Molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in Ethiopia:
Saved in:
| Main Author: | |
|---|---|
| Format: | Thesis Book |
| Language: | English |
| Published: |
Berlin
Mensch & Buch Verl.
2003
|
| Subjects: | |
| Online Access: | Inhaltsverzeichnis |
| Physical Description: | IX, 139 S. graph. Darst. |
| ISBN: | 3898205126 |
Staff View
MARC
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| 100 | 1 | |a Mengistie, Ademe Zerihun |d 1962- |e Verfasser |0 (DE-588)128477059 |4 aut | |
| 245 | 1 | 0 | |a Molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in Ethiopia |c vorgelegt von Ademe Zerihun Mengistie |
| 264 | 1 | |a Berlin |b Mensch & Buch Verl. |c 2003 | |
| 300 | |a IX, 139 S. |b graph. Darst. | ||
| 336 | |b txt |2 rdacontent | ||
| 337 | |b n |2 rdamedia | ||
| 338 | |b nc |2 rdacarrier | ||
| 502 | |a Berlin, Freie Univ. Diss., 2003 | ||
| 650 | 7 | |a Streptococcus |2 cabt | |
| 650 | 7 | |a Ethiopia |2 cabt | |
| 650 | 7 | |a mastitis |2 cabt | |
| 650 | 7 | |a bovine mastitis |2 cabt | |
| 650 | 7 | |a Streptococcus agalactiae |2 cabt | |
| 650 | 7 | |a Staphylococcus |2 cabt | |
| 650 | 7 | |a Staphylococcus aureus |2 cabt | |
| 650 | 7 | |a epidemiology |2 cabt | |
| 650 | 0 | 7 | |a Euterentzündung |0 (DE-588)4153233-8 |2 gnd |9 rswk-swf |
| 650 | 0 | 7 | |a Rind |0 (DE-588)4050061-5 |2 gnd |9 rswk-swf |
| 650 | 0 | 7 | |a Epidemiologie |0 (DE-588)4015016-1 |2 gnd |9 rswk-swf |
| 650 | 0 | 7 | |a Staphylococcus aureus |0 (DE-588)4182912-8 |2 gnd |9 rswk-swf |
| 650 | 0 | 7 | |a Streptococcus agalactiae |0 (DE-588)4340809-6 |2 gnd |9 rswk-swf |
| 651 | 7 | |a Äthiopien |0 (DE-588)4000639-6 |2 gnd |9 rswk-swf | |
| 655 | 7 | |0 (DE-588)4113937-9 |a Hochschulschrift |2 gnd-content | |
| 689 | 0 | 0 | |a Äthiopien |0 (DE-588)4000639-6 |D g |
| 689 | 0 | 1 | |a Rind |0 (DE-588)4050061-5 |D s |
| 689 | 0 | 2 | |a Euterentzündung |0 (DE-588)4153233-8 |D s |
| 689 | 0 | 3 | |a Streptococcus agalactiae |0 (DE-588)4340809-6 |D s |
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| 689 | 1 | 2 | |a Euterentzündung |0 (DE-588)4153233-8 |D s |
| 689 | 1 | 3 | |a Staphylococcus aureus |0 (DE-588)4182912-8 |D s |
| 689 | 1 | 4 | |a Epidemiologie |0 (DE-588)4015016-1 |D s |
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Record in the Search Index
| _version_ | 1808044664589123584 |
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| adam_text |
CONTENTS
LIST
OF
TABLES
.
VII
LIST
OF
FIGURES
.
VFFI
ABBREVIATIONS
.
IX
1
INTRODUCTION
AND
OBJECTIVES
.
1
2
LITERATURE
REVIEW
.
4
2.1
MICROBIAL
AGENTS
OF
BOVINE
MASTITIS
.
4
2.1.1
CLASSIFICATION
OF
MICROBIAL
AGENTS
OF
MASTITIS
.
4
2.1.2
CONTAGIOUS
PATHOGENS
OF
MASTITIS
.
4
2.1.2.1
STAPHYLOCOCCUS
AUREUS
.
5
2.1.2.2
STREPTOCOCCUS
AGALACTIAE
.
6
2.1.2.3
MYCOPLASMA
SPECIES
.
7
2.1.2.4
STREPTOCOCOCCUS
DYSGALACTIAE
.
8
2.1.2.5
OTHER
CONTAGIOUS
MASTITIS
PATHOGENS
.
8
2.1.3
ENVIRONMENTAL
MASTITIS
PATHOGENS
.
9
2.1.3.1
COLIFORMS
.
10
2.1.3.2
STREPTOCOCCUS
UBERIS
.
10
2.1.3.3
OTHER
ENVIRONMENTAL
PATHOGENS
.
11
2.2
EPIDEMIOLOGY
OF
STAPHYLOCOCCUS
AUREUS
AND
STREPTOCOCCUS
AGALACTIAE
UDDER
INFECTIONS
.
11
2.3
PATHOGENICITY
OF
STAPHYLOCOCCUS
AUREUS
AND
STREPTOCOCCUS
AGALACTIAE
UDDER
INFECTIONS
.
12
2.4
DIAGNOSIS
OF
STAPHYLOCOCCUS
AUREUS
AND
STREPTOCOCCUS
AGALACTIAE
UDDER
INFECTIONS
.
14
2.5
TYPING
OF
STAPHYLOCOCCUS
AUREUS
AND
STREPTOCOCCUS
AGALACTIAE
-----------------
15
2.5.1
PHENOTYPIC
CHARACTERISATION.
.
16
2.5.1.1
BIOTYPING
.
16
2.5.1.2
ANTIBIOTIC
SUSCEPTIBILITY.
.
17
2.5.1.3
PHAGE
TYPING
.
17
2.5.1.4
SEROTYPING
.
18
2.5.1.5
POLYACRYLAMIDE
GEL
ELECTROPHORESIS/
IMMUNOBLOTTING
.
19
2.5.1.6
MULTILOCUS
ENZYME
ELECTROPHORESIS
(MLEE)
.
20
2.5.2
MOLECULAR
TYPING
METHODS
.
21
2.5.2.1
PLASMID
TYPING
.
21
2.5.2.2
CHROMOSOMAL
DNA
RESTRICTION
PROFILES
.
22
2.5.2.3
RIBOTYPING
(RIBOSOMAL
DNA
FINGERPRINTING)
.
22
2.5.2.4
PULSED
FIELD
GEL
ELECTROPHORESIS
(PFGE)
.
23
2.5.2.5
POLYMERASE
CHAIN REACTION
(PCR)
AND
PCR-RESTRICTION
FRAGMENT
LENGTH
POLYMORPHISM.
.
25
2.5.2.6
REPETITIVE
CHROMOSOMAL
ELEMENTS
(REP)-PCR
.
26
2.S.2.7
RANDOM
AMPLIFIED
POLYMORPHISM
DNA
OR
ARBITRARY
PRIMED
(AP PCR.
27
2.5.2.8
SEQUENCING
.
28
2.6
CONTROL
OF
STAPHYLOCOCCUS AUREUS
AND
STREPTOCOCCUS
AGALACTIAE
UDDER
INFECTIONS
.
29
2.6.1
DECREASING
EXPOSURE
OF
TEAT
ENDS
TO
INFECTIOUS
AGENTS
.
29
2.6.1.1
TREATMENT
.
29
2.6.1.2
IN
VITRO
ANTIMICROBIAL
SUSCEPTIBILITY
TESTING
AND
ANTIBIOTIC
RESISTANCE
.
30
2.7
IMPLICATION
OF
STAPHYLOCOCCUS
AUREUS
AND
STREPTOCOCCUS
AGALACTIAE
UDDER
INFECTION
.
31
2.7.1
PUBLIC
HEALTH
IMPLICATIONS
.
31
2.7.2
ECONOMIC
IMPLICATIONS
.
32
3.
MATERIALS
AND
METHODS
.
33
3.1
STUDY
DESIGN.
.
33
3.1.1
BASIC
FARM
DATA
AND
QUESTIONNAIRE
.
33
3.1.2
SOURCE
OF
SAMPLES
.
34
3.1.3
SAMPLING
FRAME
.
35
3.2
SAMPLE
COLLECTION
.
35
3.2.1
CLINICAL
EXAMINATION
OF
UDDER
.
35
3.2.2
MILK
SAMPLING
AND
ON-FARM
MASTITIS
SCREENING
.
36
33
LABORATORY EXAMINATION
OF
MILK
SAMPLES.
.
37
3.3.1
MICROBIAL
EXAMINATION
.
37
3.3.1.1
MEDIA
PREPARATION
.
37
3.3.1.2
MILK
SAMPLE
PREPARATION
AND
INOCULATION
.
37
3.3.1.3
PRIMARY
MICROBIAL
IDENTIFICATION
.
38
3.3.1.4
SECONDARY
MICROBIAL
IDENTIFICATION
.
38
3.3.1.5
ASSUMPTIONS
USED
IN
THE
INTERPRETATION
OF
MICROBIAL
CULTURAL
RESULTS
.
39
3.4
PHYSICAL
AND
MOLECULAR
ANALYSIS
OF
THE
HETEROGENEITY
OF
STAPHYLOCOCCUS
AUREUS
STRAINS
.
39
3.4.1
BACTERIAL
ISOLATES
.
39
3.4.2
ANTIBIOTIC
SUSCEPTIBILITY
TESTING
.
40
3.4.3
P-LACTAMASE
PRODUCTION
TEST
.
42
3.4.4
PULSED
FIELD
GEL
ELECTROPHORESIS
.
42
3.4.4.1
PREPARATION
OF
CELLS
IN
AGAROSE
BLOCKS
.
42
3.4.4.2
LYSIS
AND
DEPROTEINIZATION
.
43
3.4.4.3
DIGESTION
WITH
MACRORESTRICTION
ENZYME
.
43
3.4.4.4
PULSED
FIELD
GEL
ELECTROPHORESIS
.
44
3.4.4.5
INTERPRETATION
BANDING
PATTERNS
.
45
3.5
PHYSICAL
AND
MOLECULAR
HETEROGENEITY
ANALYSIS
OF
STREPTOCOCCUS
AGALACTIAE
STRAINS
.
45
3.5.1
BACTERIAL
ISOLATES
.
45
3.5.2
PULSED
FIELD
GEL
ELECTROPHORESIS
.
46
3.5.2.1
PREPARATION
OF
WHOLE
GENOMIC
DNA
.
46
3.5.2.2
MACRORESTRICTION
ENZYME
DIGESTION
AND
ELECTROPHORESIS
.
47
3.5.2.3
INTERPRETATION
OF
BANDING
PATTERNS
.
47
3.6
DATA
STORAGE
AND
STATISTICAL
ANALYSES
.
47
4.
RESULTS
.
50
4.1
DESCRIPTIVE
STATISTICS
OF
STUDY
DAIRY
HERDS
.
50
4.2
PREVALENCE
OF
STAPHYLOCOCCUS
AUREUS
UDDER
INFECTION
.
52
4.2.1
PERIODIC
PREVALENCE
OF
S.
AUREUS
UDDER
INFECTION.
.
53
43
UDDER
QUARTER-LEVEL
PREVALENCE
OF
STAPHYLOCOCCUS
AUREUS
UDDER
INFECTION
55
4.3.1
PREVALENCE
AND
DISTRIBUTION
.
55
4.3.2
MANIFESTATIONS
OF
QUARTER-LEVEL
S.
AUREUS
MASTITIS
.
56
4.4
INCIDENCE
OF
STAPHYLOCOCCUS
AUREUS
MASTITIS
.
57
4.5
RISK
FACTORS
FOR
STAPHYLOCOCCUS
AUREUS
UDDER
INFECTION
.
58
4.6
PREVALENCE
OF
STREPTOCOCCUS
AGALACTIAE
UDDER
INFECTION
.
61
4.6.1
DISTRIBUTION
OF
STR.
AGALACTIAE
CASES
AMONG
HERDS
.
61
4.6.2
PERIOD
PREVALENCE
OF
STR.
AGALACTIAE
UDDER
INFECTION
.
62
4.6.3
UDDER
QUARTER-LEVEL
PREVALENCE
OF
STR.
AGALACTIAE
INFECTION
.
63
4.6.3.1
PREVALENCE
AND
DISTRIBUTION
.
63
4.6.3.2
MANIFESTATIONS
OF
STR.
AGALACTIAE
MASTITIS
.
65
4.7
INCIDENCE
OF
STREPTOCOCCUS
AGALACTIAE
UDDER
INFECTIONS
.
66
4.8
RISK
FACTORS
FOR
STREPTOCOCCUS
AGALACTIAE
MASTITIS
.
67
4.9
MOLECULAR
EPIDEMIOLOGY
AND
ANTIBIOTIC
SUSCEPTIBILITY
PROFILES
OF
STAPHYLOCOCCUS
AUREUS
ISOLATES
FROM
MASTITIC
COWS
.
69
4.9.1
RESTRICTION
FRAGMENT
LENGTH
POLYMORPHISM
USING
PFGE
.
69
4.9.2
CLINICAL
MANIFESTATIONS
AND
PERSISTENCE
OF
S.
AUREUS
UDDER
INFECTION.
.
72
4.9.3
ANTIBIOTIC
SENSITIVITY
PROFILES
AND
B-LACTAMASE
PRODUCTION
BY
S.
AUREUS
.
74
4.9.3.1
B-LACTAMASE
PRODUCTION
.
74
4.9.3.2
ANTIBIOTIC
RESISTANCE
PROFILES
AND
PERSISTENCE
OF
UDDER
INFECTION.
.
74
4.10
MOLECULAR
EPIDEMIOLOGY
OF
STREPTOCOCCUS
AGALACTIAE
ISOLATED
FROM
MASTITIC
COWS
.
80
4.10.1
RESTRICTION
FRAGMENT
LENGTH
POLYMORPHISM
USING
PFGE
.
80
4.10.2
CLINICAL
MANIFESTATIONS
AND
PERSISTENCE
OF
STR.
AGALACTIAE
STRAINS
IN
THE
BOVINE
UDDER
.
83
5.
DISCUSSION
.
85
5.1
HERD
AND
COW
CHARACTERISTICS
.
85
5.2
PREVALENCE
AND
INCIDENCE
OF
STAPHYLOCOCCUS
AUREUS
UDDER
INFECTION
IN
DAIRY
DAIRY
COWS
.
85
5.3
RISK
FACTORS
FOR
STAPHYLOCOCCUS
AUREUS
UDDER
INFECTION
.
88
5.4
GENETIC
DIVERSITY
AND
ANTIBIOTIC
SENSITIVITY
OF
STAPHYLOCOCCUS
AUREUS
.
89
5.5
PREVALENCE,
INCIDENCE
AND
RISK
FACTORS
FOR
STREPTOCOCCUS
AGALACTIAE
BOVINE
UDDER
INFECTION.
.
93
5.6
RISK
FACTORS
FOR
STREPTOCOCCUS
AGALACTIAE
UDDER
INFECTIONS
.
93
5.7
CLINICAL
MANIFESTATIONS
AND
GENETIC DIVERSITY
OF
STREPTOCOCCUS
AGALACTIAE
ISOLATED
FROM
THE BOVINE
UDDER.
.
94
6.
CONCLUSIONS
.
97
7.
REFERENCES
.
98
SUMMARY
.122
ZUSAMMENFASSUNG
.
124
APPENDIX
.126
ACKNOWLEDGMENTS
.
135
VI |
| any_adam_object | 1 |
| author | Mengistie, Ademe Zerihun 1962- |
| author_GND | (DE-588)128477059 |
| author_facet | Mengistie, Ademe Zerihun 1962- |
| author_role | aut |
| author_sort | Mengistie, Ademe Zerihun 1962- |
| author_variant | a z m az azm |
| building | Verbundindex |
| bvnumber | BV017245495 |
| classification_rvk | XX 4200 |
| ctrlnum | (OCoLC)76554958 (DE-599)BVBBV017245495 |
| discipline | Medizin |
| format | Thesis Book |
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| genre | (DE-588)4113937-9 Hochschulschrift gnd-content |
| genre_facet | Hochschulschrift |
| geographic | Äthiopien (DE-588)4000639-6 gnd |
| geographic_facet | Äthiopien |
| id | DE-604.BV017245495 |
| illustrated | Illustrated |
| indexdate | 2024-08-22T00:15:57Z |
| institution | BVB |
| isbn | 3898205126 |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-010395037 |
| oclc_num | 76554958 |
| open_access_boolean | |
| owner | DE-703 DE-188 |
| owner_facet | DE-703 DE-188 |
| physical | IX, 139 S. graph. Darst. |
| publishDate | 2003 |
| publishDateSearch | 2003 |
| publishDateSort | 2003 |
| publisher | Mensch & Buch Verl. |
| record_format | marc |
| spelling | Mengistie, Ademe Zerihun 1962- Verfasser (DE-588)128477059 aut Molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in Ethiopia vorgelegt von Ademe Zerihun Mengistie Berlin Mensch & Buch Verl. 2003 IX, 139 S. graph. Darst. txt rdacontent n rdamedia nc rdacarrier Berlin, Freie Univ. Diss., 2003 Streptococcus cabt Ethiopia cabt mastitis cabt bovine mastitis cabt Streptococcus agalactiae cabt Staphylococcus cabt Staphylococcus aureus cabt epidemiology cabt Euterentzündung (DE-588)4153233-8 gnd rswk-swf Rind (DE-588)4050061-5 gnd rswk-swf Epidemiologie (DE-588)4015016-1 gnd rswk-swf Staphylococcus aureus (DE-588)4182912-8 gnd rswk-swf Streptococcus agalactiae (DE-588)4340809-6 gnd rswk-swf Äthiopien (DE-588)4000639-6 gnd rswk-swf (DE-588)4113937-9 Hochschulschrift gnd-content Äthiopien (DE-588)4000639-6 g Rind (DE-588)4050061-5 s Euterentzündung (DE-588)4153233-8 s Streptococcus agalactiae (DE-588)4340809-6 s Epidemiologie (DE-588)4015016-1 s DE-604 Staphylococcus aureus (DE-588)4182912-8 s DNB Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=010395037&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Mengistie, Ademe Zerihun 1962- Molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in Ethiopia Streptococcus cabt Ethiopia cabt mastitis cabt bovine mastitis cabt Streptococcus agalactiae cabt Staphylococcus cabt Staphylococcus aureus cabt epidemiology cabt Euterentzündung (DE-588)4153233-8 gnd Rind (DE-588)4050061-5 gnd Epidemiologie (DE-588)4015016-1 gnd Staphylococcus aureus (DE-588)4182912-8 gnd Streptococcus agalactiae (DE-588)4340809-6 gnd |
| subject_GND | (DE-588)4153233-8 (DE-588)4050061-5 (DE-588)4015016-1 (DE-588)4182912-8 (DE-588)4340809-6 (DE-588)4000639-6 (DE-588)4113937-9 |
| title | Molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in Ethiopia |
| title_auth | Molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in Ethiopia |
| title_exact_search | Molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in Ethiopia |
| title_full | Molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in Ethiopia vorgelegt von Ademe Zerihun Mengistie |
| title_fullStr | Molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in Ethiopia vorgelegt von Ademe Zerihun Mengistie |
| title_full_unstemmed | Molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in Ethiopia vorgelegt von Ademe Zerihun Mengistie |
| title_short | Molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in Ethiopia |
| title_sort | molecular epidemiology of staphylococcus aureus and streptococcus agalactiae isolated from bovine mastitis in ethiopia |
| topic | Streptococcus cabt Ethiopia cabt mastitis cabt bovine mastitis cabt Streptococcus agalactiae cabt Staphylococcus cabt Staphylococcus aureus cabt epidemiology cabt Euterentzündung (DE-588)4153233-8 gnd Rind (DE-588)4050061-5 gnd Epidemiologie (DE-588)4015016-1 gnd Staphylococcus aureus (DE-588)4182912-8 gnd Streptococcus agalactiae (DE-588)4340809-6 gnd |
| topic_facet | Streptococcus Ethiopia mastitis bovine mastitis Streptococcus agalactiae Staphylococcus Staphylococcus aureus epidemiology Euterentzündung Rind Epidemiologie Äthiopien Hochschulschrift |
| url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=010395037&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
| work_keys_str_mv | AT mengistieademezerihun molecularepidemiologyofstaphylococcusaureusandstreptococcusagalactiaeisolatedfrombovinemastitisinethiopia |