The science and applications of microbial genomics :: workshop summary /
On June 12 and 13, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats convened a public workshop in Washington, DC, to discuss the scientific tools and approaches being used for detecting and characterizing microbial species, and the roles of microbial genomics and metage...
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Format: | Elektronisch Tagungsbericht E-Book |
Sprache: | English |
Veröffentlicht: |
Washington, D.C. :
The National Academies Press,
[2013]
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Schriftenreihe: | Online access: NCBI NCBI Bookshelf.
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Schlagworte: | |
Online-Zugang: | Volltext |
Zusammenfassung: | On June 12 and 13, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats convened a public workshop in Washington, DC, to discuss the scientific tools and approaches being used for detecting and characterizing microbial species, and the roles of microbial genomics and metagenomics to better understand the culturable and unculturable microbial world around us. Through invited presentations and discussions, participants examined the use of microbial genomics to explore the diversity, evolution, and adaptation of microorganisms in a wide variety of environments; the molecular mechanisms of disease emergence and epidemiology; and the ways that genomic technologies are being applied to disease outbreak trace back and microbial surveillance. Points that were emphasized by many participants included the need to develop robust standardized sampling protocols, the importance of having the appropriate metadata (e.g., the sequencing platform used, sampling information, culture conditions), data analysis and data management challenges, and information sharing in real time. |
Beschreibung: | Title from PDF title page. |
Beschreibung: | 1 online resource (1 PDF file (xxiv, 403 pages)) : illustrations |
Bibliographie: | Includes bibliographical references. |
ISBN: | 9780309268196 0309268192 9780309268202 0309268206 |
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100 | 1 | |a Choffnes, Eileen R., |e author. |0 http://id.loc.gov/authorities/names/no2009177696 | |
245 | 1 | 4 | |a The science and applications of microbial genomics : |b workshop summary / |c Eileen R. Choffnes, LeighAnne Olsen, and Theresa Wizemann, rapporteurs ; Forum on Microbial Threats, Board on Global Health, Institute of Medicine of the National Academies. |
264 | 1 | |a Washington, D.C. : |b The National Academies Press, |c [2013] | |
300 | |a 1 online resource (1 PDF file (xxiv, 403 pages)) : |b illustrations | ||
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500 | |a Title from PDF title page. | ||
504 | |a Includes bibliographical references. | ||
520 | 3 | |a On June 12 and 13, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats convened a public workshop in Washington, DC, to discuss the scientific tools and approaches being used for detecting and characterizing microbial species, and the roles of microbial genomics and metagenomics to better understand the culturable and unculturable microbial world around us. Through invited presentations and discussions, participants examined the use of microbial genomics to explore the diversity, evolution, and adaptation of microorganisms in a wide variety of environments; the molecular mechanisms of disease emergence and epidemiology; and the ways that genomic technologies are being applied to disease outbreak trace back and microbial surveillance. Points that were emphasized by many participants included the need to develop robust standardized sampling protocols, the importance of having the appropriate metadata (e.g., the sequencing platform used, sampling information, culture conditions), data analysis and data management challenges, and information sharing in real time. | |
536 | |a Financial support for this project was provided by the U.S. Department of Health and Human Services: National Institutes of Health, National Institute of Allergy and Infectious Diseases, Centers for Disease Control and Prevention, and the Food and Drug Administration; U.S. Department of Defense, Department of the Army: Global Emerging Infections Surveillance and Response System, Medical Research and Materiel Command, and the Defense Threat Reduction Agency; U.S. Department of Veterans Affairs; U.S. Department of Homeland Security; U.S. Agency for International Development; Uniformed Services University of the Health Sciences; the Alfred P. Sloan Foundation, American Society for Microbiology; sanofi pasteur; Burroughs Wellcome Fund; GlaxoSmithKline; Infectious Diseases Society of America; and the Merck Company Foundation. | ||
588 | 0 | |a Online version viewed: Dec. 11, 2013. | |
505 | 0 | |a Workshop overview -- Contributed manuscripts -- The microbial forensics pathway for use of massively parallel sequencing technologies -- Microbial virulence as an emergent property: consequences and opportunities -- Microbial genome sequencing to understand pathogen transmission -- Presence of oseltamivir-resistant pandemic A/H1N1 minor variants before drug therapy with subsequent selection and transmission -- Design considerations for home and hospital microbiome studies -- Sequencing errors, diversity estimates, and the rare biosphere -- Phylogeography and molecular epidemiology of Yersinia pestis in Madagascar -- Big data in biology: pitfalls when using shotgun metagenomics to define hypotheses about microbial communities -- High-throughput bacterial genome sequencing: embarrassment of choice, a world of opportunity -- Evidence for several waves of global transmission in the seventh cholera pandemic -- Multi-partner interactions in corals in the face of climate -- Change genomic transition to pathogenicity in chytrid fungi -- Natural and experimental infection of Caenorhabditis nematodes by novel viruses related to nodaviruses -- Genomic approaches to studying the human microbiota -- Sequence analysis of the human virome in febrile and afebrile children. | |
546 | |a English. | ||
650 | 0 | |a Metagenomics. |0 http://id.loc.gov/authorities/subjects/sh2012000572 | |
650 | 0 | |a Microbial genomics. |0 http://id.loc.gov/authorities/subjects/sh2003001301 | |
650 | 0 | |a Communicable diseases. | |
650 | 0 | |a Microbial genetics. |0 http://id.loc.gov/authorities/subjects/sh85084760 | |
650 | 1 | 2 | |a Genetics, Microbial |
650 | 1 | 2 | |a Genome, Microbial |
650 | 2 | |a Communicable Diseases |0 https://id.nlm.nih.gov/mesh/D003141 | |
650 | 2 | 2 | |a Metagenomics |
650 | 2 | 2 | |a Microbiological Phenomena |x genetics |
650 | 6 | |a Métagénomique. | |
650 | 6 | |a Génomique microbienne. | |
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650 | 7 | |a Communicable diseases |2 fast | |
650 | 7 | |a Metagenomics |2 fast | |
650 | 7 | |a Microbial genomics |2 fast | |
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700 | 1 | |a Olsen, LeighAnne, |e author. |0 http://id.loc.gov/authorities/names/n2007181678 | |
700 | 1 | |a Wizemann, Theresa M., |e author. | |
710 | 2 | |a Institute of Medicine (U.S.). |b Forum on Microbial Threats, |e sponsoring body. |0 http://id.loc.gov/authorities/names/n2004120228 | |
711 | 2 | |a Workshop on the Science and Applications of Microbial Genomics |d (2012 : |c Washington, D.C.) |0 http://id.loc.gov/authorities/names/n2014184946 | |
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author | Choffnes, Eileen R. Olsen, LeighAnne Wizemann, Theresa M. |
author_GND | http://id.loc.gov/authorities/names/no2009177696 http://id.loc.gov/authorities/names/n2007181678 |
author_corporate | Workshop on the Science and Applications of Microbial Genomics |
author_corporate_role | |
author_facet | Choffnes, Eileen R. Olsen, LeighAnne Wizemann, Theresa M. Workshop on the Science and Applications of Microbial Genomics |
author_role | aut aut aut |
author_sort | Choffnes, Eileen R. |
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contents | Workshop overview -- Contributed manuscripts -- The microbial forensics pathway for use of massively parallel sequencing technologies -- Microbial virulence as an emergent property: consequences and opportunities -- Microbial genome sequencing to understand pathogen transmission -- Presence of oseltamivir-resistant pandemic A/H1N1 minor variants before drug therapy with subsequent selection and transmission -- Design considerations for home and hospital microbiome studies -- Sequencing errors, diversity estimates, and the rare biosphere -- Phylogeography and molecular epidemiology of Yersinia pestis in Madagascar -- Big data in biology: pitfalls when using shotgun metagenomics to define hypotheses about microbial communities -- High-throughput bacterial genome sequencing: embarrassment of choice, a world of opportunity -- Evidence for several waves of global transmission in the seventh cholera pandemic -- Multi-partner interactions in corals in the face of climate -- Change genomic transition to pathogenicity in chytrid fungi -- Natural and experimental infection of Caenorhabditis nematodes by novel viruses related to nodaviruses -- Genomic approaches to studying the human microbiota -- Sequence analysis of the human virome in febrile and afebrile children. |
ctrlnum | (OCoLC)837646089 |
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dewey-ones | 572 - Biochemistry |
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dewey-search | 572.8/629 |
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dewey-tens | 570 - Biology |
discipline | Biologie |
format | Electronic Conference Proceeding eBook |
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genre_facet | Congress proceedings (reports) Conference papers and proceedings Conference papers and proceedings. Actes de congrès. |
id | ZDB-4-EBA-ocn837646089 |
illustrated | Illustrated |
indexdate | 2024-11-27T13:25:17Z |
institution | BVB |
institution_GND | http://id.loc.gov/authorities/names/n2004120228 http://id.loc.gov/authorities/names/n2014184946 |
isbn | 9780309268196 0309268192 9780309268202 0309268206 |
language | English |
oclc_num | 837646089 |
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physical | 1 online resource (1 PDF file (xxiv, 403 pages)) : illustrations |
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publishDate | 2013 |
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publisher | The National Academies Press, |
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spelling | Choffnes, Eileen R., author. http://id.loc.gov/authorities/names/no2009177696 The science and applications of microbial genomics : workshop summary / Eileen R. Choffnes, LeighAnne Olsen, and Theresa Wizemann, rapporteurs ; Forum on Microbial Threats, Board on Global Health, Institute of Medicine of the National Academies. Washington, D.C. : The National Academies Press, [2013] 1 online resource (1 PDF file (xxiv, 403 pages)) : illustrations text txt rdacontent computer c rdamedia online resource cr rdacarrier Title from PDF title page. Includes bibliographical references. On June 12 and 13, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats convened a public workshop in Washington, DC, to discuss the scientific tools and approaches being used for detecting and characterizing microbial species, and the roles of microbial genomics and metagenomics to better understand the culturable and unculturable microbial world around us. Through invited presentations and discussions, participants examined the use of microbial genomics to explore the diversity, evolution, and adaptation of microorganisms in a wide variety of environments; the molecular mechanisms of disease emergence and epidemiology; and the ways that genomic technologies are being applied to disease outbreak trace back and microbial surveillance. Points that were emphasized by many participants included the need to develop robust standardized sampling protocols, the importance of having the appropriate metadata (e.g., the sequencing platform used, sampling information, culture conditions), data analysis and data management challenges, and information sharing in real time. Financial support for this project was provided by the U.S. Department of Health and Human Services: National Institutes of Health, National Institute of Allergy and Infectious Diseases, Centers for Disease Control and Prevention, and the Food and Drug Administration; U.S. Department of Defense, Department of the Army: Global Emerging Infections Surveillance and Response System, Medical Research and Materiel Command, and the Defense Threat Reduction Agency; U.S. Department of Veterans Affairs; U.S. Department of Homeland Security; U.S. Agency for International Development; Uniformed Services University of the Health Sciences; the Alfred P. Sloan Foundation, American Society for Microbiology; sanofi pasteur; Burroughs Wellcome Fund; GlaxoSmithKline; Infectious Diseases Society of America; and the Merck Company Foundation. Online version viewed: Dec. 11, 2013. Workshop overview -- Contributed manuscripts -- The microbial forensics pathway for use of massively parallel sequencing technologies -- Microbial virulence as an emergent property: consequences and opportunities -- Microbial genome sequencing to understand pathogen transmission -- Presence of oseltamivir-resistant pandemic A/H1N1 minor variants before drug therapy with subsequent selection and transmission -- Design considerations for home and hospital microbiome studies -- Sequencing errors, diversity estimates, and the rare biosphere -- Phylogeography and molecular epidemiology of Yersinia pestis in Madagascar -- Big data in biology: pitfalls when using shotgun metagenomics to define hypotheses about microbial communities -- High-throughput bacterial genome sequencing: embarrassment of choice, a world of opportunity -- Evidence for several waves of global transmission in the seventh cholera pandemic -- Multi-partner interactions in corals in the face of climate -- Change genomic transition to pathogenicity in chytrid fungi -- Natural and experimental infection of Caenorhabditis nematodes by novel viruses related to nodaviruses -- Genomic approaches to studying the human microbiota -- Sequence analysis of the human virome in febrile and afebrile children. English. Metagenomics. http://id.loc.gov/authorities/subjects/sh2012000572 Microbial genomics. http://id.loc.gov/authorities/subjects/sh2003001301 Communicable diseases. Microbial genetics. http://id.loc.gov/authorities/subjects/sh85084760 Genetics, Microbial Genome, Microbial Communicable Diseases https://id.nlm.nih.gov/mesh/D003141 Metagenomics Microbiological Phenomena genetics Métagénomique. Génomique microbienne. Maladies infectieuses. Génétique microbienne. SCIENCE Life Sciences Biochemistry. bisacsh Microbial genetics fast Communicable diseases fast Metagenomics fast Microbial genomics fast Congress https://id.nlm.nih.gov/mesh/D016423 proceedings (reports) aat Conference papers and proceedings fast Conference papers and proceedings. lcgft http://id.loc.gov/authorities/genreForms/gf2014026068 Actes de congrès. rvmgf Olsen, LeighAnne, author. http://id.loc.gov/authorities/names/n2007181678 Wizemann, Theresa M., author. Institute of Medicine (U.S.). Forum on Microbial Threats, sponsoring body. http://id.loc.gov/authorities/names/n2004120228 Workshop on the Science and Applications of Microbial Genomics (2012 : Washington, D.C.) http://id.loc.gov/authorities/names/n2014184946 Online version: Science and applications of microbial genomics. Washington, D.C. : The National Academies Press, [2013] 9780309268196 (OCoLC)843098196 Online access: NCBI NCBI Bookshelf. FWS01 ZDB-4-EBA FWS_PDA_EBA https://search.ebscohost.com/login.aspx?direct=true&scope=site&db=nlebk&AN=867982 Volltext |
spellingShingle | Choffnes, Eileen R. Olsen, LeighAnne Wizemann, Theresa M. The science and applications of microbial genomics : workshop summary / Online access: NCBI NCBI Bookshelf. Workshop overview -- Contributed manuscripts -- The microbial forensics pathway for use of massively parallel sequencing technologies -- Microbial virulence as an emergent property: consequences and opportunities -- Microbial genome sequencing to understand pathogen transmission -- Presence of oseltamivir-resistant pandemic A/H1N1 minor variants before drug therapy with subsequent selection and transmission -- Design considerations for home and hospital microbiome studies -- Sequencing errors, diversity estimates, and the rare biosphere -- Phylogeography and molecular epidemiology of Yersinia pestis in Madagascar -- Big data in biology: pitfalls when using shotgun metagenomics to define hypotheses about microbial communities -- High-throughput bacterial genome sequencing: embarrassment of choice, a world of opportunity -- Evidence for several waves of global transmission in the seventh cholera pandemic -- Multi-partner interactions in corals in the face of climate -- Change genomic transition to pathogenicity in chytrid fungi -- Natural and experimental infection of Caenorhabditis nematodes by novel viruses related to nodaviruses -- Genomic approaches to studying the human microbiota -- Sequence analysis of the human virome in febrile and afebrile children. Metagenomics. http://id.loc.gov/authorities/subjects/sh2012000572 Microbial genomics. http://id.loc.gov/authorities/subjects/sh2003001301 Communicable diseases. Microbial genetics. http://id.loc.gov/authorities/subjects/sh85084760 Genetics, Microbial Genome, Microbial Communicable Diseases https://id.nlm.nih.gov/mesh/D003141 Metagenomics Microbiological Phenomena genetics Métagénomique. Génomique microbienne. Maladies infectieuses. Génétique microbienne. SCIENCE Life Sciences Biochemistry. bisacsh Microbial genetics fast Communicable diseases fast Metagenomics fast Microbial genomics fast |
subject_GND | http://id.loc.gov/authorities/subjects/sh2012000572 http://id.loc.gov/authorities/subjects/sh2003001301 http://id.loc.gov/authorities/subjects/sh85084760 https://id.nlm.nih.gov/mesh/D003141 https://id.nlm.nih.gov/mesh/D016423 http://id.loc.gov/authorities/genreForms/gf2014026068 |
title | The science and applications of microbial genomics : workshop summary / |
title_auth | The science and applications of microbial genomics : workshop summary / |
title_exact_search | The science and applications of microbial genomics : workshop summary / |
title_full | The science and applications of microbial genomics : workshop summary / Eileen R. Choffnes, LeighAnne Olsen, and Theresa Wizemann, rapporteurs ; Forum on Microbial Threats, Board on Global Health, Institute of Medicine of the National Academies. |
title_fullStr | The science and applications of microbial genomics : workshop summary / Eileen R. Choffnes, LeighAnne Olsen, and Theresa Wizemann, rapporteurs ; Forum on Microbial Threats, Board on Global Health, Institute of Medicine of the National Academies. |
title_full_unstemmed | The science and applications of microbial genomics : workshop summary / Eileen R. Choffnes, LeighAnne Olsen, and Theresa Wizemann, rapporteurs ; Forum on Microbial Threats, Board on Global Health, Institute of Medicine of the National Academies. |
title_short | The science and applications of microbial genomics : |
title_sort | science and applications of microbial genomics workshop summary |
title_sub | workshop summary / |
topic | Metagenomics. http://id.loc.gov/authorities/subjects/sh2012000572 Microbial genomics. http://id.loc.gov/authorities/subjects/sh2003001301 Communicable diseases. Microbial genetics. http://id.loc.gov/authorities/subjects/sh85084760 Genetics, Microbial Genome, Microbial Communicable Diseases https://id.nlm.nih.gov/mesh/D003141 Metagenomics Microbiological Phenomena genetics Métagénomique. Génomique microbienne. Maladies infectieuses. Génétique microbienne. SCIENCE Life Sciences Biochemistry. bisacsh Microbial genetics fast Communicable diseases fast Metagenomics fast Microbial genomics fast |
topic_facet | Metagenomics. Microbial genomics. Communicable diseases. Microbial genetics. Genetics, Microbial Genome, Microbial Communicable Diseases Metagenomics Microbiological Phenomena genetics Métagénomique. Génomique microbienne. Maladies infectieuses. Génétique microbienne. SCIENCE Life Sciences Biochemistry. Microbial genetics Communicable diseases Microbial genomics Congress proceedings (reports) Conference papers and proceedings Conference papers and proceedings. Actes de congrès. |
url | https://search.ebscohost.com/login.aspx?direct=true&scope=site&db=nlebk&AN=867982 |
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