Pattern formation in Zebrafish:
Saved in:
| Format: | Book |
|---|---|
| Language: | English |
| Published: |
Berlin [u.a.]
Springer
2002
|
| Series: | Results and problems in cell differentiation
40 |
| Subjects: | |
| Online Access: | Inhaltsverzeichnis |
| Item Description: | Literaturverz. S. 371 - 429 |
| Physical Description: | XVII, 438 S. Ill., graph. Darst. |
| ISBN: | 354043576X |
Staff View
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| 245 | 1 | 0 | |a Pattern formation in Zebrafish |c Lilianna Solnica-Krezel (ed.) |
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| 300 | |a XVII, 438 S. |b Ill., graph. Darst. | ||
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| 490 | 1 | |a Results and problems in cell differentiation |v 40 | |
| 500 | |a Literaturverz. S. 371 - 429 | ||
| 650 | 4 | |a Danio zébré - Développement | |
| 650 | 4 | |a Formation des modèles (Biologie) | |
| 650 | 4 | |a Pattern formation (Biology) | |
| 650 | 4 | |a Zebra danio |x Development | |
| 650 | 4 | |a Zebrafish |x embryology | |
| 650 | 4 | |a Zebrafish |x growth & development | |
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Record in the Search Index
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|---|---|
| adam_text | Contents
I. Germ Layer Formation and Early Patterning
Formation and Patterning Roles of the Yolk Syncytial Layer
Takuya Sakaguchi, Toshiro Mizuno, Hiroyuki Takeda
1 Introduction 1
2 Formation of the YSL 3
3 Epibolic Movement and the YSL 5
4 Dorsal Determinants in Teleost Yolk Cell 6
5 Determinants Function in the YSL and Dorsal Blastomeres 8
6 The Role of the YSL in Mesoderm and Endoderm Formation 11
7 Localized Inducing Activities Within the YSL 12
8 Is Visceral Endoderm in Mammal Equivalent to Teleost YSL? 12
9 Searching for Genes Specifically Expressed in the YSL 14
Mesoderm Induction and Patterning
David Kimelman, Alexander F. Schier
1 The Origin of Mesoderm 15
2 Induction of Mesoderm by Intercellular Signals 17
3 Nodal Signaling 19
4 Dorsal Ventral Patterning of the Mesoderm 21
5 Anterior Posterior Patterning of the Mesoderm 24
6 Wnt Signals in Mesoderm Patterning 26
7 Future Directions 27
The Guts of Endoderm Formation
Rachel M. Warga, Didier Y. R. Stainier
1 Endoderm Formation During the Blastula Period 28
1.1 Location of Endodermal Progenitors 28
1.2 Early Topographic Map of Endodermal Organs 29
1.3 Organs of Ambiguity: the Hypochord and Forerunner Cells ... 30
1.4 Cell Behavior of Endodermal Progenitors 31
1.5 Genes Involved in Endoderm Formation 31
1.6 The Nodal Factors and Cofactors: Cyclops, Squint,
and One Eyed Pinhead 31
X Contents
1.7 Nodal Versus Bmp Activity 32
1.8 Nodal Independent, Oep Dependent Cell Motility 33
1.8.1 Oep as a Component of EGF Signaling 33
1.9 Effectors of Nodal Signaling: Casanova, Bonnie
and Clyde, and Faust 34
1.9.1 The Endodermal Phenotypes of cas, bon and fau
Mutants and the Expression of These Genes in
the Blastula 34
1.9.2 Cas Is Sufficient To Convert Mesoderm
into Endoderm 36
1.10 A Molecular Pathway Leading to Endoderm Formation 37
2 Endoderm Formation During the Gastrula Period • 39
2.1 Formation of the Endodermal Layer 39
2.2 Spatial Allocation of Endodermal Precursors 39
2.3 Genes Involved in Endoderm Formation:
cas, bon, and fau Revisited 41
2.3.1 Cas May Regulate soxl7 Directly 42
2.3.2 The Fox/Forkhead Transcription Factors 42
2.3.3 Other Genes Expressed in the Endoderrn 43
2.4 Regional Expression in the Endoderm at the End
of Gastrulation 43
2.5 Further Thoughts on Endodermal Patterning 45
3 Pharyngeal Pouch Endoderm Versus Digestive Tract Endoderm .. 46
4 Conclusions and Prospects 47
Organizer Formation and Function
Masahiko Hibi, Toshio Hirano, Igor B. Dawid
1 Introduction 48
2 Dorsal Determinants and the Maternal Wnt Signal 50
2.1 Dorsal Determinants 50
2.2 A Maternally Derived Signal Activating the Wnt Pathway .... 51
3 The Nieuwkoop Center and Organizer Induction 54
3.1 Non cell autonomous Induction of the Organizer 54
3.2 bozozok/dharma 55
3.3 Nodal Related Genes, squint and cyclops 57
3.4 Cooperative Roles of boz/dha and sqt in the Induction
of the Organizer 60
3.5 vegalvox/vent 61
3.6 Induction by the Nieuwkoop Center Versus Cell Autonomous
Establishment of the Organizer 61
4 The Organizer 63
4.1 Is the Embryonic Shield the Fish Organizer? 63
4.2 Organizer Genes 64
4.3 chordino, nogginl, twisted gastrulation, and ogfin 65
Contents XI
4.4 dickkopfl 66
4.5. Fibroblast Growth Factors 66
4.6 Role of the Organizer in AP Patterning 67
5 Cell Movements and the Organizer 68
6 Summary and Prospects 70
Dorsoventral Patterning in the Zebrafish:
Bone Morphogenetic Proteins and Beyond
Matthias Hammerschmidt, Mary C. Mullins.
1 Dorsoventral Patterning in Frog, Fish and Fly 72
2 Mutant Analyses of Vertebrate DV Regulators 74
3 Zebrafish DV Mutants 75
4 Different Phases of DV Pattern Formation 79
4.1 Phase 1: Establishment of the Spemann Mangold Organizer .. 79
4.2 Phase 2: Establishment of the Morphogenetic Bmp Gradient .. 83
4.3 Phase 3: Morphogenetic Interpretation of the Gradient
by Target Cells 86
5 Implications of DV Patterning on the Anteroposterior Axis 90
6 Role of Chordin and Tolloid During Ventral Tail Development .... 91
7 Perspectives 93
Specification of Left Right Asymmetry
Christopher V.E. Wright, Marnie E. Halpern
1 Introduction 96
2 Mechanisms Underlying Left Right Patterning 97
3 Breaking Symmetry 97
4 Stabilizing, Propagating and Reinforcing Left Right Asymmetry .. 102
5 Transferring Left Right Information to the Organ Precursors 104
6 Effector Programs of Left Right Asymmetric Morphogenesis 107
7 Cardiac Left Right Asymmetry 108
8 Asymmetry of the Zebrafish Forebrain 110
9 Summary and Future Perspectives 113
II. Gastrulation Movements
Life at the Edge: Epiboly and Involution in the Zebrafish
Don Kane, Richard Adams
1 Introduction 117
2 Mid Blastula Transition and the Beginning of Cell Motility 119
3 Epiboly 120
4 The Epiboly Mutants 125
5 Towards a Unification of Vertebrate Epiboly 127
XII Contents
6 Hypoblast Formation 129
7 How Do Cells Internalize at the Margin:
Involution or Ingression? 133
8 Conclusions and Prospects? 135
Cellular and Genetic Mechanisms of Convergence and Extension
Lilianna Solnica Krezel, Mark S. Cooper
1 Introduction 136
2 Compaction at Blastula Stages 138
3 Distinct Domains of Convergence and Extension Movements
in the Zebrafish Gastrula 139
4 Cellular Behaviors Effecting Convergence
and Extension Movements 143
4.1 Epiboly and Anteriorward Mesendoderm Migration
Contribute to Convergence and Extension 144
4.2 Directed Migration Is a Key Cell Behavior Underlying
Convergence and Extension in Lateral Regions
of the Gastrula 146
4.3 Mediolateral Cell Intercalation Is a Key Cell Behavior
Underlying Convergence and Extension in Dorsal Regions
of the Gastrula 147
4.4 Cellular Segregation, Directed Migration and Mediolateral
Intercalation Underlie Dorsal Hypoblast Formation 148
5 Molecular Genetic Basis of Convergence
and Extension Movements 153
5.1 Wnt Planar Cell Polarity Pathway 154
5.2 Cell Adhesion Molecules 157
5.3 Slit 158
5.4 Eph Receptors and Ephrins 158
5.5 Calcium 159
5.6 Ethanol 159
6 Molecular Genetic Coordination of Convergence
and Extension Movements with Cell Fate Specification 160
6.1 Spadetail 160
6.2 Nodal 160
6.3 Bone Morphogenetic Proteins 161
6.4 Fibroblast Growth Factor 162
7 Role of C E Movements in Generating Embryonic Morphology .. 163
8 Future Directions 164
Primordial Germ Cell Development in Zebrafish
Erez Raz, Nancy Hopkins
1 Introduction 166
2 Specification of Germ Cells in Fish 167
Contents XIII
2.1 The Premolecular Markers Era 167
2.2 The Molecular Markers Era 169
3 PGC Migration in Zebrafish 172
4 Maintenance of the Fate of Migrating PGCs 176
5 PGC Development in Zebrafish as Compared
with That in Other Organisms 178
6 Conclusions and Future Directions 179
III. Neural Development
Patterning the Zebrafish Central Nervous System
Steve W. Wilson, Michael Brand, Judith S. Eisen
1 Introduction 181
2 Nervous System Morphogenesis 181
3 The Spinal Cord 182
3.1 Bmp Signaling Establishes DV Pattern in the Spinal Cord .... 184
3.2 Hedgehog and Nodal Pathways Pattern
the Ventral Spinal Cord 186
3.3 Delta/Notch Signaling Segregates Neural Fates Within
Neural Plate Domains 188
3.4 Later Signals May Refine Cell Identity 189
4 The Forebrain 190
4.1 DV Patterning of the Zebrafish Forebrain 193
4.1.1 Formation of the Hypothalamus 193
4.1.2 Establishment of the Optic Stalks 195
4.1.3 Establishment of Ventral Telencephalic Fates 197
4.1.4 Specification of Dorsal Forebrain Fates 197
4.2 Left/Right Patterning in the Brain 198
4.3 AP Patterning of the Prospective Brain 199
4.3.1 Establishment of Early AP Pattern in the Neural Plate . . 199
4.3.2 Local Induction of the Telencephalon and Eyes 201
5 The Midbrain and Hindbrain 202
5.1 Midbrain and Hindbrain Development Starts
in Gastrulation 203
5.1.1 Initial AP Subdivision of the Neural Plate 205
5.1.2 Wnt8 Signaling Positions the Midbrain
and Hindbrain 206
5.2 Wnts and Fgfs Maintain and Pattern the Midbrain
and Hindbrain 206
5.2.1 Polarization of the Midbrain 207
5.2.2 Fgf Signaling in the Rostral Hindbrain 208
5.2.3 Feedback Control of Fgf Signaling 208
5.2.4 Controlling Competence to Respond
to Fgf8 Signaling 209
XIV Contents
5.3 DV Patterning of the Midbrain and Isthmus 210
5.4 Later Steps of Patterning the Hindbrain 211
5.4.1 Dorsoventral Patterning 211
5.4.2 Forming and Maintaining Rhombomeres 212
5.4.3 Extrinsic Signals Controlling Segmentation 212
5.5 Secondary Modification of the Ground Plan
by Neuronal Migration 214
6 Summary 214
Specification of the Zebrafish Neural Crest
Robert N. Kelsh, David W. Raible
1 Introduction 216
1.1 Markers and Their Specificity 217
1.2 Zebrafish Neural Crest Mutants 222
2 Neural Crest Induction 222
3 Cell Fate Specification 223
3.1 When Does Specification Occur? 225
3.2 Progressive Fate Restriction 226
3.3 Pigment Cell Specification as a Model for Cell Fate Choice ... 227
4 Regional Specification 231
4.1 Pharyngeal Arch Specification 234
5 Summary 235
Neurogenesis and Specification of Neuronal Identity
Bruce Appel, Ajay Chitnis
1 Introduction 237
2 Zebrafish Spinal Cord Anatomy 237
2.1 Roof Plate 239
2.2 Rohon Beard Sensory Neurons 239
2.3 Interneurons 239
2.4 Motor Neurons 240
2.5 Floor Plate 240
2.6 Glia 241
3 Neurulation and the Early Pattern of Neurons 241
4 Regulation of Neurogenesis in the Zebrafish Neural Plate 242
5 Creating Proneuronal Domains: Regulation of ngnl Expression . .. 244
6 Dorsal Spinal Cord Development 246
7 Ventral Spinal Cord Development 247
8 Elaboration of Cell Fate Specification by Cell Cell Signaling 248
9 Neuronal Specification and Transcriptional Codes 249
10 Perspectives 251
Contents XV
Cellular, Genetic and Molecular Mechanisms
of Axon Guidance in the Zebrafish
Christine E. Beattie, Michael Granato, John Y. Kuwada
1 Introduction: Pathfinding Is Precise and Cell Specific 252
2 Axon Pathfinding in the Hindbrain and Spinal Cord 253
2.1 Redundant Cues Guide Growth Cones in the Spinal Cord .... 253
2.2 Molecules That Guide Spinal and Hindbrain Growth Cones ... 256
2.3 Mutations That Affect the Development of Neural Circuits
in the Hindbrain and Spinal Cord 259
3 Axonal Pathfinding by Spinal Motoneurons 260
3.1 Zebrafish Motor Axons Follow a Common Pathway
and Then Make Divergent Choices 260
3.2 Molecules That Guide Motor Growth Cones 261
3.2.1 Semaphorins 261
3.2.2 GDNF 262
3.2.3 Neurolin 262
3.3 Mutations That Disrupt the Formation
of Stereotyped Motor Projections 263
3.3.1 Diwanka Mutants 263
3.3.2 Unplugged Mutants 264
3.3.3 Stumpy Mutants 264
4 Axonal Pathfinding in the Visual System 265
5 Conclusions 268
IV. Aspects of Organogenesis
Somitogenesis
Caroline Brennan, Sharon L. Amacher, Peter D. Currie
1 Introduction 271
1.1 Generalized Overview of Somitogenesis 271
1.2 Morphological Aspects of Zebrafish Somitogenesis 272
2 General Anterior/Posterior Pattern and Specification
of Paraxial Mesoderm 273
2.1 Hox Gene Expression Patterns and Overall A/P Pattern 273
2.2 The Origin of Somitic Cells 274
2.3 spadetail, a Gene Controlling Paraxial Mesoderm
Formation 275
3 Establishing a Segmental Pattern 276
3.1 Somitic Periodicity and the Cell Cycle 277
3.2 Existence of a Molecular Oscillator 277
3.2.1 The Notch Pathway and Establishment
of Segmental Pattern 278
XVI Contents
3.2.2 Insights from Zebrafish 280
3.3 The Fused Somite Mutant and Operation of a Wavefront 281
3.4 Establishment of Anterior/Posterior Somite Polarity 282
4 Formation of the Somite Boundary 284
5 Induction and Patterning the Presomitic
and Somitic Mesoderm 286
5.1 Embryonic Myotome Formation and the Initiation
of Myogenesis 286
5.1.1 Formation of the Adaxial Cell Compartment
and Presomitic Myogenic Induction 286
5.1.2 Muscle Pioneer Cells and Myotomal Architecture 288
5.2 Fiber Type and Myotome Morphogenesis 289
5.2.1 Fiber Type Formation in Separate Myotomal
Compartments 289
5.2.2 Myotomal Patterning Mutants and the Molecular
Mechanisms Controlling Slow Muscle Cell
Specification 291
5.3 Migratory or Hypaxial Muscle Formation
in Zebrafish Embryos 292
5.4 Sclerotome Formation 294
5.5 Other Somite Derived Cell Types 295
6 Questions for the Future 296
Cardiovascular System
Deborah Yelon, Brant M. Weinstein, Mark C. Fishman
1 Introduction 298
1.1 Background in Classical Embryology:
Some of the Questions 299
2 Zebrafish: a Propitious Embryo for Cardiovascular Studies 300
3 Patterning the Heart 301
3.1 Formation of the Myocardium in Zebrafish 301
3.2 Genetic Regulation of Myocardial Development
in Zebrafish 307
3.2.1 Requirements for nkx2.5 Induction 308
3.2.2 Requirements for Myocardial Differentiation 311
3.2.3 Requirements for Chamber Specific Differentiation .... 312
3.2.4 Requirements for Heart Tube Assembly 313
4 Pattern and Orientation to the Onset of Function 314
5 Vascular Pattern in the Zebrafish 315
5.1 Formation of Blood Vessels in the Zebrafish 316
5.2 Molecular Analysis of Blood Vessel Formation
in the Zebrafish 317
5.3 Genetic Analysis of Blood Vessel Formation
in the Zebrafish 318
Contents XVII
5.4 Experimental Analysis of Vascular Form and Function:
Imaging Blood Vessels In Situ 320
6 Prospects for Future Zebrafish Cardiovascular Research 320
The Pronephros
Iain Drummond
1 Introduction 322
1.1 Variation and Evolution of the Kidney 322
1.2 A Brief History of the Kidney 326
2 Morphogenesis and Patterning of the Zebrafish Pronephros 326
2.1 Patterning of the Mesoderm and Formation
of the Pronephric Primordium 326
2.2 Mediolateral Patterning of the Intermediate Mesoderm
and Induction of the Pronephros 329
2.3 Development of the Pronephric Duct 334
2.4 Nephron Formation 336
2.5 Cell Interactions in the Vascularization of the Glomerulus .... 337
3 Summary and Perspectives 344
The Zebrafish Eye: Developmental and Genetic Analysis
Stephen S. Easter, Jr., Jarema J. Malicki
1 Introduction 346
2 Morphogenesis 347
2.1 Optic Vesicle 347
2.2 Eye Cup 348
2.3 Lens 351
3 Neurogenesis 352
3.1 The Fan Gradient 352
3.2 Ganglion Cell Layer 353
3.3 Inner Nuclear Layer 355
3.4 Outer Nuclear Layer 357
3.5 Prolonged Neurogenesis and Regeneration 358
3.6 Modulation of the Rate of Proliferation 361
3.7 Pulsatile Production of Neurons 361
4 Pattern and Patterning of Cellular Architecture in the Retina 362
4.1 Pattern of Differentiated Retina 362
4.2 Formation of Retinal Architecture 363
5 Terminal Differentiation of Cellular Morphology 366
5.1 Ganglion Cell Axogenesis 366
5.2 Photoreceptor Differentiation 367
6 Summary 370
References 371
Subject Index 431
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| callnumber-label | QH607 |
| callnumber-raw | QH607 QL638.C94 |
| callnumber-search | QH607 QL638.C94 |
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| callnumber-subject | QH - Natural History and Biology |
| classification_rvk | WX 6027 |
| ctrlnum | (OCoLC)49559036 (DE-599)BVBBV014392712 |
| dewey-full | 597/.482 |
| dewey-hundreds | 500 - Natural sciences and mathematics |
| dewey-ones | 597 - Cold-blooded vertebrates |
| dewey-raw | 597/.482 |
| dewey-search | 597/.482 |
| dewey-sort | 3597 3482 |
| dewey-tens | 590 - Animals |
| discipline | Biologie |
| format | Book |
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| genre | (DE-588)4143413-4 Aufsatzsammlung gnd-content |
| genre_facet | Aufsatzsammlung |
| id | DE-604.BV014392712 |
| illustrated | Illustrated |
| indexdate | 2024-07-09T19:02:20Z |
| institution | BVB |
| isbn | 354043576X |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-009852332 |
| oclc_num | 49559036 |
| open_access_boolean | |
| owner | DE-20 DE-11 |
| owner_facet | DE-20 DE-11 |
| physical | XVII, 438 S. Ill., graph. Darst. |
| publishDate | 2002 |
| publishDateSearch | 2002 |
| publishDateSort | 2002 |
| publisher | Springer |
| record_format | marc |
| series | Results and problems in cell differentiation |
| series2 | Results and problems in cell differentiation |
| spelling | Pattern formation in Zebrafish Lilianna Solnica-Krezel (ed.) Berlin [u.a.] Springer 2002 XVII, 438 S. Ill., graph. Darst. txt rdacontent n rdamedia nc rdacarrier Results and problems in cell differentiation 40 Literaturverz. S. 371 - 429 Danio zébré - Développement Formation des modèles (Biologie) Pattern formation (Biology) Zebra danio Development Zebrafish embryology Zebrafish growth & development Embryonalentwicklung (DE-588)4070792-1 gnd rswk-swf Zebrabärbling (DE-588)4079468-4 gnd rswk-swf Musterbildung (DE-588)4137934-2 gnd rswk-swf (DE-588)4143413-4 Aufsatzsammlung gnd-content Zebrabärbling (DE-588)4079468-4 s Embryonalentwicklung (DE-588)4070792-1 s Musterbildung (DE-588)4137934-2 s DE-604 Solnica-Krezel, Lilianna Sonstige oth Results and problems in cell differentiation 40 (DE-604)BV000022913 40 HBZ Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=009852332&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Pattern formation in Zebrafish Results and problems in cell differentiation Danio zébré - Développement Formation des modèles (Biologie) Pattern formation (Biology) Zebra danio Development Zebrafish embryology Zebrafish growth & development Embryonalentwicklung (DE-588)4070792-1 gnd Zebrabärbling (DE-588)4079468-4 gnd Musterbildung (DE-588)4137934-2 gnd |
| subject_GND | (DE-588)4070792-1 (DE-588)4079468-4 (DE-588)4137934-2 (DE-588)4143413-4 |
| title | Pattern formation in Zebrafish |
| title_auth | Pattern formation in Zebrafish |
| title_exact_search | Pattern formation in Zebrafish |
| title_full | Pattern formation in Zebrafish Lilianna Solnica-Krezel (ed.) |
| title_fullStr | Pattern formation in Zebrafish Lilianna Solnica-Krezel (ed.) |
| title_full_unstemmed | Pattern formation in Zebrafish Lilianna Solnica-Krezel (ed.) |
| title_short | Pattern formation in Zebrafish |
| title_sort | pattern formation in zebrafish |
| topic | Danio zébré - Développement Formation des modèles (Biologie) Pattern formation (Biology) Zebra danio Development Zebrafish embryology Zebrafish growth & development Embryonalentwicklung (DE-588)4070792-1 gnd Zebrabärbling (DE-588)4079468-4 gnd Musterbildung (DE-588)4137934-2 gnd |
| topic_facet | Danio zébré - Développement Formation des modèles (Biologie) Pattern formation (Biology) Zebra danio Development Zebrafish embryology Zebrafish growth & development Embryonalentwicklung Zebrabärbling Musterbildung Aufsatzsammlung |
| url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=009852332&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
| volume_link | (DE-604)BV000022913 |
| work_keys_str_mv | AT solnicakrezellilianna patternformationinzebrafish |