Molecular interactions of actin: Actin structure and actin-binding proteins
Saved in:
| Format: | Conference Proceeding Book |
|---|---|
| Language: | English |
| Published: |
Berlin [u.a.]
Springer
2001
|
| Series: | Results and problems in cell differentiation
32 |
| Subjects: | |
| Online Access: | Inhaltsverzeichnis |
| Physical Description: | XII, 269 S. Ill. |
| ISBN: | 3540671102 |
Staff View
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Record in the Search Index
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| adam_text | Contents
An Overview of Actin Structure and Actin-Binding Proteins
Cristobal G. dos Remedios and Dave D. Thomas
The Origins of this Book 1
A Historical Perspective of Actin Assembly and Its Interactions .... 1
Divalent Cations, Nucleotides and Actin Structure 2
Helical Parameters of F-Actin Precisely Determined
from X-Ray Fiber Diffraction of Well-Oriented Sols 2
Analysis of Models of F-Actin Using Fluorescence Resonance
Energy Transfer Spectroscopy 3
Microscopic Analysis of Polymerization and Fragmentation
of Individual Actin Filaments 3
Two Conformations of G-Actin Related to Two Conformations
of F-Actin 3
Actin Structure Function Relationships Revealed by Yeast
Molecular Genetics 4
Actin-Binding Proteins: an Overview 4
The ADF/Cofilin Family: Accelerators of Actin Reorganization .... 4
Predicting Interaction Sites Between Glycolytic Enzymes and
Cytoskeletal Proteins Employing the Concepts of the Molecular
Recognition Theory 5
Regulation of the Cytoskeleton Assembly: a Role for a Ternary
Complex of Actin with Two Actin-Binding Proteins 5
Structure of Gelsolin 6
Actin Filament Networks 6
ARPS: Actin-Related Proteins 6
Extracellular Signals and the Cytoskeleton 7
References 7
A Historical Perspective of Actin Assembly and Its Interactions
Fumio Oosawa
Introducton 9
The G-F Transformation 10
F-Actin Structure and Bond Free Energy 11
Dynamics of F-Actin 12
Activation of F-Actin or Thin Filaments 14
VI Contents
Sliding of F-Actin on Myosin 14
Pathway of Free Energy Conversion 15
The State of F-Actin During Sliding 16
Actin in Non-Muscle Cells 18
Future of Actin Research 18
References 19
Divalent Cations, Nucleotides, and Actin Structure
Hanna Strzelecka-Goraszewska
Introduction 23
Effects of Cations on the State and Properties of Actin 24
Tightly Bound Cation-Dependent Conformational Changes
in G-Actin 27
Effects of Polymerizing Salts on G-Actin Conformation:
Monomer Activation 32
Cation-Dependent Differences in F-Actin Structure 34
Conclusions 36
References 37
The Helical Parameters of F-Actin Precisely Determined from X-Ray
Fiber Diffraction of Well-Oriented Sols
Toshiro Oda, Kouji Makino, Ichiro Yamashita, Keiichi Namba,
and Yuichiro Mae da
Structural Analysis of F-Actin 43
Procedures for Recording and Analyzing X-Ray Fiber Diffraction
Patterns from Well-Oriented F-Actin Sols 44
Sample Preparation 44
X-Ray Diffraction 45
Analysis of X-Ray Fiber Diffraction Patterns 45
How to Make Well-Oriented F-Actin Filament Sols 48
Specimens Suitable for X-Ray Fiber Diffraction 48
Effect of the Filament Length 48
Effect of Salt Concentration and pH 49
Effect of Various Kinds of Anions and Cations 49
Practical Procedures - Centrifugation and Magnetic Field 50
Strategy 51
X-Ray Fiber Diffraction Pattern 51
Small-Angle Region (up to the Resolution of 8 A)
of the X-Ray Diagram 52
High-Angle Region (from 8 to 3.4 A) of the Diffraction Pattern 53
Structural Information Obtained from X-Ray Fiber
Diffraction Patterns 53
Helical Structure of F-Actin Filament 53
Pitch of the One-Start Helix 53
Contents VII
Helical Symmetry 54
Extraction of Layer-Line Intensities 54
Relation Between F-Actin Filament Disorienation and the Quality
of Diffraction Patterns 55
Conclusions 56
References 56
Analysis of Models of F-Actin Using Fluorescence Resonance Energy
Transfer Spectroscopy
Pierre D. J. Moens and Cristobal G. dos Remedios
Introduction 59
Protein Preparation 61
Labeling of Cys-374 61
Labeling of the Nucleotide-Binding Site of Unlabeled
and DDPM-Labeled Actin 61
Experimental Design 61
Actin Polymerization and Determination of the Angle-Rintra 61
Actin Polymerization for Rintra-Angle Determination 62
Actin Concentration After Dowex-1 62
Fluorescence Measurements 63
Theoretical Calculations 63
Determination of Cys-374 Radial Coordinate 64
Determination of the Angle-Rintra 64
Determination of the Rintra-Angle 66
Localization of the Probe Bound to Cys-374 68
The Orientation Factor k2 in F-Actin 68
Nucleotide Radial Coordinate 72
Localization of the Probe in the F-Actin Models 73
Do these Results Exclude Any Other Orientation
of the Monomer? 74
Conclusions 75
References 76
Microscopic Analysis of Polymerization and Fragmentation
of Individual Actin Filaments
Shin ichi Ishiwata, Junko Tadashige, Ichiro Masui, Takayuki Nishizaka,
and Kazuhiko Kinosita, Jr
Introduction 79
How to Image the Polymerization (and Fragmentation) Process
of Actin Filaments 81
Visualization of the Polymerization Process of Actin Filaments 82
Measurement of the Polymerization Process of Actin Filaments ... 84
Relation Between Polymerization Rate and Actin Concentration 85
Fragmentation of Actin Filaments: Effect of Anions at High
Ionic Strength 88
VIII Contents
Conclusions 91
References 91
Two Conformations of G-Actin Related to Two Conformations
of F-Actin
Edward H. Egelman and Albina Orlova
Multiple Conformations of F-Actin 95
Different Structural States of G-Actin 95
A Yeast Actin Mutant with an Open Nudeotide Conformation 98
Wild-Type Actin Has a Closed Nudeotide Cleft 98
Differences in F-Actin Reconstruction Are Highly Significant 98
Summary 100
References 100
Actin Structure Function Relationships Revealed
by Yeast Molecular Genetics
Lisa D. Belmont and David G. Drubin
Introduction 103
Probing Actin Structural Changes and Mechanism of Polymerization
and Depolymerization 103
Probing the Nucleotide-Binding Cleft 108
Testing the Hydrophobic Plug Model 109
Introduction of Chemical Probes at Unique Sites 110
Identification of Binding Sites of Proteins and Drugs Ill
Mapping the Binding Sites of Actin Binding Proteins
on the Surface of Actin 112
Mapping the Binding Sites of Drugs on the Surface of Actin 114
Actin Mutants Reveal in Vivo roles of Actin 116
Concluding Remarks 117
References 119
Actin-Binding Proteins: An Overview
Enrique M. De La Cruz
Types of Actin Structures 123
Classification of ABPs 123
The Big Picture and How the Details Define it 126
Components 127
Interactions 127
Regulation and Dynamics 129
Structure 130
Cells and Organisms 131
References 133
Contents IX
The ADF/Cofilin Family: Accelerators of Actin Reorganization
Amy McGough, Brian Pope, and Alan Weeds
Introduction 135
ADF/Cofilin: Distribution in Organisms and Tissues 135
Sequence Analysis 138
Atomic Models of ADF, Cofilin and Actophorin 138
Cofilin/Actin Interactions 141
The Binding Site for Actin on Cofilin 141
The Binding Site for Cofilin on Actin 142
Effect of Cofilin on Actin Structure 144
Effects of ADF/Cofilin on Actin Dynamics in Vitro 146
Regulation of Cofilin Activity 147
Effect of Cofilin on Actin Turnover in Cells 149
Future Directions 150
References 151
Predicting Interaction Sites between Glycolytic Enzymes
and Cytoskeletal Proteins Employing the Concepts
of the Molecular Recognition Theory
R. J. Sheedy and F. M. Clarke
Introduction 155
Molecular Recognition Theory and the Interaction of Actin
and Gelsolin Segment 1 156
Identification of a Potential Actin/GAPDH Interaction Site 158
Analysis of Potential Actin-Binding Site on GAPDH 161
Conclusions 163
References 163
Regulation of the Cytoskeleton Assembly: a Role for a Ternary
Complex of Actin with Two Actin-Binding Proteins
Murat Kekic, Neil J. Nosworthy, Irina Dedova, Charles A. Collyer,
and Cristobal G. dos Remedios
Introduction 165
The Role and Distribution of Actin-Binding Proteins 165
Atomic Structure of Actin 166
Atomic Structure of Actin and Actin-Binding Proteins 166
Where Does Cofilin Bind to Actin? 166
Where Does DNase I Bind to Actin? 167
Ternary Complexes of DNase I and Actin 168
Other Pointed-End-Binding Proteins 169
What Do We Know About Ternary Complexes of Actin,
Cofilin and Other ABPs? 169
Preparation of Actin and Cofilin 170
X Contents
Native Gel Electrophoresis 171
Titration of Cofilin into the Binary Actin-DNase I Complex 171
Titration of Increasing DNase I into the 1:1 Actin-Cofilin Complex... 172
Identification of the Proteins in the Ternary Complex 173
Positive Cooperativity in Ternary Complexes 174
Negative Cooperativity Between Thymosin p4 and Actin 174
Evidence for a Conformational Change in G-Actin 175
Conclusions 177
References 177
Actin Filament Networks
Paul A. Janmey, Jagesh V. Shah, Jay X. Tang, and Thomas P. Stossel
Introduction 181
Viscoelastic Characterization of Actin Networks 183
Viscosity of F-Actin 183
Elasticity of F-Actin 184
Actin-Binding Proteins that Alter Network Formation 185
Cross Linking Proteins 185
Actin Severing and Capping Proteins 187
Comparison with Theories for Semiflexible Polymers 189
Interaction with Other Polymers 191
Actin and Microtubules 192
Actin and Intermediate Filaments 192
Actin and Noncytoplasmic Biopolymers 193
Roles for Network Formation Independent
of Mechanical Strength 193
Actin Networks in Vivo 194
Conclusions 194
References 195
Structure and Function of Gelsolin
Leslie D. Burtnick, Robert C. Robinson and Senyon Choe
The Biochemical Actions of Gelsolin 201
The Structure of Gelsolin 202
Interactions with Actin 206
Conclusions 209
References 209
Arps: Actin-Related Proteins
Laura M. Machesky and Robin C. May
Introduction 213
Arpl: the Dynactin Complex 213
Structure of the Dynactin Complex 215
Contents XI
Vesicle Trafficking 218
Nuclear Migration 219
Spindle Assembly and Orientation 219
Arp2 and Arp3: the Arp2/3 Complex 221
Structure of the Arp2/3 Complex 221
Actin Nucleation and Cross-linking 222
Endocytosis and Cortical Actin Organization 223
Arp4 andArp7/9 225
The SWI/SNF Complex 225
Other Arps 226
Why Does the Cell Have Arps? 226
References 227
Control of the Actin Cytoskeleton by Extracellular Signals
Thomas Beck, Pierre-Alain Delley, and Michael N. Hall
Introduction 231
Saccharomyces Cerevisiae 232
Pheromone-Induced Actin Reorganization 233
CDC42 Effectors Involved in Actin Polarization 234
STE20 234
GICs 236
BNI1 236
Filamentous Growth 236
Growth De- and Re-Polarization in Response
to Environmental Stress 237
Drosophila Melanogaster 238
Dorsal Closure 238
Function of the JNK Pathway in Dorsal Closure 239
Function of the TGF-P Pathway in Dorsal Closure 240
Upstream of Cdc42, Rac and Rho 241
Gastrulation 241
Mammalian Cells 242
Control of Actin Organization by Rho-type GTPases 242
Activation of Rho-Type GTPases by Extracellular Signals 244
Effectors of Cdc42, Racl and Rho A Involved
in Actin Organization 245
WASP and N-WASP 245
PAK and PIX 246
MRCK 247
IQGAP 247
PI 5-Kinase 247
Rho Kinases 248
PRKs 248
Formins 249
XII Contents
... and more 249
Crosstalk: Signalling Between Rho GTPases 249
Cell Migration 250
Subversion of Host Cell Actin Cytoskeleton by Extracellularly-Bound
Bacterial Pathogens 251
References 254
Subject Index 263
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| indexdate | 2024-07-09T22:16:59Z |
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| isbn | 3540671102 |
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| physical | XII, 269 S. Ill. |
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| series | Results and problems in cell differentiation |
| series2 | Results and problems in cell differentiation Results and problems in cell differentation |
| spelling | Molecular interactions of actin Actin structure and actin-binding proteins [Fourth Pentennial Actin Conference held at the new Sheraton Maui in Hawai in 1998] Berlin [u.a.] Springer 2001 XII, 269 S. Ill. txt rdacontent n rdamedia nc rdacarrier Results and problems in cell differentiation 32 Results and problems in cell differentation ... Actin (DE-588)4201876-6 gnd rswk-swf Strukturchemie (DE-588)4183790-3 gnd rswk-swf Actin-bindende Proteine (DE-588)4359634-4 gnd rswk-swf Molekularbiologie (DE-588)4039983-7 gnd rswk-swf (DE-588)4143413-4 Aufsatzsammlung gnd-content Actin (DE-588)4201876-6 s Molekularbiologie (DE-588)4039983-7 s DE-604 Actin-bindende Proteine (DE-588)4359634-4 s Strukturchemie (DE-588)4183790-3 s Dos Remedios, Cristobal G. 1940- Sonstige (DE-588)122027914 oth Actin Conference 4 1997 Sonstige (DE-588)10048410-4 oth (DE-604)BV025292130 1 Results and problems in cell differentiation 32 (DE-604)BV000022913 32 HBZ Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=019277115&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Molecular interactions of actin Results and problems in cell differentiation Actin (DE-588)4201876-6 gnd Strukturchemie (DE-588)4183790-3 gnd Actin-bindende Proteine (DE-588)4359634-4 gnd Molekularbiologie (DE-588)4039983-7 gnd |
| subject_GND | (DE-588)4201876-6 (DE-588)4183790-3 (DE-588)4359634-4 (DE-588)4039983-7 (DE-588)4143413-4 |
| title | Molecular interactions of actin |
| title_auth | Molecular interactions of actin |
| title_exact_search | Molecular interactions of actin |
| title_full | Molecular interactions of actin Actin structure and actin-binding proteins [Fourth Pentennial Actin Conference held at the new Sheraton Maui in Hawai in 1998] |
| title_fullStr | Molecular interactions of actin Actin structure and actin-binding proteins [Fourth Pentennial Actin Conference held at the new Sheraton Maui in Hawai in 1998] |
| title_full_unstemmed | Molecular interactions of actin Actin structure and actin-binding proteins [Fourth Pentennial Actin Conference held at the new Sheraton Maui in Hawai in 1998] |
| title_short | Molecular interactions of actin |
| title_sort | molecular interactions of actin actin structure and actin binding proteins |
| topic | Actin (DE-588)4201876-6 gnd Strukturchemie (DE-588)4183790-3 gnd Actin-bindende Proteine (DE-588)4359634-4 gnd Molekularbiologie (DE-588)4039983-7 gnd |
| topic_facet | Actin Strukturchemie Actin-bindende Proteine Molekularbiologie Aufsatzsammlung |
| url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=019277115&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
| volume_link | (DE-604)BV025292130 (DE-604)BV000022913 |
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