Holdings: Organelle proteomics

Organelle proteomics:

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Bibliographic Details
Format:	Book
Language:	English
Published:	Totowa, NJ Humana Press 2008
Series:	Methods in molecular biology 432
Subjects:	Cell organelles Proteomics Organell Proteomanalyse Aufsatzsammlung
Online Access:	Inhaltsverzeichnis kostenfrei kostenfrei Inhaltsverzeichnis Inhaltsverzeichnis
Physical Description:	XVII, 421 S.
ISBN:	1588297799 9781588297792

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MARC


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Record in the Search Index

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adam_text	CONTENTS PREFACE............................................................... V CONTRIBUTORS . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . XIII 1. ANALYSIS OF ORGANELLES BY ON-UNE TWO-DIMENSIONAL LIQUID CHROMATOGRAPHY-TANDEM MASS SPECTROMETRY .. 1 EDWIN P. ROMIJN AND JOHN R. YATES 111 PART I: ANALYSIS OF ORGANELLES, VESICLES, AND PROTEIN MACHINERIES 2. PURIFICATION AND PROTEOMIC ANALYSIS OF CHLOROPLASTS AND THEIR SUB-ORGANELLAR COMPARTMENTS . . 19 DANIEL SALVI, NORBERT ROLLEND, JACQUES JOYARD, AND MYRIAM FERRO 3. PROTEOMIC ANALYSIS OF THE STACKED GOLGI COMPLEX 37 MARK S. LOWENTHA/, KATHRYN E. HOWELL, AND CHRISTINE C. WU 4. PURIFICATION OF SACCHAROMYCES CEREVISIAE MITOCHONDRIA BY ZONE ELECTROPHORESIS IN A FREE FLOW DEVICE 51 HANS ZISCHKE, NORBERT KINKL, RALF J. BRAUN, AND MARIUS UEFFING 5. PREPARATION OF RESPIRATORY CHAIN COMPLEXES FROM SACCHAROMYCES CEREVISIAE WILD-TYPE AND MUTANT MITOCHONDRIA: ACTIVITY MEASUREMENT AND SUBUNIT COMPOSITION ANALYSIS 65 CLAIRE LEMAIRE AND GENEVIEVE DUJARDIN 6. MITOCHONDRIAL PROTEOMICS: ANALYSIS OF A WHOLE MITOCHONDRIAL EXTRACT WITH TWO-OIMENSIONAJ E1ECTROPHORESIS . 83 THIERRY RABILLOUD 7. PURIFICATION AND PROTEOMIC ANALYSIS OF THE MOUSE LIVER MITOCHONDRIAL INNER MEMBRANE 101 SANDRINE DA CRUZ AND [EEN-CLEUDE MARTINOU IX X CONTENTS 8. SUBCELLULAR FRACTIONATION AND PROTEOMICS OF NUCLEAR ENVELOPES 117 LAURENCE FLORENS, NADIA KORFAJI, AND ERIC C. SCHIRMER 9. PURIFICATION AND PROTEOMIC ANALYSIS OF A NUCLEAR-INSOLUBLE PROTEIN FRACTION 139 TSUNEYOSHI HORIGOME, KAZUHIRO FURUKEWE, END KOHEI ISHII 10. PREPARATION METHODS OF HUMAN METAPHASE CHROMOSOMES FOR THEIR PROTEOME ANALYSIS. . . . .. . .. . . . . .. .. .. 149 KIICHI FUKUI, HIDEAKI TAKATA, END SUSUMU UCHIYAMA 11. PURIFICATION AND PROTEOMIC ANALYSIS OF PLANT PLASMA MEMBRANES 161 ERIK ALEXANDERSSON, NIKLAS GUSTEVSSON, KATJA BEMIUR, ADINE KERLSSON, PER KJELLBOM, AND CHRISTER LARSSON 12. PROTOCOL TO ENRICH AND ANALYZE PLASMA MEMBRANE PROTEINS FROM FROZEN TISSUES 175 JACEK R. WISNIEWSKI 13. PROTEOMIC CHARACTERIZATION OF MEMBRANE PROTEIN TOPOLOGY 185 ADELE R. BLACK/ER AND CHRISTINE C. WU 14. FREE FLOW ISOELECTRIC FOCUSING: A METHOD FOR THE SEPARATION OF BOTH HVDROPBILIC AND HYDROPHOBIE PROTEINS OF RAT LIVER PEROXISOMES 199 MARKUS ISLINGER AND GERHARD WEBER 15. USE OF GAS-PHASE FRACTIONATION TO INCREASE PROTEIN IDENTIFICATIONS: APPLICATION TO THE PEROXISOME 217 JACOB KENNEDY AND EUGENE C. YI 16. PURIFICATION AND PROTEOMIC ANALYSIS OF LYSOSOMAL INTEGRAL MEMBRANE PROTEINS 229 HUIWEN ZHENG, XIAOLIAN FAN, RICK BEGSHEW, DON J. MEHUREN, AND JOHN W. CALLAHAN 17. AFFINITY PURIFICATION OF SOLUBLE LYSOSOMAL PROTEINS FOR MASS SPECTROMETRIC IDENTIFICATION 243 SY/VIE KIEFFER-JAQUINOD, AGNES CHEPEL, JEROME GERIN, AND AGNES JOURNET 18. PURIFICATION AND PROTEOMIC ANALYSIS OF SYNAPTIC VESICLES 259 HOLLY D. COX AND CHARIES M. THOMPSON CONTENTS XI 19. PURIFICATION AND PROTEOMICS ANALYSIS OF PANCREATIC ZYMOGEN GRANULE MEMBRANES 275 XUEQUN CHEN AND PHILIP C. ANDREWS 20. ISOLATION AND PROTEOMIC ANALYSIS OF CHLAMYDOMONAS CENTRIOLES ... 289 LANI C. KELLER AND WALLACE F. MARSHALL 21. PURIFICATION AND PROTEOMIC ANALYSIS OF 20S PROTEASOMES FROM HUMAN CELLS 301 MARIE-PIERRE BOUSQUET-DUBOUCH, SANDRINE UTTENWEILER-LOSEPH, MANUELLE DUCOUX-PETIT, MARIETTE MATONDO, BERNARD MONSARRAT, AND ODILE BURLET-SCHI/TZ 22. CHARACTERIZATION OF E. EOLI RIBOSOMAL PARTICLES: COMBINED ANALYSIS OF WHOLE PROTEINS BY MASS SPEETROMETRY AND OF PROTEOLYTIE DIGESTS BY LIQUID CHROMATOGRAPHY-TANDEM MASS SPEETROMETRY 321 ISABELLE LOST, ]ULIE CHAROLLAIS, LOELLE VINH, AND DELPHINE PFLIEGER PART 11: PROTEINS IOENTIFIEO IN THE ORGANELLE SAMPLE: TRUE COMPONENTS OR CONTAMINANTS? 23. ASSESSMENT OF ORGANELLE PURITY USING ANTIBODIES AND SPECIFIC ASSAYS: THE EXAMPLE OF THE CHLOROPLAST ENVELOPE 345 DANIEL SELVI, NORBERT ROLLEND, ]ACQUES ]OYARD, AND MYRIAM FERRO 24. IDENTIFYING BONA FIDE COMPONENTS OF AN ORGANELLE BY ISOTOPE-CODED LABELING OF SUBCELLULAR FRACTIONS: AN EXAMPLE IN PEROXISOMES 357 MARCELLO MARELLI, ALEXEY I. NESVIZHSKII, ANDLOHN D. AITCHISON 25. DETERMINATION OF GENUINE RESIDENTS OF PLANT ENDOMEMBRANE ORGANELLES USING ISOTOPE TAGGING AND MULTIVARIATE STATISTICS .... 373 KATHRYN S. LI/LEY AND TOM P. ]. DUNKLEY 26. QUANTITATIVE PROTEOMIC ANALYSIS TO PROFILE DYNAMIC CHANGES IN THE SPATIAL DISTRIBUTION OF CELLULAR PROTEINS 389 WEI YAN, DAEHEE HWANG, AND RUEDI AEBERSOLD 27. USE OF TRANSCRIPTOMIC DATA TO SUPPORT ORGANELLE PROTEOMIC ANALYSIS 403 WALLACE F. MARSHALL INDEX.................................... 415
adam_txt	CONTENTS PREFACE. V CONTRIBUTORS . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . XIII 1. ANALYSIS OF ORGANELLES BY ON-UNE TWO-DIMENSIONAL LIQUID CHROMATOGRAPHY-TANDEM MASS SPECTROMETRY . 1 EDWIN P. ROMIJN AND JOHN R. YATES 111 PART I: ANALYSIS OF ORGANELLES, VESICLES, AND PROTEIN MACHINERIES 2. PURIFICATION AND PROTEOMIC ANALYSIS OF CHLOROPLASTS AND THEIR SUB-ORGANELLAR COMPARTMENTS . . 19 DANIEL SALVI, NORBERT ROLLEND, JACQUES JOYARD, AND MYRIAM FERRO 3. PROTEOMIC ANALYSIS OF THE STACKED GOLGI COMPLEX 37 MARK S. LOWENTHA/, KATHRYN E. HOWELL, AND CHRISTINE C. WU 4. PURIFICATION OF SACCHAROMYCES CEREVISIAE MITOCHONDRIA BY ZONE ELECTROPHORESIS IN A FREE FLOW DEVICE 51 HANS ZISCHKE, NORBERT KINKL, RALF J. BRAUN, AND MARIUS UEFFING 5. PREPARATION OF RESPIRATORY CHAIN COMPLEXES FROM SACCHAROMYCES CEREVISIAE WILD-TYPE AND MUTANT MITOCHONDRIA: ACTIVITY MEASUREMENT AND SUBUNIT COMPOSITION ANALYSIS 65 CLAIRE LEMAIRE AND GENEVIEVE DUJARDIN 6. MITOCHONDRIAL PROTEOMICS: ANALYSIS OF A WHOLE MITOCHONDRIAL EXTRACT WITH TWO-OIMENSIONAJ E1ECTROPHORESIS . 83 THIERRY RABILLOUD 7. PURIFICATION AND PROTEOMIC ANALYSIS OF THE MOUSE LIVER MITOCHONDRIAL INNER MEMBRANE 101 SANDRINE DA CRUZ AND [EEN-CLEUDE MARTINOU IX X CONTENTS 8. SUBCELLULAR FRACTIONATION AND PROTEOMICS OF NUCLEAR ENVELOPES 117 LAURENCE FLORENS, NADIA KORFAJI, AND ERIC C. SCHIRMER 9. PURIFICATION AND PROTEOMIC ANALYSIS OF A NUCLEAR-INSOLUBLE PROTEIN FRACTION 139 TSUNEYOSHI HORIGOME, KAZUHIRO FURUKEWE, END KOHEI ISHII 10. PREPARATION METHODS OF HUMAN METAPHASE CHROMOSOMES FOR THEIR PROTEOME ANALYSIS. . . . . . . . . . . . . . 149 KIICHI FUKUI, HIDEAKI TAKATA, END SUSUMU UCHIYAMA 11. PURIFICATION AND PROTEOMIC ANALYSIS OF PLANT PLASMA MEMBRANES 161 ERIK ALEXANDERSSON, NIKLAS GUSTEVSSON, KATJA BEMIUR, ADINE KERLSSON, PER KJELLBOM, AND CHRISTER LARSSON 12. PROTOCOL TO ENRICH AND ANALYZE PLASMA MEMBRANE PROTEINS FROM FROZEN TISSUES 175 JACEK R. WISNIEWSKI 13. PROTEOMIC CHARACTERIZATION OF MEMBRANE PROTEIN TOPOLOGY 185 ADELE R. BLACK/ER AND CHRISTINE C. WU 14. FREE FLOW ISOELECTRIC FOCUSING: A METHOD FOR THE SEPARATION OF BOTH HVDROPBILIC AND HYDROPHOBIE PROTEINS OF RAT LIVER PEROXISOMES 199 MARKUS ISLINGER AND GERHARD WEBER 15. USE OF GAS-PHASE FRACTIONATION TO INCREASE PROTEIN IDENTIFICATIONS: APPLICATION TO THE PEROXISOME 217 JACOB KENNEDY AND EUGENE C. YI 16. PURIFICATION AND PROTEOMIC ANALYSIS OF LYSOSOMAL INTEGRAL MEMBRANE PROTEINS 229 HUIWEN ZHENG, XIAOLIAN FAN, RICK BEGSHEW, DON J. MEHUREN, AND JOHN W. CALLAHAN 17. AFFINITY PURIFICATION OF SOLUBLE LYSOSOMAL PROTEINS FOR MASS SPECTROMETRIC IDENTIFICATION 243 SY/VIE KIEFFER-JAQUINOD, AGNES CHEPEL, JEROME GERIN, AND AGNES JOURNET 18. PURIFICATION AND PROTEOMIC ANALYSIS OF SYNAPTIC VESICLES 259 HOLLY D. COX AND CHARIES M. THOMPSON CONTENTS XI 19. PURIFICATION AND PROTEOMICS ANALYSIS OF PANCREATIC ZYMOGEN GRANULE MEMBRANES 275 XUEQUN CHEN AND PHILIP C. ANDREWS 20. ISOLATION AND PROTEOMIC ANALYSIS OF CHLAMYDOMONAS CENTRIOLES . 289 LANI C. KELLER AND WALLACE F. MARSHALL 21. PURIFICATION AND PROTEOMIC ANALYSIS OF 20S PROTEASOMES FROM HUMAN CELLS 301 MARIE-PIERRE BOUSQUET-DUBOUCH, SANDRINE UTTENWEILER-LOSEPH, MANUELLE DUCOUX-PETIT, MARIETTE MATONDO, BERNARD MONSARRAT, AND ODILE BURLET-SCHI/TZ 22. CHARACTERIZATION OF E. EOLI RIBOSOMAL PARTICLES: COMBINED ANALYSIS OF WHOLE PROTEINS BY MASS SPEETROMETRY AND OF PROTEOLYTIE DIGESTS BY LIQUID CHROMATOGRAPHY-TANDEM MASS SPEETROMETRY 321 ISABELLE LOST, ]ULIE CHAROLLAIS, LOELLE VINH, AND DELPHINE PFLIEGER PART 11: PROTEINS IOENTIFIEO IN THE ORGANELLE SAMPLE: TRUE COMPONENTS OR CONTAMINANTS? 23. ASSESSMENT OF ORGANELLE PURITY USING ANTIBODIES AND SPECIFIC ASSAYS: THE EXAMPLE OF THE CHLOROPLAST ENVELOPE 345 DANIEL SELVI, NORBERT ROLLEND, ]ACQUES ]OYARD, AND MYRIAM FERRO 24. IDENTIFYING BONA FIDE COMPONENTS OF AN ORGANELLE BY ISOTOPE-CODED LABELING OF SUBCELLULAR FRACTIONS: AN EXAMPLE IN PEROXISOMES 357 MARCELLO MARELLI, ALEXEY I. NESVIZHSKII, ANDLOHN D. AITCHISON 25. DETERMINATION OF GENUINE RESIDENTS OF PLANT ENDOMEMBRANE ORGANELLES USING ISOTOPE TAGGING AND MULTIVARIATE STATISTICS . 373 KATHRYN S. LI/LEY AND TOM P. ]. DUNKLEY 26. QUANTITATIVE PROTEOMIC ANALYSIS TO PROFILE DYNAMIC CHANGES IN THE SPATIAL DISTRIBUTION OF CELLULAR PROTEINS 389 WEI YAN, DAEHEE HWANG, AND RUEDI AEBERSOLD 27. USE OF TRANSCRIPTOMIC DATA TO SUPPORT ORGANELLE PROTEOMIC ANALYSIS 403 WALLACE F. MARSHALL INDEX. 415
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spellingShingle	Organelle proteomics Methods in molecular biology Cell organelles Proteomics Organell (DE-588)4043772-3 gnd Proteomanalyse (DE-588)4596545-6 gnd
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title	Organelle proteomics
title_auth	Organelle proteomics
title_exact_search	Organelle proteomics
title_exact_search_txtP	Organelle proteomics
title_full	Organelle proteomics ed. by Delphine Pflieger ...
title_fullStr	Organelle proteomics ed. by Delphine Pflieger ...
title_full_unstemmed	Organelle proteomics ed. by Delphine Pflieger ...
title_short	Organelle proteomics
title_sort	organelle proteomics
topic	Cell organelles Proteomics Organell (DE-588)4043772-3 gnd Proteomanalyse (DE-588)4596545-6 gnd
topic_facet	Cell organelles Proteomics Organell Proteomanalyse Aufsatzsammlung
url	http://swbplus.bsz-bw.de/bsz278908195inh.htm http://www.loc.gov/catdir/enhancements/fy0825/2007941655-d.html http://www.loc.gov/catdir/enhancements/fy0825/2007941655-t.html http://www.gbv.de/dms/hbz/toc/ht015388568.pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=016363094&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA
volume_link	(DE-604)BV035362695
work_keys_str_mv	AT pfliegerdelphine organelleproteomics

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