industrial Implications
369
15.2.2
Therapeutic Implications
370
15.3
Fermentative Production of
Extremolytes
371
15.3.1
Microorganisms: An Asset in
Extremolyte
Fermentation
371
15.3.2
Evaluation of the Fermentation Process
375
15.4
Commercialization of
Extremolytes
and Extremozymes
380
15.5
Product Recovery
382
15.6
Conclusions
383
References
383
16
SMART THERAPEUTICS FROM EXTREMOPHILES:
UNEXPLORED APPLICATIONS AND
TECHNOLOGICAL CHALLENGES
389
Raj Kumar andAjeet Singh
16.1
Introduction
389
16.2
Extremolytes
as Protein Protectants
391
16.3
Extremolytes
as Cell Protectants
391
16.3.1
Mycosporine-like
Amino
Acids
392
16.3.2
Bacterioraberin
393
16.3.3
Sphaerophorin and Pannarin
393
16.4
Novel Therapeutics in the Developmental Stage
393
16.5
Homeland Security and Military Medicine
394
16.6
Technological Gaps in Therapeutic Product Development
Using Extremophiles
396
16.7
Conclusions
397
Acknowledgment
398
References
398
Index
403
|
| any_adam_object | 1 |
| author_GND | (DE-588)1072111802 |
| building | Verbundindex |
| bvnumber | BV040633756 |
| callnumber-first | Q - Science |
| callnumber-label | QR100 |
| callnumber-raw | QR100.9 |
| callnumber-search | QR100.9 |
| callnumber-sort | QR 3100.9 |
| callnumber-subject | QR - Microbiology |
| classification_rvk | WF 5850 |
| classification_tum | CIT 925f BIO 299f |
| ctrlnum | (OCoLC)824312148 (DE-599)BVBBV040633756 |
| dewey-full | 578.75/8 |
| dewey-hundreds | 500 - Natural sciences and mathematics |
| dewey-ones | 578 - Natural history of organisms |
| dewey-raw | 578.75/8 |
| dewey-search | 578.75/8 |
| dewey-sort | 3578.75 18 |
| dewey-tens | 570 - Biology |
| discipline | Biologie Chemie-Ingenieurwesen Biotechnologie |
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| genre | (DE-588)4143413-4 Aufsatzsammlung gnd-content |
| genre_facet | Aufsatzsammlung |
| id | DE-604.BV040633756 |
| illustrated | Illustrated |
| indexdate | 2024-07-10T00:27:55Z |
| institution | BVB |
| isbn | 9781118103005 |
| language | English |
| lccn | 2012011093 |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-025460966 |
| oclc_num | 824312148 |
| open_access_boolean | |
| owner | DE-355 DE-BY-UBR DE-11 DE-M49 DE-BY-TUM |
| owner_facet | DE-355 DE-BY-UBR DE-11 DE-M49 DE-BY-TUM |
| physical | XXIII, 429 S. Ill. |
| publishDate | 2013 |
| publishDateSearch | 2013 |
| publishDateSort | 2013 |
| publisher | Wiley-Blackwell |
| record_format | marc |
| spelling | Extremophiles sustainable resources and biotechnological implications ed. by Om V. Singh Hoboken, NJ Wiley-Blackwell 2013 XXIII, 429 S. Ill. txt rdacontent n rdamedia nc rdacarrier Includes index. Extreme environments Microbiology Microbial biotechnology Extremophiler Mikroorganismus (DE-588)4332438-1 gnd rswk-swf Biotechnologie (DE-588)4069491-4 gnd rswk-swf (DE-588)4143413-4 Aufsatzsammlung gnd-content Extremophiler Mikroorganismus (DE-588)4332438-1 s DE-604 Biotechnologie (DE-588)4069491-4 s b DE-604 Singh, Om V. Sonstige (DE-588)1072111802 oth Digitalisierung UB Regensburg application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=025460966&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Extremophiles sustainable resources and biotechnological implications Extreme environments Microbiology Microbial biotechnology Extremophiler Mikroorganismus (DE-588)4332438-1 gnd Biotechnologie (DE-588)4069491-4 gnd |
| subject_GND | (DE-588)4332438-1 (DE-588)4069491-4 (DE-588)4143413-4 |
| title | Extremophiles sustainable resources and biotechnological implications |
| title_auth | Extremophiles sustainable resources and biotechnological implications |
| title_exact_search | Extremophiles sustainable resources and biotechnological implications |
| title_full | Extremophiles sustainable resources and biotechnological implications ed. by Om V. Singh |
| title_fullStr | Extremophiles sustainable resources and biotechnological implications ed. by Om V. Singh |
| title_full_unstemmed | Extremophiles sustainable resources and biotechnological implications ed. by Om V. Singh |
| title_short | Extremophiles |
| title_sort | extremophiles sustainable resources and biotechnological implications |
| title_sub | sustainable resources and biotechnological implications |
| topic | Extreme environments Microbiology Microbial biotechnology Extremophiler Mikroorganismus (DE-588)4332438-1 gnd Biotechnologie (DE-588)4069491-4 gnd |
| topic_facet | Extreme environments Microbiology Microbial biotechnology Extremophiler Mikroorganismus Biotechnologie Aufsatzsammlung |
| url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=025460966&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
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