Soil microbiology, ecology, and biochemistry:
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| Previous Title: | Paul, Eldor A. Soil microbiology and biochemistry |
|---|---|
| Format: | Book |
| Language: | English |
| Published: |
Amsterdam [u.a.]
Acad. Press
2007
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| Edition: | 3. ed. |
| Subjects: | |
| Online Access: | Inhaltsverzeichnis |
| Physical Description: | XX, 532 S. Ill., graph. Darst. |
| ISBN: | 9780125468077 0125468075 |
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| 245 | 1 | 0 | |a Soil microbiology, ecology, and biochemistry |c ed. Eldor A. Paul |
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Record in the Search Index
| _version_ | 1804135695210512384 |
|---|---|
| adam_text | CONT NTS UNIVERSITAET FUER BOP~RKLJLTUR WIEN INSTITUT FUER
~,ODERRFO~ SCHUNG , PETER-JORD~N.::STR. 82, ) -1190 WIEN INV.NA~: G 13
3~ / T CONTR I B UTORS XVII PREFACE XIX PART I BACKGROUND 1 SOLL
MICROBIOLOGY, ECOLOGY AND BIOCHEMISTRY IN PERSPECTIVE E. AE. PAUL GENERAL
HISTORY AND SCOPE 3 SOIL MICROBIOLOGY 5 SOIL ECOLOGY 10 SOIL
BIOCHEMISTRY 13 IN PERSPECTIVE 19 REFERENCES AND SUGGESTED READING 21 V
VI 2 THE SOLL HABITAT R. P. VORONEY CONTENTS INTRODUCTION 25 SOIL
GENESIS AND FORMATION OF THE SOIL HABITAT 26 SOUPROFILE 29
PHYSICALASPECTS OF SOIL 29 SOUTEXTURE 30 SOUSTRUCTURE 32 SOIL HABITAT
SCALE AND OBSERVATION 33 SCALE OFSOU HABITAT 33 PORE SPACE 35 SOIL
SOLUTION CHEMISTRY 39 SOUPH 43 SOUTEMPERATURE 43 SOUWATER CONTENT 45
ENVIRONMENTAL FACTORS, TEMPERATURE AND MOISTURE INTERACTIONS 48
REFERENCES AND SUGGESTED READING 49 PART I I SOLL BIOTA 3 PHYSIOLOGICAL
AND BIOCHEMICAL METHODS FOR STUDYING SOLL BIOTA AND THEIR FUNCTION E.
KANDELER INTRODUCTION 53 SCALE OF INVESTIGATIONS AND COLLECTION OF
SAMPLES 54 STORAGE AND PRETREATMENT OF SAMPIES 56 MICROBIALBIOMASS 57
CHLOROFORM FUMIGATION INCUBATION AND EXTRACTION METHODS 57
SUBSTRATE-INDUCED RESPIRATION 58 ISOTOPIC COMPOSITION OFMICROBIAL
BIOMASS 58 SIGNATUREMOLEEULES AS A MEASURE OF MICROBIAL BIOMASS AND
MICROBIAL COMMUNITY STRUCTURE 59 CONTENTS ATP AS A MEASURE OFACTIVE
MICROBIAL BIOMASS 59 MICROBIAL MEMBRANE COMPONENTS AND FATTYACIDS 60
RESPIRATORY QUINONES AS A MEASURE OFSTRUCTURAL DIVERSITY 62 ERGOSTEROL
AS A MEASURE OFFUNGAL BIOMASS 63 LIPOPOLYSACCHARIDES, GLYCOPROTEINS, AND
CELL WALLS 64 GROWTH RATES FROM SIGNATUREMOLECULES 65 PHYSIOLOGICAL
ANALYSES 65 CULTURE-BASED STUDIES 65 ISOLATION AND CHARACTERIZATION
OFSPECIFZC ORGANISMS 66 SOUORGANIC MATTER DECOMPOSITION AND RESPIRATION
67 NITROGEN MINERALIZATION 72 ACTIVITIES AND LOCATIONS OF ENZYMES 72
SPECTROPHOTOMETRIC METHODS 73 FLUORESCENCE METHODS 75 TECHNIQUESFOR
IMAGING THE LOCATION OFENZYMES 77 FUNCTIONAL DIVERSITY 77 REFERENCES AND
SUGGESTED READING 80 4 MOLECULAR METHODS FOR STUDYING SOLL ECOLOGY J. E.
THIES INTRODUCTION 85 TYPES AND STRUCTURES OF NUCLEIC ACIDS 86 USE OF
NUCLEIC ACID ANALYSES FOR SOIL ECOLOGY STUDIES 88 DIRECT MOLECULAR
ANALYSIS OF SOHBIOTA 90 NUCLEIC ACID HYBRIDIZATION 90 CONFOCAL
MICROSCOPY 91 BIOSENSORS AND MARKER GENE TECHNOLOGIES 92 EXTRACTION OF
NUCLEIC ACIDS (DNAIRNA) 93 CHOOSING BETWEEN DNA AND RNA FOR SOH ECOLOGY
STUDIES 96 ANALYSIS OF NUCLEIC ACID EXTRACTS 96 DNA:DNA REASSOCIATION
KINETICS 96 MICROARRAYS 98 RESTRIETION FRAGMENTLENGTH POLYMORPHISM
(RFLP)ANALYSIS 100 CLONING 101 DNA SEQUENCING 102 STABLE ISOTOPE PROBING
102 PARTIAL COMMUNITY ANALYSES-PCR-BASED ASSAYS 104 ELECTROPHORESIS
OFNUCLEICACIDS 107 VII VII I CONTENTS PCR FINGERPRINTING 107 SIMILARITY
ANALYSES 112 LEVEL OF RESOLUTION 112 OTHER FACTORS THAT MAY AFFECT
MOLECULAR ANALYSES 113 SAMPLE HANDLING 113 SOIL CHEMICAL FACTORS 113
SAMPLING SCALE 114 SUMMARY 114 REFERENCES 115 5 THE PROKARYOTES K.
KILLHAM AND J. I. PROSSER INTRODUCTION 119 PHYLOGENY 120 CULTIVATED
ORGANISMS 120 UNCUUIVATED ORGANISMS 121 PHYLOGENY AND FUNCTION 125
GENERAL FEATURES OF PROKARYOTES 126 CELL STRUCTURE 127 UNICELLULAR
GROWTH FORMS 127 FILAMENTOUSAND MYCELIAL GROWTH 129 CELL WALLS 129
INTERNAL STRUCTURE 131 MOTILITY 132 METABOLISM AND PHYSIOLOGY 132 CARBON
AND ENERGY SOURCES 132 OXYGENREQUIREMENTS 133 SUBSTRATE UTILIZATION 134
AUTOCHTHONYAND ZYMOGENY 136 OLIGOTROPHY, COPIOTROPHY, AND THE R-K
CONTINUUM 137 FACULTATIVENESS 138 BIODEGRADATION CAPACITY 138 CELLULOSE
138 POLLUTANTS 139 DIFFERENTIATION, SECONDARY METABOLISM, AND ANTIBIOTIC
PRODUCTION 141 CONCLUSIONS 142 REFERENCES AND GENERAL READING 143 FAUNA:
THE ENGINE FOR MICROSIAL ACTIVITY AND TRANSPORT INTRODUCTION 145
CLASSIFICATION, CHARACTERISTICS, AND ECOLOGICAL ROLES IN SOIL 151
FUNGUS-LIKE PROTISTS 151 FUNGI (CHYTRIDIOMYCOTA, GLOMEROMYCOTA,
ZYGOMYCOTA, ASCOMYCOTA, AND BASIDIOMYCOTA) 153 EUKARYOTIC ALGAE 156
REFERENCES AND SUGGESTED READING 158 CONTENTS 6 FUNGI AND EUKARYOTIC
ALGAE R. G. THORN AND M. D. J. LYNCH 7 D. C. COLEMAN AND D. H. WALL
INTRODUCTION 163 THE MICROFAUNA 166 METHODS FOR EXTRACTING AND COUNTING
PROTOZOA 168 IMPACTS OFPROTOZOA ON ECOSYSTEM FUNCTION 168 DISTRIBUTION
OF PROTOZOA IN SOU PROFILES 169 ROTIFERA 169 NEMATODA 170 NEMATODE
FEEDING HABITS 170 ZONES OFNEMATODE ACTIVITY IN SOU 173 NEMATODE
EXTRACTION TECHNIQUES 174 MICROARTHROPODS 174 ENCHYTRAEIDS 175
MACROFAUNA 178 MACROARTHROPODS 178 IMPORTANCE OF THE MACROARTHROPODS 179
OLIGOCHAETA (EARTHWORMS) 179 FORMICIDAE (ANTS) 183 TERMITIDAE (TERMITES)
183 SUMMARY 185 REFERENCES 186 IX X PART 11I CONCEPTS AND INTERACTIONS 8
THE ECOLOGY OF SOLL ORGANLSMS S. J. MORRIS AND C. B. BLACKWOOD
INTRODUETION 195 MEEHANISMS THAT DRIVE COMMUNITY STRUCTURE 197
PHYSIOLOGICALLIMITS 198 INTRASPEEIFIE COMPETITION 199 DISPERSAL IN SPAEE
AND TIME 203 PREDICTING POPULATION GROWTH 204 INTERSPECIFIC COMPETITION
204 DIRECTEFFECTS 01 EXPLOITATION 207 INDIRECTEFFEETS 0/ EXPLOITATION
209 MUTUALISMS 211 ABIOTIC FAETORS 211 CHANGESIN COMMUNITYSTRUCTURE
THROUGH TIME AND SPACE 212 HISTORICAL AND GEOGRAPHIE CONTINGENCY 214
HIERARCHICALCOMMUNITYASSEMBLY RULES 215 EEOSYSTEM DYNAMIES 218
ENERGYFLOW 219 CARBON, NUTRIENT, AND WATER CYCLES 221 EMERGENTPROPERTIES
224 CONC1USION 225 REFERENCES AND SUGGESTED READING 226 9 THE PHYSIOLOGY
AND BIOCHEMISTRY OF SOLL ORGANLSMS W. B. MCGJLL INTRODUETION 231
METABOLIE CLASSIFICATIONS OF SOIL ORGANISMS 233 ELECTRONS AND ATP 234
SUBSTRATE-LEVEL PHOSPHORYLATION 234 CONTENTS CONTENTS XI ELECTRON
TRANSPORT PHOSPHORYLATION 235 OVERVIEW 01 MECHANISMS TO GENERATE ATP AND
REDUCING EQUIVALENTS 238 EXAMPLES OF SOIL MICROBIAL TRANSFORMATIONS 241
NITROGEN FIXATION 241 AEROBIC CHEMOLITHOTROPHIC EXAMPLES 242 OXIDATION
01 REDUCED C 245 HOW CAN THE MICROBIAL CONTRIBUTIONS BE VIEWED IN A
SIMPLIFIED AND UNIFIED CONCEPT? 251 A MODEL OFINTERCONNECTED CYCLES 01
ELECTRONS 252 THE ANOXYGENIC CYCLE 253 THE OXYGENIC CYCLE 253 REFERENCES
256 10 THE ECOLOGY OF PLANT-MICROBIAL MUTUALISMS J. POWELL AND J.
KLIRONOMOS INTRODUCTION 257 ROOTS AS AN INTERFACE FOR PLANT-MICROBIAL
MUTUALISMS 258 MYCORRHIZAL SYMBIOSES 259 SYMBIOSES INVOLVING N-FIXING
ORGANISMS 267 INTERACTIONS AMONG MUTUALISTS 270 INTERACTIONS WITH
PATHOGENS 272 IMPLICATIONS FOR PLANT POPULATIONS AND COMMUNITIES 275
CHALLENGES IN THE STUDY OF INTERACTIONS 276 CONCLUSIONS 277 REFERENCES
AND SUGGESTED READING 279 1 1 SPATIAL DISTRIBUTION OF SOLL ORGANISMS S.
D. FREY INTRODUCTION 283 GEOGRAPHICAL DIFFERENCES IN SOIL BIOTA 285
ASSOCIATION OF SOIL ORGANISMS WITH PLANTS 287 SPATIAL HETEROGENEITY OF
SOIL ORGANISMS 290 XII CONTENTS VERTICAL DISTRIBUTION WITHIN THE
SOHPROFILE 292 MICROSEALE HETEROGENEITY IN MICROBIAL POPULATIONS 296
REFERENCES AND SUGGESTED READING 299 PART IV BIOCHEMISTRY AND
BIOGEOCHEMISTRY 12 CARBON CYCLING AND FORMATION OF SOLL ORGANIC MATTER
W. HORWATH INTRODUCTION 303 LONG-TERM CARBON CYCLE 304 THE SHORT-TERM C
CYCLE 307 ECOSYSTEM C CYCLING 309 COMPOSITION AND TUMOVER OF C INPUTS TO
SOH 312 PLANT AND MICROBIAL LIPIDS 315 STARCH 315 HEMICELLULOSES,
PECTINS, AND CELLULOSE 317 LIGNIN 320 OTHER PLANT CELL WALL
CARBOHYDRATES AND PROTEINS 324 PLANT SECONDARY COMPOUNDS 325 ROOTS AND
ROOT EXUDATES 325 CELL WALLS 0/MICROORGANISMS 327 SOH ORGANIC MATTER 329
SOIL ORGANIC MATTER FORMATION 329 CLASSICAL FRACTIONS 0/SOIL ORGANIC
MATTER 332 PHYSICAL ANALYSIS 0/SOIL ORGANIC MATTER FRACTIONS 333
STRUCTURE 0/SOIL ORGANIC MATTER 335 QUANTITY AND DISTRIBUTION OF ORGANIC
MATTER IN SOILS 335 ROLE OF METHANE IN THE C CYCLE 336 FUTURE
CONSIDERATIONS 337 REFERENCES AND SUGGESTED READING 337 CONTENTS 13
NITROGEN TRANSFORMATIONS G. P. ROBERTSON AND P. M. GROFFMAN INTRODUCTION
341 NITROGEN MINERA1IZATION AND IMMOBILIZATION 343 NITRIFICATION 347 THE
BIOCHEMISTRY OFAUTOTROPHIE NITRIFICATION 347 THE DIVERSITY OFAUTOTROPHIE
NITRIFIERS 349 HETEROTROPHIE NITRIFICATION 352 ENVIRONMENTAL CONTROLS
OFNITRIFICATION 353 INHIBITION OF NITRIFICATION 355 DENITRIFICATION 355
DENITRIFIER DIVERSITY 356 ENVIRONMENTAL CONTROLS OFDENITRIFICATION 358
OTHER NITROGEN TRANSFORMATIONS IN SOIL 359 NITROGEN MOVEMENT IN THE
LANDSCAPE 360 REFERENCES AND SUGGESTED READING 362 14 BIOLOGICAL N
INPUTS P. J. BOTTOMLEY AND D. D. MYROLD XIII GLOBAL N INPUTS 365
BIOLOGICAL NITROGEN FIXATION 367 FREE-LIVING NTFIXING BACTERIA 372
ASSOCIATIVE NTFIXING BACTERIA 373 PHOTOTROPHIC BACTERIA 374 SYMBIOTIC N
2-FIXING ASSOCIATIONS BETWEEN LEGURNES AND RHIZOBIA 375 FORMATION OFTHE
SYMBIOSIS 375 RHIZOBIAL NODULATION GENES 378 PLANT NODULATION GENES 380
DEVELOPMENT OFBNF AND NITROGEN ASSIMILATORY PROCESSES IN NODULES 381
SYMBIOTIC ASSOCIATIONS BETWEEN ACTINORHIZAL PLANTS AND FRANKIA 383
BIOTECHNOLOGY OF BNF 385 ACKNOWLEDGMENTS 386 REFERENCES AND SUGGESTED
READING 386 XIV CONTENTS 15 SOLL BIOGEOCHEMICAL CVCLING OF INORGANIC
NUTRIENTS AND METALS A. F. PLANTE INTRODUCTION 389 PHOSPHORUS 391 THE
SOIL PHOSPHORUS CYCLE 391 NATURE AND FORMS OFPHOSPHORUS IN SOU 393
BIOLOGICAL IMPORTANCE OFPHOSPHORUS 397 MICROBIAL TRANSFORMATIONS
OFPHOSPHORUS 398 SULFUR 400 THE SOIL SULFUR CYCLE 400 NATURE AND FORMS
OFSULFUR IN SOU 402 BIOLOGICAL IMPORTANCE OFSULFUR 406 MICROBIAL
TRANSFORMATIONS OFSULFUR 406 MICRONUTRIENTS AND TRACE METALS 413
MICRONUTRIENT AND TRACE METAL CYCLING IN SOIL 413 NATURE AND FORMS IN
SOU 414 . BIOLOGICALIMPORTANCE 415 MICROBIAL TRANSFONNATIONS 417
ENVIRONMENTAL SIGNIFICANCE OF P, S, AND METAL BIOGEOCHEMISTRY 423
EUTROPHICATION 423 ACID SULFATE SOILS 423 ACID MINE DRAINAGE 424 HEAVY
METAL MINING USING MICROBES 426 MICROBIAL CORROSION OFBURIED IRON AND
CONCRETE PIPES 427 CONC1USION: MICROORGANISMS AS UNIFIERS OF ELEMENTAL
CYCLES IN SOIL 430 REFERENCES AND SUGGESTED READING 430 16 THE DYNAMICS
OF SOLL ORGANIC MATTER AND NUTRIENT CVCLING A. F. PLANTE AN D W. J.
PARTON INTRODUCTION 433 REACTION KINETICS 434 ZERO-ORDER REACTIONS 434
FIRST-ORDER REACTIONS 435 CONTENTS XV ENZYMATIC KINETICS 436 MICROBIAL
GROWTH 437 MODELING THE DYNAMICS OF DECOMPOSITION AND NUTRIENT
TRANSFORMATIONS 439 SIMPLE MODELS 441 MULTICOMPARTMENTAL MODELS 443
ALTERNATIVE SOM MODELS 453 MODELS 0/ NON-C NUTRIENT ELEMENTS 454
ECOSYSTEM MODELS: LNTERACTIONS 0/ NUTRIENT CYCLING AND SOM DYNAMICS 457
ESTABLISHING POOL SIZES AND KINETIC CONSTANTS 459 MODEL SELECTION AND
EVALUATION 461 REFERENCES AND SUGGESTED READING 464 PART V SOLL
ORGANISMS: MAN AND NATURE 17 MANAGEMENT OF ORGANISMS AND THEIR PROCESSES
IN SOLLS J. L. SMITH AND H. P. COLLINS INTRODUCTION 471 CHANGING SOIL
ORGANISM POPULATIONS AND PROCESSES 473 TILLAGE AND EROSION 474 RANGELAND
AND FORESTHEALTH 477 ALTERNATIVE AGRICULTURAL MANAGEMENT 480 ORGANIC
AGRICULTURE 480 BIODYNAMIC AGRICULTURE 482 COMPOSTING 483 CROP ROTATIONS
AND GREEN MANURES 486 THE POTENTIAL FOR MANAGING MICROORGANISMS AND
THEIR PROCESSES 487 MANAGEMENT OFNATIVE AND INTRODUCED MICROORGANISMS
487 MANAGING MICROBIAL POPULATIONS AS AGENTS 0/BIOLOGICAL CONTROL 488
CONTROL OFINSECTS 490 WEED CONTROL 492 USE OFSYNTHETIC AND NATURAL
COMPOUNDS TO MODIFY SOU COMMUNITIES OR FUNCTIONS 493 MANIPULATING
SOUPOPULATIONSFOR BIOREMEDIATION 0/XENOBIOTICS 495 XVI CONTENTS
CONCLUDING COMIL1ENTS ON MICROBIAL ECOLOGY 499 REFERENCES UND SUGGESTED
READING 500 18 SOLL MICROBIOLOGY, ECOLOGY, AND BIOCHEMISTRY FOR THE 21
ST CENTURY .J. SCHIMEL INTRODUCTION 503 SAH COMMUNITY ECOLAGY-CONTROLS
OVER POPULATION AND COMMUNITY DYNAMICS 506 MICROBIAL LIRE AT THE
MICROBIAL SCALE-THE MICROBIAL LANDSCAPE 507 AWHOLEPROFILE PERSPECTIVE
509 SCALING TO THE ECOSYSTEM 510 APPLICATION 511 CONCLUSIONS 512
REFERENCES 512 INDEX 515
|
| adam_txt |
CONT NTS UNIVERSITAET FUER BOP~RKLJLTUR WIEN INSTITUT FUER
~,ODERRFO~"SCHUNG , PETER-JORD~N.::STR. 82, )\-1190 WIEN INV.NA~: G""'13
3~ /" T CONTR I B UTORS XVII PREFACE XIX PART I BACKGROUND 1 SOLL
MICROBIOLOGY, ECOLOGY AND BIOCHEMISTRY IN PERSPECTIVE E. AE. PAUL GENERAL
HISTORY AND SCOPE 3 SOIL MICROBIOLOGY 5 SOIL ECOLOGY 10 SOIL
BIOCHEMISTRY 13 IN PERSPECTIVE 19 REFERENCES AND SUGGESTED READING 21 V
VI 2 THE SOLL HABITAT R. P. VORONEY CONTENTS INTRODUCTION 25 SOIL
GENESIS AND FORMATION OF THE SOIL HABITAT 26 SOUPROFILE 29
PHYSICALASPECTS OF SOIL 29 SOUTEXTURE 30 SOUSTRUCTURE 32 SOIL HABITAT
SCALE AND OBSERVATION 33 SCALE OFSOU HABITAT 33 PORE SPACE 35 SOIL
SOLUTION CHEMISTRY 39 SOUPH 43 SOUTEMPERATURE 43 SOUWATER CONTENT 45
ENVIRONMENTAL FACTORS, TEMPERATURE AND MOISTURE INTERACTIONS 48
REFERENCES AND SUGGESTED READING 49 PART I I SOLL BIOTA 3 PHYSIOLOGICAL
AND BIOCHEMICAL METHODS FOR STUDYING SOLL BIOTA AND THEIR FUNCTION E.
KANDELER INTRODUCTION 53 SCALE OF INVESTIGATIONS AND COLLECTION OF
SAMPLES 54 STORAGE AND PRETREATMENT OF SAMPIES 56 MICROBIALBIOMASS 57
CHLOROFORM FUMIGATION INCUBATION AND EXTRACTION METHODS 57
SUBSTRATE-INDUCED RESPIRATION 58 ISOTOPIC COMPOSITION OFMICROBIAL
BIOMASS 58 SIGNATUREMOLEEULES AS A MEASURE OF MICROBIAL BIOMASS AND
MICROBIAL COMMUNITY STRUCTURE 59 CONTENTS ATP AS A MEASURE OFACTIVE
MICROBIAL BIOMASS 59 MICROBIAL MEMBRANE COMPONENTS AND FATTYACIDS 60
RESPIRATORY QUINONES AS A MEASURE OFSTRUCTURAL DIVERSITY 62 ERGOSTEROL
AS A MEASURE OFFUNGAL BIOMASS 63 LIPOPOLYSACCHARIDES, GLYCOPROTEINS, AND
CELL WALLS 64 GROWTH RATES FROM SIGNATUREMOLECULES 65 PHYSIOLOGICAL
ANALYSES 65 CULTURE-BASED STUDIES 65 ISOLATION AND CHARACTERIZATION
OFSPECIFZC ORGANISMS 66 SOUORGANIC MATTER DECOMPOSITION AND RESPIRATION
67 NITROGEN MINERALIZATION 72 ACTIVITIES AND LOCATIONS OF ENZYMES 72
SPECTROPHOTOMETRIC METHODS 73 FLUORESCENCE METHODS 75 TECHNIQUESFOR
IMAGING THE LOCATION OFENZYMES 77 FUNCTIONAL DIVERSITY 77 REFERENCES AND
SUGGESTED READING 80 4 MOLECULAR METHODS FOR STUDYING SOLL ECOLOGY J. E.
THIES INTRODUCTION 85 TYPES AND STRUCTURES OF NUCLEIC ACIDS 86 USE OF
NUCLEIC ACID ANALYSES FOR SOIL ECOLOGY STUDIES 88 DIRECT MOLECULAR
ANALYSIS OF SOHBIOTA 90 NUCLEIC ACID HYBRIDIZATION 90 CONFOCAL
MICROSCOPY 91 BIOSENSORS AND MARKER GENE TECHNOLOGIES 92 EXTRACTION OF
NUCLEIC ACIDS (DNAIRNA) 93 CHOOSING BETWEEN DNA AND RNA FOR SOH ECOLOGY
STUDIES 96 ANALYSIS OF NUCLEIC ACID EXTRACTS 96 DNA:DNA REASSOCIATION
KINETICS 96 MICROARRAYS 98 RESTRIETION FRAGMENTLENGTH POLYMORPHISM
(RFLP)ANALYSIS 100 CLONING 101 DNA SEQUENCING 102 STABLE ISOTOPE PROBING
102 PARTIAL COMMUNITY ANALYSES-PCR-BASED ASSAYS 104 ELECTROPHORESIS
OFNUCLEICACIDS 107 VII VII I CONTENTS PCR FINGERPRINTING 107 SIMILARITY
ANALYSES 112 LEVEL OF RESOLUTION 112 OTHER FACTORS THAT MAY AFFECT
MOLECULAR ANALYSES 113 SAMPLE HANDLING 113 SOIL CHEMICAL FACTORS 113
SAMPLING SCALE 114 SUMMARY 114 REFERENCES 115 5 THE PROKARYOTES K.
KILLHAM AND J. I. PROSSER INTRODUCTION 119 PHYLOGENY 120 CULTIVATED
ORGANISMS 120 UNCUUIVATED ORGANISMS 121 PHYLOGENY AND FUNCTION 125
GENERAL FEATURES OF PROKARYOTES 126 CELL STRUCTURE 127 UNICELLULAR
GROWTH FORMS 127 FILAMENTOUSAND MYCELIAL GROWTH 129 CELL WALLS 129
INTERNAL STRUCTURE 131 MOTILITY 132 METABOLISM AND PHYSIOLOGY 132 CARBON
AND ENERGY SOURCES 132 OXYGENREQUIREMENTS 133 SUBSTRATE UTILIZATION 134
AUTOCHTHONYAND ZYMOGENY 136 OLIGOTROPHY, COPIOTROPHY, AND THE R-K
CONTINUUM 137 FACULTATIVENESS 138 BIODEGRADATION CAPACITY 138 CELLULOSE
138 POLLUTANTS 139 DIFFERENTIATION, SECONDARY METABOLISM, AND ANTIBIOTIC
PRODUCTION 141 CONCLUSIONS 142 REFERENCES AND GENERAL READING 143 FAUNA:
THE ENGINE FOR MICROSIAL ACTIVITY AND TRANSPORT INTRODUCTION 145
CLASSIFICATION, CHARACTERISTICS, AND ECOLOGICAL ROLES IN SOIL 151
FUNGUS-LIKE PROTISTS 151 FUNGI (CHYTRIDIOMYCOTA, GLOMEROMYCOTA,
ZYGOMYCOTA, ASCOMYCOTA, AND BASIDIOMYCOTA) 153 EUKARYOTIC ALGAE 156
REFERENCES AND SUGGESTED READING 158 CONTENTS 6 FUNGI AND EUKARYOTIC
ALGAE R. G. THORN AND M. D. J. LYNCH 7 D. C. COLEMAN AND D. H. WALL
INTRODUCTION 163 THE MICROFAUNA 166 METHODS FOR EXTRACTING AND COUNTING
PROTOZOA 168 IMPACTS OFPROTOZOA ON ECOSYSTEM FUNCTION 168 DISTRIBUTION
OF PROTOZOA IN SOU PROFILES 169 ROTIFERA 169 NEMATODA 170 NEMATODE
FEEDING HABITS 170 ZONES OFNEMATODE ACTIVITY IN SOU 173 NEMATODE
EXTRACTION TECHNIQUES 174 MICROARTHROPODS 174 ENCHYTRAEIDS 175
MACROFAUNA 178 MACROARTHROPODS 178 IMPORTANCE OF THE MACROARTHROPODS 179
OLIGOCHAETA (EARTHWORMS) 179 FORMICIDAE (ANTS) 183 TERMITIDAE (TERMITES)
183 SUMMARY 185 REFERENCES 186 IX X PART 11I CONCEPTS AND INTERACTIONS 8
THE ECOLOGY OF SOLL ORGANLSMS S. J. MORRIS AND C. B. BLACKWOOD
INTRODUETION 195 MEEHANISMS THAT DRIVE COMMUNITY STRUCTURE 197
PHYSIOLOGICALLIMITS 198 INTRASPEEIFIE COMPETITION 199 DISPERSAL IN SPAEE
AND TIME 203 PREDICTING POPULATION GROWTH 204 INTERSPECIFIC COMPETITION
204 DIRECTEFFECTS 01 EXPLOITATION 207 INDIRECTEFFEETS 0/ EXPLOITATION
209 MUTUALISMS 211 ABIOTIC FAETORS 211 CHANGESIN COMMUNITYSTRUCTURE
THROUGH TIME AND SPACE 212 HISTORICAL AND GEOGRAPHIE CONTINGENCY 214
HIERARCHICALCOMMUNITYASSEMBLY RULES 215 EEOSYSTEM DYNAMIES 218
ENERGYFLOW 219 CARBON, NUTRIENT, AND WATER CYCLES 221 EMERGENTPROPERTIES
224 CONC1USION 225 REFERENCES AND SUGGESTED READING 226 9 THE PHYSIOLOGY
AND BIOCHEMISTRY OF SOLL ORGANLSMS W. B. MCGJLL INTRODUETION 231
METABOLIE CLASSIFICATIONS OF SOIL ORGANISMS 233 ELECTRONS AND ATP 234
SUBSTRATE-LEVEL PHOSPHORYLATION 234 CONTENTS CONTENTS XI ELECTRON
TRANSPORT PHOSPHORYLATION 235 OVERVIEW 01 MECHANISMS TO GENERATE ATP AND
REDUCING EQUIVALENTS 238 EXAMPLES OF SOIL MICROBIAL TRANSFORMATIONS 241
NITROGEN FIXATION 241 AEROBIC CHEMOLITHOTROPHIC EXAMPLES 242 OXIDATION
01 REDUCED C 245 HOW CAN THE MICROBIAL CONTRIBUTIONS BE VIEWED IN A
SIMPLIFIED AND UNIFIED CONCEPT? 251 A MODEL OFINTERCONNECTED CYCLES 01
ELECTRONS 252 THE ANOXYGENIC CYCLE 253 THE OXYGENIC CYCLE 253 REFERENCES
256 10 THE ECOLOGY OF PLANT-MICROBIAL MUTUALISMS J. POWELL AND J.
KLIRONOMOS INTRODUCTION 257 ROOTS AS AN INTERFACE FOR PLANT-MICROBIAL
MUTUALISMS 258 MYCORRHIZAL SYMBIOSES 259 SYMBIOSES INVOLVING N-FIXING
ORGANISMS 267 INTERACTIONS AMONG MUTUALISTS 270 INTERACTIONS WITH
PATHOGENS 272 IMPLICATIONS FOR PLANT POPULATIONS AND COMMUNITIES 275
CHALLENGES IN THE STUDY OF INTERACTIONS 276 CONCLUSIONS 277 REFERENCES
AND SUGGESTED READING 279 1 1 SPATIAL DISTRIBUTION OF SOLL ORGANISMS S.
D. FREY INTRODUCTION 283 GEOGRAPHICAL DIFFERENCES IN SOIL BIOTA 285
ASSOCIATION OF SOIL ORGANISMS WITH PLANTS 287 SPATIAL HETEROGENEITY OF
SOIL ORGANISMS 290 XII CONTENTS VERTICAL DISTRIBUTION WITHIN THE
SOHPROFILE 292 MICROSEALE HETEROGENEITY IN MICROBIAL POPULATIONS 296
REFERENCES AND SUGGESTED READING 299 PART IV BIOCHEMISTRY AND
BIOGEOCHEMISTRY 12 CARBON CYCLING AND FORMATION OF SOLL ORGANIC MATTER
W. HORWATH INTRODUCTION 303 LONG-TERM CARBON CYCLE 304 THE SHORT-TERM C
CYCLE 307 ECOSYSTEM C CYCLING 309 COMPOSITION AND TUMOVER OF C INPUTS TO
SOH 312 PLANT AND MICROBIAL LIPIDS 315 STARCH 315 HEMICELLULOSES,
PECTINS, AND CELLULOSE 317 LIGNIN 320 OTHER PLANT CELL WALL
CARBOHYDRATES AND PROTEINS 324 PLANT SECONDARY COMPOUNDS 325 ROOTS AND
ROOT EXUDATES 325 CELL WALLS 0/MICROORGANISMS 327 SOH ORGANIC MATTER 329
SOIL ORGANIC MATTER FORMATION 329 CLASSICAL FRACTIONS 0/SOIL ORGANIC
MATTER 332 PHYSICAL ANALYSIS 0/SOIL ORGANIC MATTER FRACTIONS 333
STRUCTURE 0/SOIL ORGANIC MATTER 335 QUANTITY AND DISTRIBUTION OF ORGANIC
MATTER IN SOILS 335 ROLE OF METHANE IN THE C CYCLE 336 FUTURE
CONSIDERATIONS 337 REFERENCES AND SUGGESTED READING 337 CONTENTS 13
NITROGEN TRANSFORMATIONS G. P. ROBERTSON AND P. M. GROFFMAN INTRODUCTION
341 NITROGEN MINERA1IZATION AND IMMOBILIZATION 343 NITRIFICATION 347 THE
BIOCHEMISTRY OFAUTOTROPHIE NITRIFICATION 347 THE DIVERSITY OFAUTOTROPHIE
NITRIFIERS 349 HETEROTROPHIE NITRIFICATION 352 ENVIRONMENTAL CONTROLS
OFNITRIFICATION 353 INHIBITION OF NITRIFICATION 355 DENITRIFICATION 355
DENITRIFIER DIVERSITY 356 ENVIRONMENTAL CONTROLS OFDENITRIFICATION 358
OTHER NITROGEN TRANSFORMATIONS IN SOIL 359 NITROGEN MOVEMENT IN THE
LANDSCAPE 360 REFERENCES AND SUGGESTED READING 362 14 BIOLOGICAL N
INPUTS P. J. BOTTOMLEY AND D. D. MYROLD XIII GLOBAL N INPUTS 365
BIOLOGICAL NITROGEN FIXATION 367 FREE-LIVING NTFIXING BACTERIA 372
ASSOCIATIVE NTFIXING BACTERIA 373 PHOTOTROPHIC BACTERIA 374 SYMBIOTIC N
2-FIXING ASSOCIATIONS BETWEEN LEGURNES AND RHIZOBIA 375 FORMATION OFTHE
SYMBIOSIS 375 RHIZOBIAL NODULATION GENES 378 PLANT NODULATION GENES 380
DEVELOPMENT OFBNF AND NITROGEN ASSIMILATORY PROCESSES IN NODULES 381
SYMBIOTIC ASSOCIATIONS BETWEEN ACTINORHIZAL PLANTS AND FRANKIA 383
BIOTECHNOLOGY OF BNF 385 ACKNOWLEDGMENTS 386 REFERENCES AND SUGGESTED
READING 386 XIV CONTENTS 15 SOLL BIOGEOCHEMICAL CVCLING OF INORGANIC
NUTRIENTS AND METALS A. F. PLANTE INTRODUCTION 389 PHOSPHORUS 391 THE
SOIL PHOSPHORUS CYCLE 391 NATURE AND FORMS OFPHOSPHORUS IN SOU 393
BIOLOGICAL IMPORTANCE OFPHOSPHORUS 397 MICROBIAL TRANSFORMATIONS
OFPHOSPHORUS 398 SULFUR 400 THE SOIL SULFUR CYCLE 400 NATURE AND FORMS
OFSULFUR IN SOU 402 BIOLOGICAL IMPORTANCE OFSULFUR 406 MICROBIAL
TRANSFORMATIONS OFSULFUR 406 MICRONUTRIENTS AND TRACE METALS 413
MICRONUTRIENT AND TRACE METAL CYCLING IN SOIL 413 NATURE AND FORMS IN
SOU 414 . BIOLOGICALIMPORTANCE 415 MICROBIAL TRANSFONNATIONS 417
ENVIRONMENTAL SIGNIFICANCE OF P, S, AND METAL BIOGEOCHEMISTRY 423
EUTROPHICATION 423 ACID SULFATE SOILS 423 ACID MINE DRAINAGE 424 HEAVY
METAL MINING USING MICROBES 426 MICROBIAL CORROSION OFBURIED IRON AND
CONCRETE PIPES 427 CONC1USION: MICROORGANISMS AS UNIFIERS OF ELEMENTAL
CYCLES IN SOIL 430 REFERENCES AND SUGGESTED READING 430 16 THE DYNAMICS
OF SOLL ORGANIC MATTER AND NUTRIENT CVCLING A. F. PLANTE AN D W. J.
PARTON INTRODUCTION 433 REACTION KINETICS 434 ZERO-ORDER REACTIONS 434
FIRST-ORDER REACTIONS 435 CONTENTS XV ENZYMATIC KINETICS 436 MICROBIAL
GROWTH 437 MODELING THE DYNAMICS OF DECOMPOSITION AND NUTRIENT
TRANSFORMATIONS 439 SIMPLE MODELS 441 MULTICOMPARTMENTAL MODELS 443
ALTERNATIVE SOM MODELS 453 MODELS 0/ NON-C NUTRIENT ELEMENTS 454
ECOSYSTEM MODELS: LNTERACTIONS 0/ NUTRIENT CYCLING AND SOM DYNAMICS 457
ESTABLISHING POOL SIZES AND KINETIC CONSTANTS 459 MODEL SELECTION AND
EVALUATION 461 REFERENCES AND SUGGESTED READING 464 PART V SOLL
ORGANISMS: MAN AND NATURE 17 MANAGEMENT OF ORGANISMS AND THEIR PROCESSES
IN SOLLS J. L. SMITH AND H. P. COLLINS INTRODUCTION 471 CHANGING SOIL
ORGANISM POPULATIONS AND PROCESSES 473 TILLAGE AND EROSION 474 RANGELAND
AND FORESTHEALTH 477 ALTERNATIVE AGRICULTURAL MANAGEMENT 480 ORGANIC
AGRICULTURE 480 BIODYNAMIC AGRICULTURE 482 COMPOSTING 483 CROP ROTATIONS
AND GREEN MANURES 486 THE POTENTIAL FOR MANAGING MICROORGANISMS AND
THEIR PROCESSES 487 MANAGEMENT OFNATIVE AND INTRODUCED MICROORGANISMS
487 MANAGING MICROBIAL POPULATIONS AS AGENTS 0/BIOLOGICAL CONTROL 488
CONTROL OFINSECTS 490 WEED CONTROL 492 USE OFSYNTHETIC AND NATURAL
COMPOUNDS TO MODIFY SOU COMMUNITIES OR FUNCTIONS 493 MANIPULATING
SOUPOPULATIONSFOR BIOREMEDIATION 0/XENOBIOTICS 495 XVI CONTENTS
CONCLUDING COMIL1ENTS ON MICROBIAL ECOLOGY 499 REFERENCES UND SUGGESTED
READING 500 18 SOLL MICROBIOLOGY, ECOLOGY, AND BIOCHEMISTRY FOR THE 21
ST CENTURY .J. SCHIMEL INTRODUCTION 503 SAH COMMUNITY ECOLAGY-CONTROLS
OVER POPULATION AND COMMUNITY DYNAMICS 506 MICROBIAL LIRE AT THE
MICROBIAL SCALE-THE MICROBIAL LANDSCAPE 507 AWHOLEPROFILE PERSPECTIVE
509 SCALING TO THE ECOSYSTEM 510 APPLICATION 511 CONCLUSIONS 512
REFERENCES 512 INDEX 515 |
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| any_adam_object_boolean | 1 |
| author_GND | (DE-588)133548643 |
| building | Verbundindex |
| bvnumber | BV021787578 |
| callnumber-first | Q - Science |
| callnumber-label | QR111 |
| callnumber-raw | QR111 |
| callnumber-search | QR111 |
| callnumber-sort | QR 3111 |
| callnumber-subject | QR - Microbiology |
| classification_rvk | RB 10160 WF 2100 WI 5020 ZC 14000 |
| classification_tum | LAN 117f BIO 142f |
| ctrlnum | (OCoLC)74941972 (DE-599)BVBBV021787578 |
| dewey-full | 579/.1757 |
| dewey-hundreds | 500 - Natural sciences and mathematics |
| dewey-ones | 579 - Microorganisms, fungi & algae |
| dewey-raw | 579/.1757 |
| dewey-search | 579/.1757 |
| dewey-sort | 3579 41757 |
| dewey-tens | 570 - Biology |
| discipline | Biologie Agrarwissenschaft Agrar-/Forst-/Ernährungs-/Haushaltswissenschaft / Gartenbau Pflanzenbau Geographie |
| discipline_str_mv | Biologie Agrarwissenschaft Agrar-/Forst-/Ernährungs-/Haushaltswissenschaft / Gartenbau Pflanzenbau Geographie |
| edition | 3. ed. |
| format | Book |
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| genre | (DE-588)4143413-4 Aufsatzsammlung gnd-content |
| genre_facet | Aufsatzsammlung |
| id | DE-604.BV021787578 |
| illustrated | Illustrated |
| index_date | 2024-07-02T15:43:25Z |
| indexdate | 2024-07-09T20:44:35Z |
| institution | BVB |
| isbn | 9780125468077 0125468075 |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-015000272 |
| oclc_num | 74941972 |
| open_access_boolean | |
| owner | DE-703 DE-M49 DE-BY-TUM DE-634 DE-83 DE-11 DE-188 |
| owner_facet | DE-703 DE-M49 DE-BY-TUM DE-634 DE-83 DE-11 DE-188 |
| physical | XX, 532 S. Ill., graph. Darst. |
| publishDate | 2007 |
| publishDateSearch | 2007 |
| publishDateSort | 2007 |
| publisher | Acad. Press |
| record_format | marc |
| spelling | Soil microbiology, ecology, and biochemistry ed. Eldor A. Paul 3. ed. Amsterdam [u.a.] Acad. Press 2007 XX, 532 S. Ill., graph. Darst. txt rdacontent n rdamedia nc rdacarrier Bodembiologie gtt Bodemchemie gtt Sols - Biochimie Sols - Microbiologie Soil biochemistry Soil microbiology Boden (DE-588)4007348-8 gnd rswk-swf Ökologie (DE-588)4043207-5 gnd rswk-swf Bodenchemie (DE-588)4146134-4 gnd rswk-swf Biochemie (DE-588)4006777-4 gnd rswk-swf Mikrobiologie (DE-588)4316357-9 gnd rswk-swf Bodenmikrobiologie (DE-588)4659394-9 gnd rswk-swf Bodenökologie (DE-588)4332816-7 gnd rswk-swf (DE-588)4143413-4 Aufsatzsammlung gnd-content Bodenmikrobiologie (DE-588)4659394-9 s DE-604 Bodenökologie (DE-588)4332816-7 s Bodenchemie (DE-588)4146134-4 s Biochemie (DE-588)4006777-4 s Boden (DE-588)4007348-8 s Mikrobiologie (DE-588)4316357-9 s DE-188 Ökologie (DE-588)4043207-5 s Paul, Eldor Alvin 1931- Sonstige (DE-588)133548643 oth Bis 2. Auflage Paul, Eldor A. Soil microbiology and biochemistry OEBV Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=015000272&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Soil microbiology, ecology, and biochemistry Bodembiologie gtt Bodemchemie gtt Sols - Biochimie Sols - Microbiologie Soil biochemistry Soil microbiology Boden (DE-588)4007348-8 gnd Ökologie (DE-588)4043207-5 gnd Bodenchemie (DE-588)4146134-4 gnd Biochemie (DE-588)4006777-4 gnd Mikrobiologie (DE-588)4316357-9 gnd Bodenmikrobiologie (DE-588)4659394-9 gnd Bodenökologie (DE-588)4332816-7 gnd |
| subject_GND | (DE-588)4007348-8 (DE-588)4043207-5 (DE-588)4146134-4 (DE-588)4006777-4 (DE-588)4316357-9 (DE-588)4659394-9 (DE-588)4332816-7 (DE-588)4143413-4 |
| title | Soil microbiology, ecology, and biochemistry |
| title_auth | Soil microbiology, ecology, and biochemistry |
| title_exact_search | Soil microbiology, ecology, and biochemistry |
| title_exact_search_txtP | Soil microbiology, ecology, and biochemistry |
| title_full | Soil microbiology, ecology, and biochemistry ed. Eldor A. Paul |
| title_fullStr | Soil microbiology, ecology, and biochemistry ed. Eldor A. Paul |
| title_full_unstemmed | Soil microbiology, ecology, and biochemistry ed. Eldor A. Paul |
| title_old | Paul, Eldor A. Soil microbiology and biochemistry |
| title_short | Soil microbiology, ecology, and biochemistry |
| title_sort | soil microbiology ecology and biochemistry |
| topic | Bodembiologie gtt Bodemchemie gtt Sols - Biochimie Sols - Microbiologie Soil biochemistry Soil microbiology Boden (DE-588)4007348-8 gnd Ökologie (DE-588)4043207-5 gnd Bodenchemie (DE-588)4146134-4 gnd Biochemie (DE-588)4006777-4 gnd Mikrobiologie (DE-588)4316357-9 gnd Bodenmikrobiologie (DE-588)4659394-9 gnd Bodenökologie (DE-588)4332816-7 gnd |
| topic_facet | Bodembiologie Bodemchemie Sols - Biochimie Sols - Microbiologie Soil biochemistry Soil microbiology Boden Ökologie Bodenchemie Biochemie Mikrobiologie Bodenmikrobiologie Bodenökologie Aufsatzsammlung |
| url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=015000272&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
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