The sugar code: fundamentals of glycosciences
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| Format: | Book |
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| Language: | English |
| Published: |
Weinheim
Wiley-VCH
2009
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| Subjects: | |
| Online Access: | Inhaltstext Inhaltsverzeichnis |
| Physical Description: | XXVIII, 569 S. Ill., graph. Darst. 25 cm |
| ISBN: | 9783527320899 352732089X |
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Record in the Search Index
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|---|---|
| adam_text |
IX CONTENTS FOREWORDS V PREFACE XXI LIST OF CONTRIBUTORS XXIII PART ONE
CHEMICAL BASIS 1 THE BIOCHEMICAL BASIS AND CODING CAPACITY OF THE SUGAR
CODE 3 HAROLD RUEDIGER AND HANS-JOACHIM CABIUS 1.1 ETYMOLOGICAL ROOTS 3
1.2 WHAT PROJECTION FORMULAS TELL US 4 1.3 THE CODING CAPACITY OF THE
SUGAR CODE 8 1.4 CONCLUSIONS 12 REFERENCES 13 1 THREE-DIMENSIONAL
ASPECTS OF THE SUGAR CODE 75 TIBOR KOIOR, SABINE ANDRE, JOZEF ULIINY,
AND HANS-JOACHIM CABIUS 2.1 HOW TO OBTAIN INFORMATION ABOUT CARBOHYDRATE
CONFORMATION 15 2.2 COMPLEXITY OF CARBOHYDRATE FLEXIBILITY 16 2.3 HOW TO
DESCRIBE THE SHAPE OF MONOSACCHARIDES 17 2.4 HOW TO DESCRIBE THE SHAPE
OF DI- AND OLIGOSACCHARIDES 18 2.5 ADDITIONAL FACTORS INFLUENCING THE
SHAPE OF OLIGO- AND POLYSACCHARIDES 22 2.6 EXAMPLES OF DI- AND
OLIGOSACCHARIDE CONFORMATIONS 23 2.7 CARBOHYDRATE-PROTEIN INTERMOLECULAR
INTERACTIONS AND REACTION MECHANISMS 26 2.8 HOW TO PERFORM MOLECULAR
MODELING OF LARGE GLYCANS 28 2. BIBLIOGRAFISCHE INFORMATIONEN
HTTP://D-NB.INFO/988249138 DIGITALISIERT DURCH X CONTENTS 3 THE
CHEMIST'S WAY TO SYNTHESIZE GLYCOSIDES 31 STEFAN OSCARSON 3.1 SYNTHESIS
OF OLIGOSACCHARIDES: STRATEGIES 32 3.2 GLYCOSIDIC BOND FORMATION 33 3.3
FISCHER GLYCOSYLATIONS 35 3.4 GLYCOSYL DONORS 36 3.5 ANOMERIC
CONFIGURATION: STEREOSELECTIVITY 38 3.5.1 FORMATION OF
1,2-TRANS-LINKAGES 39 3.5.2 FORMATION OF 1,2- CIS- LINKAGES 40 3.6
NEURAMINIC ACID AND KDO-GLYCOSIDE SYNTHESIS 42 3.7 FORMATION OF BUILDING
BLOCKS: ORTHOGONAL GLYCOSYLATIONS 44 3.8 PROTECTING GROUP MANIPULATIONS
46 3.9 AN EXAMPLE 46 3.10 CONCLUSIONS 49 REFERENCES 51 4 THE CHEMIST'S
WAY TO PREPARE MULTIVALENCY 53 YOANN M. CHABRE AND RENE ROY 4.1 BLOCKING
VIRAL/BACTERIAL ADHESION 54 4.2 HOW TO PREPARE MULTIVALENT
CARBOHYDRATES? 56 4.3 NEOGLYCOPROTEINS 57 4.4 NEOGLYCOLIPIDS AND
LIPOSOMES 58 4.5 GLYCOPOLYMERS 60 4.6 GLYCODENDRIMERS 62 CONTENTS | XI
6.2 INITIAL STEPS IN ASPARAGINE-LINKED GLYCOSYLATION 89 6.3 TRIMMING
REACTIONS BY A-GLUCOSIDASES AND INTERACTIONS WITH ER LECTINS 92 6.4
QUALITY CONTROL OF PROTEIN FOLDING AND ASSEMBLY: MACHINERY AND PRINCIPAL
MECHANISM 95 6.5 ER EXIT-FACING A CRUCIAL DECISION AND WHAT MANNOSE HAS
TO DO 96 6.6 HOW TO BECOME A MATURE N-GLYCAN? 99 6.6.1 GOLGI MANNOSE
TRIMMING AS THE START FOR N-GLYCAN ELONGATION 200 6.6.2 NUCLEOTIDE SUGAR
TRANSPORTERS IMPORT THE FUEL FOR OLIGOSACCHARIDE ELONGATION 100 6.6.3
GLYCOSYLTRANSFERASES: THE ORDERLY MATURATION REACTIONS 102 6.7 STRUCTURE
BUILDING BY N-ACETYLGLUCOSAMINYLTRANSFERASE-I AND
FUCOSYLTRANSFERASE-VIII 103 6.8 BRANCHING AND ELONGATION REACTIONS 103
6.8.1 MANNOSYL SS-N-ACETYLGLUCOSAMINYLTRANSFERASES 103 6.8.2
N-ACETYLGLUCOSAMINYL-SS-GALACTOSYLTRANSFERASES 104 6.8.3 CAPPING SUGARS
PROVIDE FUNCTIONS 104 6.8.4 SIALYLTRANSFERASES 105 6.8.5
FUCOSYLTRANSFERASES 306 6.8.6 GLUCURONYLTRANSFERASES 106 6.8.7
SULFOTRANSFERASES 207 6.9 DIVERSITY OF N-GLYCANS: STRUCTURAL AND
FUNCTIONAL IMPLICATIONS 207 6.10 CONCLUSIONS 109 XIII CONTENTS 7.4.3.2
RECOGNITION PHENOMENA 232 7.4.4 O-FUC AND O-GLC 132 7.4.4.1 PROTEIN
STRUCTURE AND STABILITY 134 7.4.4.2 RECOGNITION PHENOMENA 134 7.5
MUCINS: A MAJOR GROUP OF O-GLYCOSYLATED PROTEINS 134 7.6 CONCLUSIONS 136
REFERENCES 237 S GLYCOSYLATION OF MODEL AND'LOWER'ORGANISMS 739 LAIN B.
H. WILSON, KATHARINA PASCH'MGER, AND DUBRAVKO RENDIT 8.1 BACTERIAL
GLYCOSYLATION 239 8.2 YEAST GLYCOSYLATION 242 8.3 PLANT GLYCOSYLATION
343 8.4 INSECT GLYCOSYLATION 146 8.5 WORM GLYCOSYLATION 348 8.6
PROTOZOAN GLYCOSYLATION 150 8.7 FISH GLYCOSYLATION 151 8.8 CONCLUSIONS
352 REFERENCES 253 9 GLYCOSYLPHOSPHATIDYLINOSITOL ANCHORS: STRUCTURE,
BIOSYNTHESIS AND FUNCTIONS 755 HOSAM SHAMS-ELDIN, FRANCOISE
DEBIERRE-CROCKIEGO, AND RALPH T. SCHWARZ 9.1 STRUCTURE OF GPI ANCHORS
155 9.1.1 DETECTION AND ISOLATION OF GPI-ANCHORED PROTEINS 158 9.1.2
BIOSYNTHESIS OF GPI ANCHORS 360 9.2 REMODELING OF LIPID MOIETIES OF GPI
PROTEINS 366 9.3 CHEMICAL SYNTHESIS OF GPIS 167 9.3.1 MUTANT CELLS LEAD
THE WAY TO IDENTIFICATION OF COMPLEMENTATION CLASSE CONTENTS XIII 10.6
COMPLEX NEUTRAL GSLS 183 10.7 COMPLEX ACIDIC (ANIONIC) GSLS 385 10.8
SURVEY OF GSL FUNCTIONS 187 10.9 GSL MICRODOMAINS 388 10.10 GSLS AS
ATTACHMENT SITES FOR VIRUSES, BACTERIA AND TOXINS 192 10.11 GSLS AS
DEVELOPMENTAL OR DIFFERENTIATION MARKERS 193 10.12 TUMOR-ASSOCIATED GSL
ANTIGENS 293 10.13 GANGLIOSIDES IN NEURAL TISSUE 395 10.14 GSL
DEGRADATION AND GSL STORAGE DISORDERS 195 10.15 CONCLUSIONS 396
REFERENCES 197 11 PROTEOGLYCANS 799 ECKHART BUDDECKE 11.1
GLYCOSAMINOGLYCANS: COMPONENTS OF PROTEOGLYCANS (PGS) 399 11.1.1
STRUCTURE 199 11.1.2 BIOSYNTHESIS 203 11.1.3 CATABOLISM 202 11.2 PGS 204
11.3 LARGE AGGREGATING (HYALURONAN-BINDING) PGS 204 11.3.1 AGGRECAN 205
11.3.2 VERSICAN 206 11.3.3 NEUROCAN, BREVICAN 207 11.4 SMALL
LEUCINE-RICH PGS 207 11.5 BASEMENT MEMBRANE PGS 209 11.6 CELL-SURFACE
(TRANSMEMBRANE) PGS 211 11.6. XIV I CONTENTS PART FOUR
PROTEIN-CARBOHYDRATE INTERACTIONS 13 PROTEIN-CARBOHYDRATE INTERACTIONS:
BASIC CONCEPTS AND METHODS FOR ANALYSIS 233 DOLORES SOILS, ANTONIO
ROMERO, MARGARITA MENENDEZ, AND JESUS JIMENEZ-BARBERO 13.1 ATOMIC
FEATURES OF PROTEIN*SUGAR INTERACTIONS 233 13.2 ROLE OF WATER IN
PROTEIN-SUGAR INTERACTIONS 237 13.3 SELECTION OF CARBOHYDRATE CONFORMERS
BY PROTEINS 238 13.4 THERMODYNAMICS OF PROTEIN-CARBOHYDRATE INTERACTIONS
241 13.5 CONCLUSIONS 244 REFERENCES 245 14 HOW TO DETERMINE SPECIFICITY:
FROM LECTIN PROFILING TO GLYCAN MAPPING AND ARRAYS 247 HIROAKI TATENO,
ATSUSHI KUNO, ANDJUN HIRABAYASHI 14.1 QUANTITATIVE ASPECTS OF LECTIN
AFFINITY 248 14.2 FRONTAL AFFINITY CHROMATOGRAPHY (FAC) FOR
SUGAR-PROTEIN INTERACTIONS 250 14.3 AUTOMATED FAC-FD SYSTEM 252 14.4
FROM 'LECTIN PROFILING' TO 'GLYCAN MAPPING' 254 14.5 LECTIN MICROARRAY
ENABLES MULTIPLEXED LECTIN-GLYCAN INTERACTION ANALYSIS 254 14.6 PRACTICE
IN DIFFERENTIAL GLYCAN PROFILING: APPROACHES AND APPLICATIONS 257 14.7
CONCLUSIONS 258 CONTENTS XV 17 BACTERIAL AND VIRAL LECTINS 279 JAN
HOLGERSSON, ANKI CUSTAFSSON, AND STEFAN CAUNITZ 17.1 BACTERIAL LECTINS
279 17.1.1 FIMBRIAE/PILI 282 17.1.1.1 TYPE 1 FIMBRIAE 283 17.1.1.2 TYPE
P FIMBRIAE 283 17.1.1.3 TYPE S FIMBRIAE 284 17.1.1.4 TYPELVPILI 284
17.1.2 BACTERIAL SURFACE LECTINS 284 17.1.2.1 BABAANDSABA 285 17.1.2.2
LECAANDLECB 285 17.1.3 TOXINS 285 17.1.3.1 TOXIN A OF CLOSTRIDIUM
DIFFICILE 285 17.1.3.2 CHOLERA TOXIN 286 17.1.3.3 HEAT-LABILE AND
HEAT-STABLE TOXINS 286 17.1.3.4 SHIGA AND SHIGA-LIKE TOXINS 286 17.2
VIRUS BINDING 287 17.2.1 INFLUENZA VIRUS 290 17.2.1.1 INFLUENZA VIRUS
SURFACE PROTEINS 290 17.2.1.2 EPIDEMIOLOGY 290 17.2.1.3 INFLUENZA VIRUS
SPECIES AND TISSUE TROPISM 291 17.2.2 ROTAVIRUS 291 17.2.3 HUMAN
IMMUNODEFICIENCY VIRUS 1 292 17.2. XVII CONTENTS 19 ANIMAL AND HUMAN
LECTINS 377 HANS-JOACHIM CABIUS 19.1 PROTEIN FOLDS WITH LECTIN ACTIVITY
318 19.2 FUNCTIONS OF ANIMAL AND HUMAN LECTINS 320 19.3 LECTIN LIGANDS
AND AFFINITY REGULATION 326 19.4 CONCLUSIONS 327 REFERENCES 328 20
ROUTES IN LECTIN EVOLUTION: CASE STUDY ON THE C-TYPE LECTIN-LIKE DOMAINS
329 JILL E. CREADY AND ALEX N. ZELENSKY 20.1 C-TYPE LECTIN (CTL)
EVOLUTION AS A CASE STUDY 329 20.2 CTL SUPERFAMILY: STRUCTURES AND
GROUPS 330 20.3 MECHANISM OF CARBOHYDRATE BINDING 335 20.4 CTLS IN THE
GENOME ERA 337 20.5 CTL DOMAIN-CONTAINING PROTEINS (CTLDCPS) IN
METAZOANS FROM WHOLE-GENOME ANALYSIS 339 20.6 NON-METAZOAN CTLDS: FROM
VIRUSES, BACTERIA AND PROTOZOA 343 20.7 CTLDCPS IN GENOMES OF
PRE-METAZOANS AND PLANTS 344 20.8 CONCLUSIONS 344 REFERENCES 345 21
CARBOHYDRATE-CARBOHYDRATE INTERACTIONS 347 IWONA BUCIOR, MAX M. BURGER,
AND XAVIER FEMANDEZ-BUSQUETS 21.1 MOLECULAR BASIS OF
CARBOHYDRATE-CARBOHYDRATE INTERACTIONS 347 CONTENTS XVII PART FIVE
BIOMEDICAL ASPECTS AND CASE STUDIES 22 DISEASES OF GLYCOSYLATION 365
THIERRY HENNET 22.1 N-GLYCOSYLATION 366 22.2 O-GLYCOSYLATION 372 22.2.1
O-GALNAC GLYCOSYLATION 372 22.2.2 O-MAN GLYCOSYLATION (O-MANNOSYLATION)
374 22.2.3 O-FUC GLYCOSYLATION (O-FUCOSYLATION) 376 22.3
GLYCOSAMINOGLYCANS 377 22.4 GLYCOSPHINGOLIPIDS 379 22.5
GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR 379 22.6 DEFECTS AFFECTING MULTIPLE
CLASSES OF GLYCOSYLATION 380 22.7 TRAFFICKING DISORDERS 383 22.8
CONCLUSIONS 382 REFERENCES 383 23 ANIMAL MODELS TO DELINEATE GLYCAN
FUNCTIONALITY 385 KOICHI HONKE AND NAOYUKI TANIGUCHI 23.1 KNOCKOUT MOUSE
385 23.2 SPECIFIC FEATURES OF GLYCOGENE KO 387 23.2.1 RELATIONSHIP
BETWEEN GLYCOGENES AND RELATED GLYCANS 387 23.2.2 FUNCTIONAL ASSOCIATION
OF GLYCOGENES 390 23.2.3 WHICH ARE ESSENTIAL-GLYCANS OR THEIR CARRIERS?
392 23.2.4 EFFECTS OF ELIMINATION OF THE CORE AND TERMINAL STRUCTURES OF
GLYCAN XVIII CONTENTS 25 GLYCANS AS FUNCTIONAL MARKERS IN MALIGNANCY?
479 SABINE ANDRE, JUERGEN KOPITZ, HERBERT KALTNER, ANTONIO VILLALOBO, AND
HANS-JOACHIM CABIUS 25.1 THE PAST 420 25.2 THE PRESENT 421 25.3 THE
FUTURE 430 25.4 CONCLUSIONS 430 REFERENCES 433 26 SMALL IS BEAUTIFUL:
MINI-LECTINS IN HOST DEFENSE 433 ROBERT I. LEHRER 26.1 MEET THE FAMILIES
433 26.2 WHERE DO A- AND SS-DEFENSINS RESIDE? 435 26.3 INTRODUCING
6-DEFENSINS 436 26.4 INTRODUCING RETROCYDINS 437 26.5 HEMAGGLUTINATION
438 26.6 HOW HIV-1 ENTERS TARGET CELLS 440 26.7 STUDIES WITH INFLUENZA A
VIRUS 443 26.8 A TOXIC SIDE-TRIP 442 26.9 AND NOW, THE SURPRISE 442
26.10 IT TAKES TWO TO TANGLE 443 26.11 WHICH HUMAN A- AND 9-DEFENSINS
ARE LECTINS? 443 26.12 CONCLUSIONS 445 REFERENCES 445 27 INFLAMMATION
AND GLYCOSCIENCES 447 REINHARD SCHWARTZ-ALBIEZ 27.1 SEQUENCE OF EVENTS
448 27. CONTENTS XIX 28.3 DIABETES 476 28.4 CARBOHYDRATE-BASED
ANTIBACTERIAL AGENTS 477 28.5 CARBOHYDRATE-BASED ANTITHROMBOTIC AGENTS
480 28.6 CONCLUSIONS 482 REFERENCES 482 29 PLATELET GLYCOPROTEINS AS
LECTINS IN HEMATOLOGY 485 KARIN HOFFMEISTER AND HERVE FALET 29.1
PLATELET PHYSIOLOGY 485 29.2 GPIB-IX-V COMPLEX 487 29.3 COLD-INDUCED
PLATELET CLEARANCE 488 29A LONG-TERM PLATELET REFRIGERATION MAY REVEAL
NEW INSIGHTS INTO PLATELET CLEARANCE 490 29.5 P-SELECTIN AND PSGL-1 493
29.6 CONCLUSIONS 492 REFERENCES 493 30 NEUROBIOLOGY MEETS GLYCOSCIENCES
495 ROBERT W. LEDEEN AND CUSHENG WU 30.1 GLUCOSE AND GLYCOGEN AS ENERGY
SOURCES 497 30.2 GANGLIOSIDES AS PRIMARY GLYCANS OF THE NERVOUS SYSTEM
497 30.3 GANGLIOSIDE METABOLISM 499 30.4 GANGLIOSIDES OF THE PERIPHERAL
NERVOUS SYSTEM 502 30.5 GANGLIOSIDE FUNCTIONAL ACTIVITIES 503 30.6
NEURAL GLYCOPROTEINS: OVERVIEW 506 30.7 NEURAL RECOGNITION GLYCOPROTEINS
507 |
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| illustrated | Illustrated |
| indexdate | 2024-07-20T10:21:30Z |
| institution | BVB |
| isbn | 9783527320899 352732089X |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-018628415 |
| oclc_num | 455784755 458680414 |
| open_access_boolean | |
| owner | DE-19 DE-BY-UBM DE-20 DE-91G DE-BY-TUM DE-91S DE-BY-TUM DE-11 DE-355 DE-BY-UBR DE-188 DE-1029 DE-83 |
| owner_facet | DE-19 DE-BY-UBM DE-20 DE-91G DE-BY-TUM DE-91S DE-BY-TUM DE-11 DE-355 DE-BY-UBR DE-188 DE-1029 DE-83 |
| physical | XXVIII, 569 S. Ill., graph. Darst. 25 cm |
| publishDate | 2009 |
| publishDateSearch | 2009 |
| publishDateSort | 2009 |
| publisher | Wiley-VCH |
| record_format | marc |
| spelling | The sugar code fundamentals of glycosciences ed. by Hans-Joachim Gabius Weinheim Wiley-VCH 2009 XXVIII, 569 S. Ill., graph. Darst. 25 cm txt rdacontent n rdamedia nc rdacarrier Carbohydrate Metabolism Carbohydrates Glycoconjugates Glycosylation Lectins Glykobiologie (DE-588)7554628-0 gnd rswk-swf Glykobiologie (DE-588)7554628-0 s DE-604 Gabius, Hans-Joachim 1955-2021 Sonstige (DE-588)172090679 oth text/html http://deposit.dnb.de/cgi-bin/dokserv?id=3089597&prov=M&dok_var=1&dok_ext=htm Inhaltstext DNB Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=018628415&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | The sugar code fundamentals of glycosciences Carbohydrate Metabolism Carbohydrates Glycoconjugates Glycosylation Lectins Glykobiologie (DE-588)7554628-0 gnd |
| subject_GND | (DE-588)7554628-0 |
| title | The sugar code fundamentals of glycosciences |
| title_auth | The sugar code fundamentals of glycosciences |
| title_exact_search | The sugar code fundamentals of glycosciences |
| title_full | The sugar code fundamentals of glycosciences ed. by Hans-Joachim Gabius |
| title_fullStr | The sugar code fundamentals of glycosciences ed. by Hans-Joachim Gabius |
| title_full_unstemmed | The sugar code fundamentals of glycosciences ed. by Hans-Joachim Gabius |
| title_short | The sugar code |
| title_sort | the sugar code fundamentals of glycosciences |
| title_sub | fundamentals of glycosciences |
| topic | Carbohydrate Metabolism Carbohydrates Glycoconjugates Glycosylation Lectins Glykobiologie (DE-588)7554628-0 gnd |
| topic_facet | Carbohydrate Metabolism Carbohydrates Glycoconjugates Glycosylation Lectins Glykobiologie |
| url | http://deposit.dnb.de/cgi-bin/dokserv?id=3089597&prov=M&dok_var=1&dok_ext=htm http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=018628415&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
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