Farming human pathogens: ecological resilience and evolutionary process
Saved in:
| Main Authors: | , , |
|---|---|
| Format: | Book |
| Language: | English |
| Published: |
Dordrecht [u.a.]
Springer
2009
|
| Subjects: | |
| Online Access: | Inhaltsverzeichnis |
| Physical Description: | IX, 216 S. graph. Darst. |
| ISBN: | 9780387922126 0387922121 |
Staff View
MARC
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| 100 | 1 | |a Wallace, Rodrick |e Verfasser |4 aut | |
| 245 | 1 | 0 | |a Farming human pathogens |b ecological resilience and evolutionary process |c Rodrick Wallace ; Deborah Wallace ; Robert G. Wallace |
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Record in the Search Index
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|---|---|
| adam_text | Contents
Introduction
............................................... 1
1.1
Ecosystems as information sources
......................... 3
1.1.1
Coarse-graining a simple model
..................... 3
1.1.2
Ecosystems and information
........................ 5
1.2
Cognition as an information source
........................ 8
1.2.1
Immune cognition
................................. 12
1.2.2
Tumor control
.................................... 14
1.2.3
A cognitive paradigm for gene expression
............. 14
1.3
Darwinian genetic inheritance as an information source
....... 18
Formal theory 1
............................................ 21
2.1
The cognitive modular network symmetry groupoid
.......... 21
2.2
Global and local symmetry groupoids
...................... 23
2.3
Internal forces breaking the symmetry groupoid
............. 25
2.4
External forces breaking the symmetry groupoid
............ 27
2.5
Emergence in information systems as a phase transition
...... 28
2.6
Multiple workspaces: topological tuning
.................... 29
2.7
Phenomenological Landau theory
.......................... 32
2.8
The dynamical groupoid: Phenomenological Onsager theory.
.. 34
2.9
Tuning the network of dynamic manifolds
.................. 41
2.10
The rate distortion manifold
.............................. 41
2.11
No free lunch
........................................... 48
2.12
Mesoscale resonance: Many Baldwin effects
................. 50
2.13
Directed homotopy
...................................... 51
2.14
Pathologies of gene expression
............................. 54
2.15
Traveling waves on cognitive modular networks
.............. 57
Formal theory II
........................................... 63
3.1
The mean field model
.................................... 63
3.2
Biological renormalization
................................ 66
3.3
Universality class distribution
............................. 71
VIII Contents
3.4
Punctuated universality class tuning
....................... 72
3.5
Another network of dynamic manifolds and its tuning
........ 75
3.6
Evolutionary implications of multiple models
................ 75
4
Coevolution
............................................... 77
4.1
The basic idea
.......................................... 77
4.2
Fragmentation and coalescence
............................ 77
4.3
Recursive interaction
..................................... 83
4.4
Extending the model
..................................... 86
4.5
The large deviations formalism
............................ 89
4.6
Farming a coevolutionary system
.......................... 94
5
Eigen s paradox
............................................ 97
5.1
Introduction
............................................ 97
5.2
Reconsidering the
Eigen
model
............................ 99
5.3
Capacity of a parallel channel
.............................102
5.4
Rate distortion dynamics
.................................102
5.5
Rate distortion coevolution
...............................105
6
Farming human pathogens
.................................109
6.1
Culture and the infection phenotype: a modeling exercise
.....109
6.1.1
Introduction
......................................110
6.1.2
Universality class tuning
...........................112
6.1.3
The adaptive mutator
..............................114
6.1.4
Population stress and pathogen response
.............115
6.1.5
The phenotype coevolution ratchet
..................117
6.1.6
Implications of the model
..........................118
6.2
Culture and the infection phenotype: case histories
..........121
6.2.1
Introduction
......................................121
6.2.2
Genes, cognition, and culture
.......................122
6.2.3
Immune cognition and culture
......................123
6.2.4
Malaria and the Fulani
.............................124
6.2.5
Heterosexual AIDS in Northern New Jersey
.........127
6.2.6
Conclusions and speculations
.......................129
6.3
Multiple Drug Resistant
HIV
in New York
..................131
6.3.1
Introduction
......................................131
6.3.2
Evolutionary biology of
HIV........................135
6.3.3
Hierarchical diffusion
..............................137
6.4
Avian influenza
.........................................141
6.4.1
Panic in the city
..................................141
6.4.2
Farming deadly influenza
...........................143
6.4.3
The political virology of offshore farming
.............145
6.4.4
Why Guangdong? Why
1997?.......................149
6.4.5 700
million chickens
...............................151
6.4.6
Asian financial flu
.................................155
Contents
IX
6.4.7
Layers of complication
.............................157
6.4.8
The political will for an epidemiological way?
.........159
7
Final Remarks
.............................................163
8
Mathematical Appendix I
.................................169
8.1
The Shannon-McMillan Theorem
..........................169
8.2
The Rate Distortion Theorem
.............................171
8.3
Morse Theory
...........................................174
8.4
Geodesic flows
..........................................176
9
Mathematical Appendix II
................................181
9.1
Martingales
.............................................181
9.2
Nested Martingales
......................................183
9.3
The Martingale Transform
................................184
9.4
Stochastic Differential Equations
..........................185
10
References
.................................................191
Index
..........................................................215
|
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| dewey-ones | 570 - Biology |
| dewey-raw | 570 |
| dewey-search | 570 |
| dewey-sort | 3570 |
| dewey-tens | 570 - Biology |
| discipline | Biologie Informatik Medizin |
| format | Book |
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| illustrated | Illustrated |
| indexdate | 2024-07-09T21:41:58Z |
| institution | BVB |
| isbn | 9780387922126 0387922121 |
| language | English |
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| oclc_num | 310401099 |
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| owner_facet | DE-355 DE-BY-UBR |
| physical | IX, 216 S. graph. Darst. |
| publishDate | 2009 |
| publishDateSearch | 2009 |
| publishDateSort | 2009 |
| publisher | Springer |
| record_format | marc |
| spelling | Wallace, Rodrick Verfasser aut Farming human pathogens ecological resilience and evolutionary process Rodrick Wallace ; Deborah Wallace ; Robert G. Wallace Dordrecht [u.a.] Springer 2009 IX, 216 S. graph. Darst. txt rdacontent n rdamedia nc rdacarrier Microbial ecology Pathogenic microorganisms Pathogener Mikroorganismus (DE-588)4044890-3 gnd rswk-swf Ökologie (DE-588)4043207-5 gnd rswk-swf Pathogener Mikroorganismus (DE-588)4044890-3 s Ökologie (DE-588)4043207-5 s b DE-604 Wallace, Deborah Verfasser aut Wallace, Robert G. Verfasser aut Digitalisierung UB Regensburg application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=017684895&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Wallace, Rodrick Wallace, Deborah Wallace, Robert G. Farming human pathogens ecological resilience and evolutionary process Microbial ecology Pathogenic microorganisms Pathogener Mikroorganismus (DE-588)4044890-3 gnd Ökologie (DE-588)4043207-5 gnd |
| subject_GND | (DE-588)4044890-3 (DE-588)4043207-5 |
| title | Farming human pathogens ecological resilience and evolutionary process |
| title_auth | Farming human pathogens ecological resilience and evolutionary process |
| title_exact_search | Farming human pathogens ecological resilience and evolutionary process |
| title_full | Farming human pathogens ecological resilience and evolutionary process Rodrick Wallace ; Deborah Wallace ; Robert G. Wallace |
| title_fullStr | Farming human pathogens ecological resilience and evolutionary process Rodrick Wallace ; Deborah Wallace ; Robert G. Wallace |
| title_full_unstemmed | Farming human pathogens ecological resilience and evolutionary process Rodrick Wallace ; Deborah Wallace ; Robert G. Wallace |
| title_short | Farming human pathogens |
| title_sort | farming human pathogens ecological resilience and evolutionary process |
| title_sub | ecological resilience and evolutionary process |
| topic | Microbial ecology Pathogenic microorganisms Pathogener Mikroorganismus (DE-588)4044890-3 gnd Ökologie (DE-588)4043207-5 gnd |
| topic_facet | Microbial ecology Pathogenic microorganisms Pathogener Mikroorganismus Ökologie |
| url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=017684895&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
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