Genome mapping in plants:
Saved in:
| Main Author: | |
|---|---|
| Format: | Book |
| Language: | English |
| Published: |
San Diego, Calif. [u.a.]
Acad. Press [u.a.]
1996
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| Series: | Biotechnology intelligence unit
|
| Subjects: | |
| Online Access: | Inhaltsverzeichnis |
| Physical Description: | 330 S. Ill., graph. Darst. |
| ISBN: | 0125465904 1570593590 |
Staff View
MARC
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| 100 | 1 | |a Paterson, Andrew H. |e Verfasser |4 aut | |
| 245 | 1 | 0 | |a Genome mapping in plants |c Andrew H. Paterson |
| 264 | 1 | |a San Diego, Calif. [u.a.] |b Acad. Press [u.a.] |c 1996 | |
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| 650 | 4 | |a Cartes chromosomiques végétales | |
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Record in the Search Index
| _version_ | 1804125568884539393 |
|---|---|
| adam_text | BIOTECHNOLOGY
INTELLIGENCE
UNIT
GENOME MAPPING
IN PLANTS
Andrew H Paterson
Department of Soil and Crop Sciences
Texas A amp;M University
College Station, Texas, U S A
Academic Press
R G LANDES COMPANY
AUSTIN
CONTENTS
1 An Historical Perspective 1
Andrew H Paterson
1 1 What Is Genome Mapping? 1
1 2 The Pre-History of Genome Mapping 2
1 3 DNA: The Birth of Molecular Biology 3
1 4 Genome Mapping Fits into a Continuum
of Techniques for Gene Manipulation 4
1 5 What Are Some Practical Applications of Genome Mapping? 5
2 The DNA Revolution 7
Andrew H Paterson
2 1 Composition of a Genome 7
2 2 Molecular Dissection of a Genome 8
2 3 DNA Markers for Genome Analysis 19
2 4 Summary 19
3 Making Genetic Maps 23
Andrew H Paterson
3 1 Introduction 23
3 2 Molecular Basis of DNA Markers 24
3 3 Visualization of DNA Markers 24
3 4 Relationships Among DNA Markers Are Determined
by the Principles of Genetic Linkage 28
3 5 Choice of Genetic Mapping Populations 28
3 6 Genetic Distance 32
3 7 When Is the Map Complete? 33
3 8 How Is the Molecular Map Tied to the Cytological Map? 34
3 9 How Are the Genetic Maps of Different Taxa Related
to-One Another (Comparative Mapping)? 34
3 10 Summary 37
4 Mapping Genes Responsible for Differences in Phenotype 41
Andrew H Paterson
4 1 Why Map a Gene? 41
4 2 Monogenic Versus Polygenic Traits, and Discrete
Versus Continuous Variation 42
4 3 Genetic Maps as Tools for Cloning Genes 52
4 4 Summary 52
5 Physical Mapping and Map-Based Cloning:
Bridging the Gap Between DNA Markers and Genes 55
Andrew H Paterson
5 1 Physical Distance Between DNA Markers
in a Complete Genetic Map 55
5 2 Contigs 57
5 3 Local Enrichment for DNA Markers Helps to Fill the Gaps 59
5 4 Strategies for Gene Identification 59
5 5 Proof of Identity of a Candidate Gene 60
5 6 Summary 61
6 And With What Consequences? New Opportunities in Life
Sciences Research, Using a Genome-Based Approach 63
Andrew H Paterson
6 1 Unification of Biological Sciences Through
the Continuity of DNA 63
6 2 Association of Phenotypes with Genes: The Changing
Definition of a Model System 66
7 DNA Marker-Assisted Crop Improvement 71
Andrew H Paterson
7 1 Introduction 71
7 2 Progress Toward the Historical Objectives
of Crop Genome Analysis 72
7 3 Needs 75
7 4 Opportunities 77
7 5 Summary 79
8 Molecular Characterization for Plant Genetic Resources
Conservation 85
Stuart M Brown and Stephen Kresovich
8 1 Introduction 85
8 2 Curatorial Needs for Effective, Long-Term Conservation 86
8 3 Description of a Desirable Molecular Marker 87
8 4 Examples of Molecular Markers Useful
in Genetic Resources Characterization 88
8 5 Conclusions and Future Directions 91
9 DNA Fingerprinting and Plant Variety Protection 95
Stephen Smith and Tim Helentjaris
9 1 Introduction 95
9 2 Emergent Trends That Have Recently Spurred
the Increased Use of DNA Variety Profiling to Support IPP 96
9 3 Outline of Procedures and Requirements
for Obtaining IPP for Plant Varieties 96
9 4 Data That Are Used to Characterize Plant Varieties 97
9 5 Future Issues and Challenges in the Use
of DNA Variety Profiles to Help Support IPP 106
9 6 Conclusions 107
10 Applications of Repetitive DNA Sequences
in Plant Genome Analysis Ill
Xinping Zhao and Martin W Ganal
10 1 Introduction Ill
10 2 General Methods for Studying Repetitive DNA Sequences 112
10 3 Important Repetitive DNA Sequences
and Their Applications in Plant Genome Analysis 115
10 4 General Conclusions and Future Directions 121
11 Current Status and Potential of Fluorescence In Situ
Hybridization in Plant Genome Mapping 127
Jiming Jiang and Bikram S Gill
11 1 Introduction 127
11 2 Refinement of the FISH Technique 128
11 3 Genome Structure in Allopolyploid Species 128
11 4 Potential in Large Scale Physical Mapping 130
11 5 Potential in Fine Physical Mapping 131
12 Cloning of Plant-Genes Based on Genetic Map Location 137
Knut Meyer, Gregor Benning and Erwin Grill
12 1 Introduction 137
12 2 The Three Steps of Positional Cloning 139
12 3 Positional Cloning of the ABI1 Locus of Arabidopsis 146
12 4 Outlook 149
13 Cloning Genes by Insertion Mutagenesis 155
Matthew A Jenks and Kenneth A Feldmann
13 1 Insertion Mutagenesis: Introduction 155
13 2 Insertion Mutagenesis Using T-DNAs 155
13-3 Transposable Elements 161
13 4 Summary 164
14 Analysis of Gene Expression and Gene Isolation
by High-Throughput Sequencing of Plant cDNAs 169
Andrew N Nunberg, Zhongsen Li and Terry L Thomas
14 1 Introduction 169
14 2 Global cDNA Sequencing Strategies 171
14 3 Directed EST Screens to Identify Specific Genes 173
14 4 EST Screens to Identify Novel Arabidopsis Embryo Genes 174
14 5 Future Directions 174
15 The Compositae: Systematically Fascinating
but Specifically Neglected 179
Richard V Kesseli and Richard W Michelmore
15 1 Introduction 179
15 2 Origin and Genetic Diversity in Domesticated
Lettuce and Its Wild Relatives 181
15 3 Origin and Genetic Diversity of Domesticated Sunflower 181
15 4 Genetic Maps of Lactuca spp 182
15 5 Genetic Maps of Helianthus spp 183
15 6 Genetic Maps of Other Compositae Species 184
15 7 Genome Organization and Structure 184
15 8 Mapping of Phenotypic and Quantitative Trait Loci 186
15 9 Physical Mapping and Map-Based Cloning 187
15 10 Future Directions 188
16 Current Status of Genome Mapping in the Cruciferae 193
Wing Y Cheung and Benoit S Landry
16 1 Introduction 193
16 2 Genetic Mapping Using Molecular Markers 195
16 3 Comparative Mapping 198
16 4 Mapping of Phenotypes and Traits 202
16 5 Phylogenetic Studies Based on DNA Markers 203
16 6 Repetitive Sequences and Transposons in Brassica Species 204
16 7 Prospects for Physical Mapping and Map-Based Cloning 205
16 8 Future Prospects 206
17 Genome Mapping in Legumes (Fam Fabaceae) 211
Nevin D Young, Norman F Weeden and Gary Kochert
17 1 Introduction 211
17 2 Glycine, Phaseolus, and Vigna 212
17-3 Temperate Legumes 216
17 4 Arachis 220
17 5 Conclusion 223
18 Status of Genome Mapping in the Malvaceae (Cottons) 229
Andrew H Paterson, DavidM Stelly, Jonathan F Wendel
and XinpingZhao
18 1 Brief Description ofTaxon 229
18 2 Status of Genetic Map 230
18 3 Understanding of Genome Organization 234
18 4 Mapping of Agriculturally-
and Developmentally-Important Genes 235
18 5- Prospects for Map-Based Cloning 237
18 6 Likely Directions of Future Research 239
19 Genome Mapping in Temperate Grains and Grasses
in the Family Gramineae (Poaceae) 243
James C Nelson, Jorge Dubcovsky, Susan R McCouch
and Mark E Sorrells
19 1 Taxonomy and Cytology 243
19 2 Status of the Genetic Maps 244
19 3 Genome Organization in Cereals 250
19 4 Comparative Mapping in the Grasses 254
19 5 Aligning Genetic and Morphological Maps
and Searching for Quantitative Trait Loci (QTLs) 254
19 6 Status of Physical Map 255
19 7 DNA Marker Development 256
19 8 Prospects for Future Research and Applications 257
20 Status of Genome Mapping in the Tropical Grains
and Grasses (Poaceae) 267
Andrew H Paterson, Sin-Chieh Liu, Yann-rong Lin and Charlene Chang
20 1 Introduction 267
20 2 Origin and Domestication of Maize 267
20 3 Origin and Domestication of Sorghum 269
20 4 Origin and Domestication of Sugarcane 271
20 5 Comparative Mapping of Tropical Grasses 272
21 Status of Genome Mapping Tools in the Taxon Solonaceae 281
Klaus Pillen, Omaira Pineda, Candice B Lewis and Steven D Tanksley
21 1 Genome Mapping in Lycopersicon (Tomato) 281
21 2 Genome Organization 287
21 3 Localization of Tomato Centromeres 288
21 4 Genetic Mapping of Tomato Phenotypes 288
21 5 Physical Mapping and Map-Based Cloning 290
21 6 Genome Mapping in Solanum (Potato) 294
21 7 Genetic Mapping of Potato Phenotypes 298
21 8 Genome Mapping in Capsicum (Pepper) 299
21 9 Prospects 301
22 Genome Mapping in Gymnosperms: A Case Study
in Loblolly Pine (Pinus taeda L ) 309
David B Neale and Ronald R Sederojf
22 1 Introduction 309
22 2 Pine Genome Organization 310
22 3 Genetic Maps 311
22 4 Phenotype Mapping in Loblolly Pine 313
22 5 Map-Based Cloning in Pine 315
22 6 Directions for Future Research 315
Index 321
|
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| dewey-tens | 580 - Plants |
| discipline | Biologie |
| format | Book |
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| illustrated | Illustrated |
| indexdate | 2024-07-09T18:03:38Z |
| institution | BVB |
| isbn | 0125465904 1570593590 |
| language | English |
| oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-007421379 |
| oclc_num | 34564875 |
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| physical | 330 S. Ill., graph. Darst. |
| publishDate | 1996 |
| publishDateSearch | 1996 |
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| publisher | Acad. Press [u.a.] |
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| series2 | Biotechnology intelligence unit |
| spelling | Paterson, Andrew H. Verfasser aut Genome mapping in plants Andrew H. Paterson San Diego, Calif. [u.a.] Acad. Press [u.a.] 1996 330 S. Ill., graph. Darst. txt rdacontent n rdamedia nc rdacarrier Biotechnology intelligence unit Cartes chromosomiques végétales Plant genome mapping Pflanzen (DE-588)4045539-7 gnd rswk-swf Genkartierung (DE-588)4123274-4 gnd rswk-swf Genkartierung (DE-588)4123274-4 s Pflanzen (DE-588)4045539-7 s DE-604 HEBIS Datenaustausch application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=007421379&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
| spellingShingle | Paterson, Andrew H. Genome mapping in plants Cartes chromosomiques végétales Plant genome mapping Pflanzen (DE-588)4045539-7 gnd Genkartierung (DE-588)4123274-4 gnd |
| subject_GND | (DE-588)4045539-7 (DE-588)4123274-4 |
| title | Genome mapping in plants |
| title_auth | Genome mapping in plants |
| title_exact_search | Genome mapping in plants |
| title_full | Genome mapping in plants Andrew H. Paterson |
| title_fullStr | Genome mapping in plants Andrew H. Paterson |
| title_full_unstemmed | Genome mapping in plants Andrew H. Paterson |
| title_short | Genome mapping in plants |
| title_sort | genome mapping in plants |
| topic | Cartes chromosomiques végétales Plant genome mapping Pflanzen (DE-588)4045539-7 gnd Genkartierung (DE-588)4123274-4 gnd |
| topic_facet | Cartes chromosomiques végétales Plant genome mapping Pflanzen Genkartierung |
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