Bioinformatics for DNA sequence analysis:
Saved in:
| Format: | Book |
|---|---|
| Language: | English |
| Published: |
New York, NJ
Humana
2009
|
| Series: | Methods in molecular biology
537 |
| Subjects: | |
| Online Access: | Inhaltsverzeichnis |
| Physical Description: | XIII, 354 S. Ill., graph. Darst. |
| ISBN: | 9781588299109 |
Staff View
MARC
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| 245 | 1 | 0 | |a Bioinformatics for DNA sequence analysis |c ed. by David Posada |
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Record in the Search Index
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|---|---|
| adam_text | Contents
Preface
............................................................
vii
Contributors
........................................................ xi
1.
Similarity Searching Using BLAST
..................................... 1
Kit J. Menlove, Mark Clement, and Keith A. Crandall
2.
Gene Orthology Assessment with OrthologID
............................ 23
Mary Egan, Ernest K. Lee, Joanna
С
Chiu,
Gloria Coruzzi,
and Rob DeSalle
3.
Multiple Alignment of
DNA
Sequences with MAPFT
...................... 39
Kazutaka Katoh, George Asimenos, and Hiroyuki Toh
4.
SeqVis: A Tool for Detecting Compositional Heterogeneity Among Aligned
Nucleotide Sequences
............................................... 65
Lars Sommer
Jermiin, Joshua Wing
Kei
Ho, Kwok Wai
Lau,
and Vivek Jayaswal
5.
Selection of Models of
DNA
Evolution with j ModelTest
................... 93
David Posada
6.
Estimating Maximum Likelihood Phylogenies with PhyML
.................. 113
Stephane
Guinden,
Frederic Delsuc,
Jean-François
Dufayard,
and Olivier Gascuel
7.
Trees from Trees: Construction of Phylogenetic Supertrees Using Clann
....... 139
Christopher J. Creevey and James 0. Mclnerney
8.
Detecting Signatures of Selection from
DNA
Sequences Using Datamonkey
..... 163
ArtF.Y.
Poon,
Simon
D.W.
Frost, and Sergei L. Kosakovsky Pond
9.
Recombination Detection and Analysis Using RDP3
....................... 185
Darren P. Martin
10.
CodonExplorer: An Interactive Online Database for the Analysis
of Codon Usage and Sequence Composition
............................. 207
Jesse Zaneveld,
Micah
Hamady, Noboru Sueoka, and Rob Knight
11.
Genetic Code Prediction for Metazoan Mitochondria with GenDecoder
........ 233
Federico Abascal,
Rafael Zardoya, and David Posada
12.
Computational Gene Annotation in New Genome Assemblies Using GenelD
. . . 243
Enrique Blanco andjosep F.
Abril
13.
Promoter Analysis: Gene Regulatory Motif Identification with
A-GLAM
....... 263
Leonardo Marino-Ramirez,
Kannan
Tharakaraman, John L. Spouge,
and David Landsman
14.
Analysis of Genomic
DNA
with the UCSC Genome Browser
................ 277
Jonathan Pevsner
15.
Mining for SNPs and SSRs Using SNPServer
,
dbSNP
and
SSR
Taxonomy Tree
............................................ 303
Jacqueline Batley and David Edwards
ІХ
χ
Contents
16.
Analysis of Transposable Element Sequences Using CENSOR
and RepeatMasker
.................................................. 323
Ahsan Huda and I. King Jordan
17. DNA
Sequence Polymorphism Analysis Using DnaSP
...................... 337
Julio
Rozas
Index
............................................................. 351
|
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| id | DE-604.BV035294081 |
| illustrated | Illustrated |
| indexdate | 2024-07-09T21:30:38Z |
| institution | BVB |
| isbn | 9781588299109 |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-017099077 |
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| physical | XIII, 354 S. Ill., graph. Darst. |
| publishDate | 2009 |
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| publishDateSort | 2009 |
| publisher | Humana |
| record_format | marc |
| series | Methods in molecular biology |
| series2 | Methods in molecular biology |
| spelling | Bioinformatics for DNA sequence analysis ed. by David Posada New York, NJ Humana 2009 XIII, 354 S. Ill., graph. Darst. txt rdacontent n rdamedia nc rdacarrier Methods in molecular biology 537 Bioinformatics Laboratory manuals Computational Biology methods Nucleotide sequence Laboratory manuals Sequence Analysis, DNA methods Bioinformatik (DE-588)4611085-9 gnd rswk-swf DNS-Sequenz (DE-588)4150352-1 gnd rswk-swf Untersuchungsmethode (DE-588)4324907-3 gnd rswk-swf Chemische Analyse (DE-588)4009840-0 gnd rswk-swf (DE-588)4143413-4 Aufsatzsammlung gnd-content DNS-Sequenz (DE-588)4150352-1 s Chemische Analyse (DE-588)4009840-0 s Bioinformatik (DE-588)4611085-9 s Untersuchungsmethode (DE-588)4324907-3 s DE-604 Posada, David Sonstige oth Methods in molecular biology 537 (DE-604)BV035362695 537 Digitalisierung UB Regensburg application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=017099077&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Bioinformatics for DNA sequence analysis Methods in molecular biology Bioinformatics Laboratory manuals Computational Biology methods Nucleotide sequence Laboratory manuals Sequence Analysis, DNA methods Bioinformatik (DE-588)4611085-9 gnd DNS-Sequenz (DE-588)4150352-1 gnd Untersuchungsmethode (DE-588)4324907-3 gnd Chemische Analyse (DE-588)4009840-0 gnd |
| subject_GND | (DE-588)4611085-9 (DE-588)4150352-1 (DE-588)4324907-3 (DE-588)4009840-0 (DE-588)4143413-4 |
| title | Bioinformatics for DNA sequence analysis |
| title_auth | Bioinformatics for DNA sequence analysis |
| title_exact_search | Bioinformatics for DNA sequence analysis |
| title_full | Bioinformatics for DNA sequence analysis ed. by David Posada |
| title_fullStr | Bioinformatics for DNA sequence analysis ed. by David Posada |
| title_full_unstemmed | Bioinformatics for DNA sequence analysis ed. by David Posada |
| title_short | Bioinformatics for DNA sequence analysis |
| title_sort | bioinformatics for dna sequence analysis |
| topic | Bioinformatics Laboratory manuals Computational Biology methods Nucleotide sequence Laboratory manuals Sequence Analysis, DNA methods Bioinformatik (DE-588)4611085-9 gnd DNS-Sequenz (DE-588)4150352-1 gnd Untersuchungsmethode (DE-588)4324907-3 gnd Chemische Analyse (DE-588)4009840-0 gnd |
| topic_facet | Bioinformatics Laboratory manuals Computational Biology methods Nucleotide sequence Laboratory manuals Sequence Analysis, DNA methods Bioinformatik DNS-Sequenz Untersuchungsmethode Chemische Analyse Aufsatzsammlung |
| url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=017099077&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
| volume_link | (DE-604)BV035362695 |
| work_keys_str_mv | AT posadadavid bioinformaticsfordnasequenceanalysis |